RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 GATSQ8NAP1 163 aa24.44■■□□□ 1.5
SSU72-201ENST00000291386 CLEC18CQ8NCF0 446 aa24.44■■□□□ 1.5
SSU72-201ENST00000291386 SLC38A5Q8WUX1 472 aa24.44■■□□□ 1.5
SSU72-201ENST00000291386 RELTQ969Z4 430 aa24.44■■□□□ 1.5
SSU72-201ENST00000291386 C1GALT1C1Q96EU7 318 aa24.44■■□□□ 1.5
SSU72-201ENST00000291386 IKZF5Q9H5V7 419 aa24.44■■□□□ 1.5
SSU72-201ENST00000291386 RUBCNLQ9H714 662 aa24.44■■□□□ 1.5
SSU72-201ENST00000291386 EXO5Q9H790 373 aa24.44■■□□□ 1.5
SSU72-201ENST00000291386 MTHFD2LQ9H903 347 aaPredicted RBP24.44■■□□□ 1.5
SSU72-201ENST00000291386 SPRR3Q9UBC9 169 aa24.44■■□□□ 1.5
SSU72-201ENST00000291386 ARL2BPQ9Y2Y0 163 aa24.44■■□□□ 1.5
SSU72-201ENST00000291386 DSPPQ9NZW4 1301 aa24.43■■□□□ 1.5
SSU72-201ENST00000291386 SERINC4A6NH21 518 aa24.43■■□□□ 1.5
SSU72-201ENST00000291386 PRRG2O14669 202 aa24.43■■□□□ 1.5
SSU72-201ENST00000291386 ZIC3O60481 467 aa24.43■■□□□ 1.5
SSU72-201ENST00000291386 GLYR1Q49A26 553 aaPredicted RBP24.43■■□□□ 1.5
SSU72-201ENST00000291386 C4orf17Q53FE4 359 aa24.43■■□□□ 1.5
SSU72-201ENST00000291386 PRAMEF8Q5VWM4 474 aa24.43■■□□□ 1.5
SSU72-201ENST00000291386 PRAMEF7Q5VXH5 474 aa24.43■■□□□ 1.5
SSU72-201ENST00000291386 YRDCQ86U90 279 aaKnown RBP24.43■■□□□ 1.5
SSU72-201ENST00000291386 PHOSPHO1Q8TCT1 267 aa24.43■■□□□ 1.5
SSU72-201ENST00000291386 CCT8L2Q96SF2 557 aa24.43■■□□□ 1.5
SSU72-201ENST00000291386 TAS2R10Q9NYW0 307 aa24.43■■□□□ 1.5
SSU72-201ENST00000291386 DKKL1Q9UK85 242 aa24.43■■□□□ 1.5
SSU72-201ENST00000291386 GCN1Q92616 2671 aaKnown RBP24.43■■□□□ 1.5
SSU72-201ENST00000291386 CENPVL1A0A0U1RR11 272 aa24.42■■□□□ 1.5
SSU72-201ENST00000291386 TMEM247A6NEH6 219 aa24.42■■□□□ 1.5
SSU72-201ENST00000291386 AGAP5A6NIR3 686 aa24.42■■□□□ 1.5
SSU72-201ENST00000291386 MRASO14807 208 aa24.42■■□□□ 1.5
SSU72-201ENST00000291386 ZNHIT1O43257 154 aa24.42■■□□□ 1.5
SSU72-201ENST00000291386 EIF4E2O60573 245 aaKnown RBP24.42■■□□□ 1.5
SSU72-201ENST00000291386 FAM107AO95990 144 aa24.42■■□□□ 1.5
SSU72-201ENST00000291386 NUDT7P0C024 238 aa24.42■■□□□ 1.5
SSU72-201ENST00000291386 RPS4Y1P22090 263 aaKnown RBP24.42■■□□□ 1.5
SSU72-201ENST00000291386 CASP6P55212 293 aa24.42■■□□□ 1.5
SSU72-201ENST00000291386 FGFBP1Q14512 234 aa24.42■■□□□ 1.5
SSU72-201ENST00000291386 MAPK14Q16539 360 aa24.42■■□□□ 1.5
SSU72-201ENST00000291386 C3AR1Q16581 482 aa24.42■■□□□ 1.5
SSU72-201ENST00000291386 C10orf111Q8N326 155 aa24.42■■□□□ 1.5
SSU72-201ENST00000291386 PCYOX1LQ8NBM8 494 aa24.42■■□□□ 1.5
SSU72-201ENST00000291386 OR14L1PQ8NHC6 308 aa24.42■■□□□ 1.5
SSU72-201ENST00000291386 B4GALNT2Q8NHY0 566 aa24.42■■□□□ 1.5
SSU72-201ENST00000291386 ZG16BQ96DA0 208 aa24.42■■□□□ 1.5
SSU72-201ENST00000291386 TMEM19Q96HH6 336 aa24.42■■□□□ 1.5
SSU72-201ENST00000291386 TMEM38AQ9H6F2 299 aa24.42■■□□□ 1.5
SSU72-201ENST00000291386 RELNP78509 3460 aa24.41■■□□□ 1.5
SSU72-201ENST00000291386 A0A1B0GUH1 482 aa24.41■■□□□ 1.5
SSU72-201ENST00000291386 NPIPA2E9PIF3 369 aa24.41■■□□□ 1.5
SSU72-201ENST00000291386 NPIPA3F8WFD2 350 aa24.41■■□□□ 1.5
SSU72-201ENST00000291386 BCHEP06276 602 aa24.41■■□□□ 1.5
SSU72-201ENST00000291386 COX4I1P13073 169 aa24.41■■□□□ 1.5
SSU72-201ENST00000291386 SUMO3P55854 103 aaPredicted RBP24.41■■□□□ 1.5
SSU72-201ENST00000291386 GFRA1P56159 465 aa24.41■■□□□ 1.5
SSU72-201ENST00000291386 ZNF117Q03924 483 aa24.41■■□□□ 1.5
SSU72-201ENST00000291386 CRYZQ08257 329 aaKnown RBP24.41■■□□□ 1.5
SSU72-201ENST00000291386 GCNT6Q5T4J0 391 aa24.41■■□□□ 1.5
SSU72-201ENST00000291386 VASNQ6EMK4 673 aa24.41■■□□□ 1.5
SSU72-201ENST00000291386 DOLPP1Q86YN1 238 aa24.41■■□□□ 1.5
SSU72-201ENST00000291386 TREML1Q86YW5 311 aa24.41■■□□□ 1.5
SSU72-201ENST00000291386 ZNF614Q8N883 585 aa24.41■■□□□ 1.5
SSU72-201ENST00000291386 ANKS4BQ8N8V4 417 aa24.41■■□□□ 1.5
SSU72-201ENST00000291386 LRRC58Q96CX6 371 aa24.41■■□□□ 1.5
SSU72-201ENST00000291386 BCL2L10Q9HD36 194 aa24.41■■□□□ 1.5
SSU72-201ENST00000291386 ICAM5Q9UMF0 924 aa24.41■■□□□ 1.5
SSU72-201ENST00000291386 L3MBTL1Q9Y468 752 aa24.41■■□□□ 1.5
SSU72-201ENST00000291386 A0A087WZY1 265 aa24.4■■□□□ 1.5
SSU72-201ENST00000291386 TRGV8A0A0C4DH27 118 aa24.4■■□□□ 1.5
SSU72-201ENST00000291386 A0A0G2JPF8 293 aa24.4■■□□□ 1.5
SSU72-201ENST00000291386 HNRNPCL2B2RXH8 293 aa24.4■■□□□ 1.5
SSU72-201ENST00000291386 HNRNPCL3B7ZW38 293 aa24.4■■□□□ 1.5
SSU72-201ENST00000291386 FXYD1O00168 92 aa24.4■■□□□ 1.5
SSU72-201ENST00000291386 ZNF264O43296 627 aa24.4■■□□□ 1.5
SSU72-201ENST00000291386 HCRTR2O43614 444 aa24.4■■□□□ 1.5
SSU72-201ENST00000291386 HNRNPCL1O60812 293 aaKnown RBP24.4■■□□□ 1.5
SSU72-201ENST00000291386 ACTL6AO96019 429 aa24.4■■□□□ 1.5
SSU72-201ENST00000291386 TPOP07202 933 aa24.4■■□□□ 1.5
SSU72-201ENST00000291386 HNRNPCL4P0DMR1 293 aa24.4■■□□□ 1.5
SSU72-201ENST00000291386 ARAFP10398 606 aa24.4■■□□□ 1.5
SSU72-201ENST00000291386 BMP7P18075 431 aa24.4■■□□□ 1.5
SSU72-201ENST00000291386 HK1P19367 917 aa24.4■■□□□ 1.5
SSU72-201ENST00000291386 GCKP35557 465 aa24.4■■□□□ 1.5
SSU72-201ENST00000291386 P2RX1P51575 399 aa24.4■■□□□ 1.5
SSU72-201ENST00000291386 SRSF1Q07955 248 aaKnown RBP eCLIP24.4■■□□□ 1.5
SSU72-201ENST00000291386 GXYLT1Q4G148 440 aa24.4■■□□□ 1.5
SSU72-201ENST00000291386 EMC4Q5J8M3 183 aa24.4■■□□□ 1.5
SSU72-201ENST00000291386 IFNEQ86WN2 208 aa24.4■■□□□ 1.5
SSU72-201ENST00000291386 CMIPQ8IY22 773 aa24.4■■□□□ 1.5
SSU72-201ENST00000291386 TOR1AIP2Q8NFQ8 470 aa24.4■■□□□ 1.5
SSU72-201ENST00000291386 TREX2Q9BQ50 279 aaPredicted RBP24.4■■□□□ 1.5
SSU72-201ENST00000291386 LAT2Q9GZY6 243 aa24.4■■□□□ 1.5
SSU72-201ENST00000291386 ST6GALNAC1Q9NSC7 600 aaPredicted RBP24.4■■□□□ 1.5
SSU72-201ENST00000291386 GID8Q9NWU2 228 aa24.4■■□□□ 1.5
SSU72-201ENST00000291386 TINAGQ9UJW2 476 aa24.4■■□□□ 1.5
SSU72-201ENST00000291386 SLC5A6Q9Y289 635 aa24.4■■□□□ 1.5
SSU72-201ENST00000291386 SLC35A3Q9Y2D2 325 aa24.4■■□□□ 1.5
SSU72-201ENST00000291386 SLC6A5Q9Y345 797 aa24.4■■□□□ 1.5
SSU72-201ENST00000291386 C15orf38-AP3S2A0A0A6YYH1 394 aa24.39■■□□□ 1.49
SSU72-201ENST00000291386 GTPBP1O00178 669 aaKnown RBP24.39■■□□□ 1.49
SSU72-201ENST00000291386 DBIP07108 87 aaKnown RBP24.39■■□□□ 1.49
SSU72-201ENST00000291386 UBL4AP11441 157 aa24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms