RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 LYPD8Q6UX82 237 aa17.07■□□□□ 0.32
PDLIM3-201ENST00000284767 ZER1Q7Z7L7 766 aa17.07■□□□□ 0.32
PDLIM3-201ENST00000284767 ASPGQ86U10 573 aa17.07■□□□□ 0.32
PDLIM3-201ENST00000284767 OR4K5Q8NGD3 323 aa17.07■□□□□ 0.32
PDLIM3-201ENST00000284767 ARHGAP9Q9BRR9 750 aa17.07■□□□□ 0.32
PDLIM3-201ENST00000284767 FNDC11Q9BVV2 318 aa17.07■□□□□ 0.32
PDLIM3-201ENST00000284767 FAIM2Q9BWQ8 316 aa17.07■□□□□ 0.32
PDLIM3-201ENST00000284767 ZCCHC3Q9NUD5 404 aaKnown RBP17.07■□□□□ 0.32
PDLIM3-201ENST00000284767 TAS2R7Q9NYW3 318 aa17.07■□□□□ 0.32
PDLIM3-201ENST00000284767 STMN3Q9NZ72 180 aa17.07■□□□□ 0.32
PDLIM3-201ENST00000284767 MRPS2Q9Y399 296 aaKnown RBP17.07■□□□□ 0.32
PDLIM3-201ENST00000284767 IGHV1OR15-9A0A0B4J2B8 117 aa17.06■□□□□ 0.32
PDLIM3-201ENST00000284767 A0A0X1KG70 313 aa17.06■□□□□ 0.32
PDLIM3-201ENST00000284767 SMIM30A4D0T7 59 aa17.06■□□□□ 0.32
PDLIM3-201ENST00000284767 ZNF860A6NHJ4 632 aa17.06■□□□□ 0.32
PDLIM3-201ENST00000284767 SGK494L7N484 410 aa17.06■□□□□ 0.32
PDLIM3-201ENST00000284767 TYRP1P17643 537 aa17.06■□□□□ 0.32
PDLIM3-201ENST00000284767 CFL1P23528 166 aaKnown RBP17.06■□□□□ 0.32
PDLIM3-201ENST00000284767 EVX1P49640 407 aa17.06■□□□□ 0.32
PDLIM3-201ENST00000284767 RRAS2P62070 204 aaPredicted RBP17.06■□□□□ 0.32
PDLIM3-201ENST00000284767 TRA2BP62995 288 aaKnown RBP17.06■□□□□ 0.32
PDLIM3-201ENST00000284767 KIR2DS3Q14952 304 aa17.06■□□□□ 0.32
PDLIM3-201ENST00000284767 SYPL1Q16563 259 aa17.06■□□□□ 0.32
PDLIM3-201ENST00000284767 BTBD16Q32M84 506 aa17.06■□□□□ 0.32
PDLIM3-201ENST00000284767 MINDY4Q4G0A6 757 aa17.06■□□□□ 0.32
PDLIM3-201ENST00000284767 DEFB134Q4QY38 66 aa17.06■□□□□ 0.32
PDLIM3-201ENST00000284767 FIGLAQ6QHK4 219 aa17.06■□□□□ 0.32
PDLIM3-201ENST00000284767 KCNJ15Q99712 375 aa17.06■□□□□ 0.32
PDLIM3-201ENST00000284767 WFDC6Q9BQY6 131 aa17.06■□□□□ 0.32
PDLIM3-201ENST00000284767 HRASLS2Q9NWW9 162 aa17.06■□□□□ 0.32
PDLIM3-201ENST00000284767 HCRTR1O43613 425 aa17.06■□□□□ 0.32
PDLIM3-201ENST00000284767 HPGDSO60760 199 aa17.06■□□□□ 0.32
PDLIM3-201ENST00000284767 OR2B3O76000 313 aa17.06■□□□□ 0.32
PDLIM3-201ENST00000284767 CTSEP14091 401 aa17.06■□□□□ 0.32
PDLIM3-201ENST00000284767 OR3A3P47888 321 aa17.06■□□□□ 0.32
PDLIM3-201ENST00000284767 RPS15AP62244 130 aaKnown RBP17.06■□□□□ 0.32
PDLIM3-201ENST00000284767 MAB21L1Q13394 359 aa17.06■□□□□ 0.32
PDLIM3-201ENST00000284767 IL18Q14116 193 aa17.06■□□□□ 0.32
PDLIM3-201ENST00000284767 MZT2AQ6P582 158 aa17.06■□□□□ 0.32
PDLIM3-201ENST00000284767 TMEM107Q6UX40 140 aa17.06■□□□□ 0.32
PDLIM3-201ENST00000284767 PRSS41Q7RTY9 318 aa17.06■□□□□ 0.32
PDLIM3-201ENST00000284767 FAM109AQ8N4B1 249 aa17.06■□□□□ 0.32
PDLIM3-201ENST00000284767 SUN5Q8TC36 379 aa17.06■□□□□ 0.32
PDLIM3-201ENST00000284767 XAGE5Q8WWM1 108 aa17.06■□□□□ 0.32
PDLIM3-201ENST00000284767 SLC22A18Q96BI1 424 aa17.06■□□□□ 0.32
PDLIM3-201ENST00000284767 ATF6BQ99941 703 aa17.06■□□□□ 0.32
PDLIM3-201ENST00000284767 TREX2Q9BQ50 279 aaPredicted RBP17.06■□□□□ 0.32
PDLIM3-201ENST00000284767 B3GAT2Q9NPZ5 323 aa17.06■□□□□ 0.32
PDLIM3-201ENST00000284767 ACSS1Q9NUB1 689 aaPredicted RBP17.06■□□□□ 0.32
PDLIM3-201ENST00000284767 NLKQ9UBE8 527 aa17.06■□□□□ 0.32
PDLIM3-201ENST00000284767 CES1P1Q9UKY3 287 aa17.06■□□□□ 0.32
PDLIM3-201ENST00000284767 B4DGG1 531 aa17.05■□□□□ 0.32
PDLIM3-201ENST00000284767 SLC28A2O43868 658 aa17.05■□□□□ 0.32
PDLIM3-201ENST00000284767 WNT1P04628 370 aa17.05■□□□□ 0.32
PDLIM3-201ENST00000284767 MTNR1AP48039 350 aa17.05■□□□□ 0.32
PDLIM3-201ENST00000284767 STXBP1P61764 594 aaKnown RBP17.05■□□□□ 0.32
PDLIM3-201ENST00000284767 UBE2IP63279 158 aaKnown RBP17.05■□□□□ 0.32
PDLIM3-201ENST00000284767 CEP78Q5JTW2 689 aa17.05■□□□□ 0.32
PDLIM3-201ENST00000284767 Q7L0L9 218 aa17.05■□□□□ 0.32
PDLIM3-201ENST00000284767 DOK4Q8TEW6 326 aa17.05■□□□□ 0.32
PDLIM3-201ENST00000284767 RSC1A1Q92681 617 aa17.05■□□□□ 0.32
PDLIM3-201ENST00000284767 UPRTQ96BW1 309 aa17.05■□□□□ 0.32
PDLIM3-201ENST00000284767 GSDMCQ9BYG8 508 aa17.05■□□□□ 0.32
PDLIM3-201ENST00000284767 OR51I1Q9H343 314 aa17.05■□□□□ 0.32
PDLIM3-201ENST00000284767 STARD5Q9NSY2 213 aa17.05■□□□□ 0.32
PDLIM3-201ENST00000284767 P2RX2Q9UBL9 471 aa17.05■□□□□ 0.32
PDLIM3-201ENST00000284767 TRPC4Q9UBN4 977 aa17.05■□□□□ 0.32
PDLIM3-201ENST00000284767 ADAM30Q9UKF2 790 aa17.05■□□□□ 0.32
PDLIM3-201ENST00000284767 CLCA3PQ9Y6N3 262 aa17.05■□□□□ 0.32
PDLIM3-201ENST00000284767 CAV3P56539 151 aa17.05■□□□□ 0.32
PDLIM3-201ENST00000284767 P2RY14Q15391 338 aa17.05■□□□□ 0.32
PDLIM3-201ENST00000284767 LTB4RQ15722 352 aa17.05■□□□□ 0.32
PDLIM3-201ENST00000284767 TYW3Q6IPR3 259 aaKnown RBP17.05■□□□□ 0.32
PDLIM3-201ENST00000284767 MRGPREQ86SM8 312 aa17.05■□□□□ 0.32
PDLIM3-201ENST00000284767 GLCCI1Q86VQ1 547 aa17.05■□□□□ 0.32
PDLIM3-201ENST00000284767 IQCHQ86VS3 1027 aa17.05■□□□□ 0.32
PDLIM3-201ENST00000284767 OR4N5Q8IXE1 308 aa17.05■□□□□ 0.32
PDLIM3-201ENST00000284767 MORN4Q8NDC4 146 aa17.05■□□□□ 0.32
PDLIM3-201ENST00000284767 KLHDC7BQ96G42 594 aa17.05■□□□□ 0.32
PDLIM3-201ENST00000284767 MAN2C1Q9NTJ4 1040 aa17.05■□□□□ 0.32
PDLIM3-201ENST00000284767 COLQQ9Y215 455 aaPredicted RBP17.05■□□□□ 0.32
PDLIM3-201ENST00000284767 SLC9A8Q9Y2E8 581 aa17.05■□□□□ 0.32
PDLIM3-201ENST00000284767 CTSBP07858 339 aa17.04■□□□□ 0.32
PDLIM3-201ENST00000284767 ARSBP15848 533 aa17.04■□□□□ 0.32
PDLIM3-201ENST00000284767 NTSP30990 170 aa17.04■□□□□ 0.32
PDLIM3-201ENST00000284767 NUDT1P36639 197 aa17.04■□□□□ 0.32
PDLIM3-201ENST00000284767 MADCAM1Q13477 382 aa17.04■□□□□ 0.32
PDLIM3-201ENST00000284767 PTCRAQ6ISU1 281 aaPredicted RBP17.04■□□□□ 0.32
PDLIM3-201ENST00000284767 SLC48A1Q6P1K1 146 aa17.04■□□□□ 0.32
PDLIM3-201ENST00000284767 RFPL4BQ6ZWI9 263 aa17.04■□□□□ 0.32
PDLIM3-201ENST00000284767 OR9A2Q8NGT5 310 aa17.04■□□□□ 0.32
PDLIM3-201ENST00000284767 C16orf58Q96GQ5 468 aa17.04■□□□□ 0.32
PDLIM3-201ENST00000284767 CITED4Q96RK1 184 aa17.04■□□□□ 0.32
PDLIM3-201ENST00000284767 LRRC61Q9BV99 259 aa17.04■□□□□ 0.32
PDLIM3-201ENST00000284767 FAM170BA6NMN3 283 aa17.04■□□□□ 0.32
PDLIM3-201ENST00000284767 LIMS3P0CW19 117 aa17.04■□□□□ 0.32
PDLIM3-201ENST00000284767 LIMS4P0CW20 117 aa17.04■□□□□ 0.32
PDLIM3-201ENST00000284767 INPP1P49441 399 aa17.04■□□□□ 0.32
PDLIM3-201ENST00000284767 LASP1Q14847 261 aaKnown RBP17.04■□□□□ 0.32
PDLIM3-201ENST00000284767 ZNF485Q8NCK3 441 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms