RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 EFNA2O43921 213 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 CDC40O60508 579 aaKnown RBP eCLIP8.29□□□□□ -1.08
HMGN1-201ENST00000288344 KCNH1O95259 989 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 NTN1O95631 604 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 ANGPTL1O95841 491 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 EPPINO95925 133 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 HOXD4P09016 255 aaPredicted RBP8.29□□□□□ -1.08
HMGN1-201ENST00000288344 GP1BBP13224 206 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 MATN1P21941 496 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 CHMP24386 653 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 ACVR2AP27037 513 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 GDF1P27539 372 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 CEACAM8P31997 349 aaPredicted RBP8.29□□□□□ -1.08
HMGN1-201ENST00000288344 TRPC1P48995 793 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 LHX2P50458 406 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 ATP4BP51164 291 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 AQP5P55064 265 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 DLX5P56178 289 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 NME5P56597 212 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 CLDN18P56856 261 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 RPS26P62854 115 aaKnown RBP8.29□□□□□ -1.08
HMGN1-201ENST00000288344 C17orf67Q0P5P2 114 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 RCAN2Q14206 197 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 ZNHIT3Q15649 155 aaPredicted RBP8.29□□□□□ -1.08
HMGN1-201ENST00000288344 CD226Q15762 336 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 ZNF141Q15928 474 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 MAPK14Q16539 360 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 BCL2A1Q16548 175 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 GLYR1Q49A26 553 aaPredicted RBP8.29□□□□□ -1.08
HMGN1-201ENST00000288344 LRIF1Q5T3J3 769 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 HIST2H2BCQ6DN03 193 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 RPTNQ6XPR3 784 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 C3P1Q6ZMU1 363 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 MSANTD1Q6ZTZ1 278 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 MRGPRGQ86SM5 289 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 GALNT10Q86SR1 603 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 LIX1LQ8IVB5 337 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 ULK2Q8IYT8 1036 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 ZNF808Q8N4W9 903 aaPredicted RBP8.29□□□□□ -1.08
HMGN1-201ENST00000288344 FBXO30Q8TB52 745 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 POC1BQ8TC44 478 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 ZPLD1Q8TCW7 415 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 SARAFQ96BY9 339 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 C1GALT1C1Q96EU7 318 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 MARK4Q96L34 752 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 OR52E6Q96RD3 313 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 NMUR2Q9GZQ4 415 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 ZNF350Q9GZX5 532 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 PAIP1Q9H074 479 aaKnown RBP8.29□□□□□ -1.08
HMGN1-201ENST00000288344 TP63Q9H3D4 680 aaPredicted RBP8.29□□□□□ -1.08
HMGN1-201ENST00000288344 DSN1Q9H410 356 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 TCF7L2Q9NQB0 619 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 MED11Q9P086 117 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 SLAMF8Q9P0V8 285 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 PLEKHB1Q9UF11 243 aaPredicted RBP8.29□□□□□ -1.08
HMGN1-201ENST00000288344 ICAM5Q9UMF0 924 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 SLC6A5Q9Y345 797 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 SNX8Q9Y5X2 465 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 AKAP9Q99996 3911 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 RNF103-CHMP3A0A140T963 221 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 FAM234BA2RU67 622 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 C7orf72A4D263 438 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 DUXAA6NLW8 204 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 DIAPH2O60879 1101 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 ADAM11O75078 769 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 WDR1O75083 606 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 BCAS1O75363 584 aaPredicted RBP8.29□□□□□ -1.08
HMGN1-201ENST00000288344 UGT2B17O75795 530 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 CPSF4O95639 269 aaKnown RBP8.29□□□□□ -1.08
HMGN1-201ENST00000288344 ACTL6AO96019 429 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 LINGO3P0C6S8 592 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 ABOP16442 354 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 ZNF708P17019 499 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 IGFBP2P18065 325 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 COL8A1P27658 744 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 IL12BP29460 328 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 MAGEA8P43361 318 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 POLR2JP52435 117 aaKnown RBP8.29□□□□□ -1.08
HMGN1-201ENST00000288344 ATP12AP54707 1039 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 PSMD4P55036 377 aaKnown RBP8.29□□□□□ -1.08
HMGN1-201ENST00000288344 DSCR4P56555 118 aaPredicted RBP8.29□□□□□ -1.08
HMGN1-201ENST00000288344 NUP107P57740 925 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 IRX1P78414 480 aaPredicted RBP8.29□□□□□ -1.08
HMGN1-201ENST00000288344 POU6F2P78424 691 aaPredicted RBP8.29□□□□□ -1.08
HMGN1-201ENST00000288344 LRRC74AQ0VAA2 488 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 TP53BP2Q13625 1128 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 ZNF630Q2M218 657 aaPredicted RBP8.29□□□□□ -1.08
HMGN1-201ENST00000288344 PAGE3Q5JUK9 113 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 DCST2Q5T1A1 773 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 METTL21CQ5VZV1 264 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 TYW3Q6IPR3 259 aaKnown RBP8.29□□□□□ -1.08
HMGN1-201ENST00000288344 MTFR2Q6P444 385 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 CBLN3Q6UW01 205 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 DLEU7Q6UYE1 221 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 OLIG3Q7RTU3 272 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 MAMDC2Q7Z304 686 aaPredicted RBP8.29□□□□□ -1.08
HMGN1-201ENST00000288344 C10orf111Q8N326 155 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 FAM71CQ8NEG0 241 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 OR4A15Q8NGL6 344 aa8.29□□□□□ -1.08
HMGN1-201ENST00000288344 OR5M9Q8NGP3 310 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms