RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 SAP130Q9H0E3 1048 aa10.79□□□□□ -0.68
USP53-201ENST00000274030 PLEK2Q9NYT0 353 aa10.79□□□□□ -0.68
USP53-201ENST00000274030 GPR45Q9Y5Y3 372 aa10.79□□□□□ -0.68
USP53-201ENST00000274030 MYH15Q9Y2K3 1946 aa10.78□□□□□ -0.68
USP53-201ENST00000274030 FAM230AA0A1W2PPH8 454 aa10.78□□□□□ -0.68
USP53-201ENST00000274030 PRSS38A1L453 326 aa10.78□□□□□ -0.68
USP53-201ENST00000274030 C1orf105O95561 183 aa10.78□□□□□ -0.68
USP53-201ENST00000274030 OR8U9P0C7N5 309 aa10.78□□□□□ -0.68
USP53-201ENST00000274030 PRSS3P35030 304 aa10.78□□□□□ -0.68
USP53-201ENST00000274030 P2RY14Q15391 338 aa10.78□□□□□ -0.68
USP53-201ENST00000274030 C9orf135Q5VTT2 229 aa10.78□□□□□ -0.68
USP53-201ENST00000274030 CGB2Q6NT52 195 aa10.78□□□□□ -0.68
USP53-201ENST00000274030 ANKRD60Q9BZ19 345 aa10.78□□□□□ -0.68
USP53-201ENST00000274030 CNOT11Q9UKZ1 510 aaKnown RBP10.78□□□□□ -0.68
USP53-201ENST00000274030 LSM5Q9Y4Y9 91 aaKnown RBP10.78□□□□□ -0.68
USP53-201ENST00000274030 LOC285095A0A1B0GVY8 99 aa10.78□□□□□ -0.68
USP53-201ENST00000274030 ZNF14P17017 642 aaPredicted RBP10.78□□□□□ -0.68
USP53-201ENST00000274030 ERP29P30040 261 aaKnown RBP10.78□□□□□ -0.68
USP53-201ENST00000274030 NOVP48745 357 aa10.78□□□□□ -0.68
USP53-201ENST00000274030 EEF1A1P68104 462 aaKnown RBP10.78□□□□□ -0.68
USP53-201ENST00000274030 TUBB3Q13509 450 aa10.78□□□□□ -0.68
USP53-201ENST00000274030 BAIAP2L2Q6UXY1 529 aa10.78□□□□□ -0.68
USP53-201ENST00000274030 ADAMTS16Q8TE57 1224 aa10.78□□□□□ -0.68
USP53-201ENST00000274030 NUDT22Q9BRQ3 303 aa10.78□□□□□ -0.68
USP53-201ENST00000274030 CPNE7Q9UBL6 633 aa10.78□□□□□ -0.68
USP53-201ENST00000274030 USP22Q9UPT9 525 aa10.78□□□□□ -0.68
USP53-201ENST00000274030 ENTPD2Q9Y5L3 495 aa10.78□□□□□ -0.68
USP53-201ENST00000274030 MYH13Q9UKX3 1938 aa10.78□□□□□ -0.68
USP53-201ENST00000274030 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.78□□□□□ -0.68
USP53-201ENST00000274030 H3BMQ9 156 aa10.78□□□□□ -0.68
USP53-201ENST00000274030 ADAMTS4O75173 837 aa10.78□□□□□ -0.68
USP53-201ENST00000274030 ACTL6BO94805 426 aa10.78□□□□□ -0.68
USP53-201ENST00000274030 NUDT7P0C024 238 aa10.78□□□□□ -0.68
USP53-201ENST00000274030 FOLR3P41439 243 aa10.78□□□□□ -0.68
USP53-201ENST00000274030 SLC16A9Q7RTY1 509 aa10.78□□□□□ -0.68
USP53-201ENST00000274030 COG8Q96MW5 612 aa10.78□□□□□ -0.68
USP53-201ENST00000274030 CDC6Q99741 560 aa10.78□□□□□ -0.68
USP53-201ENST00000274030 R3HDMLQ9H3Y0 253 aa10.78□□□□□ -0.68
USP53-201ENST00000274030 GDE1Q9NZC3 331 aa10.78□□□□□ -0.68
USP53-201ENST00000274030 COQ3Q9NZJ6 369 aa10.78□□□□□ -0.68
USP53-201ENST00000274030 SCML1Q9UN30 329 aa10.78□□□□□ -0.68
USP53-201ENST00000274030 SERPINA5P05154 406 aa10.78□□□□□ -0.68
USP53-201ENST00000274030 HTR2BP41595 481 aa10.78□□□□□ -0.68
USP53-201ENST00000274030 MAT1AQ00266 395 aaKnown RBP10.78□□□□□ -0.68
USP53-201ENST00000274030 MGAT3Q09327 533 aa10.78□□□□□ -0.68
USP53-201ENST00000274030 LSAMPQ13449 338 aa10.78□□□□□ -0.68
USP53-201ENST00000274030 SELPLGQ14242 412 aa10.78□□□□□ -0.68
USP53-201ENST00000274030 KLHDC9Q8NEP7 349 aa10.78□□□□□ -0.68
USP53-201ENST00000274030 OR2T35Q8NGX2 323 aa10.78□□□□□ -0.68
USP53-201ENST00000274030 LYRM1O43325 122 aa10.77□□□□□ -0.68
USP53-201ENST00000274030 CD53P19397 219 aa10.77□□□□□ -0.68
USP53-201ENST00000274030 C21orf33P30042 268 aaPredicted RBP10.77□□□□□ -0.68
USP53-201ENST00000274030 CAV2P51636 162 aa10.77□□□□□ -0.68
USP53-201ENST00000274030 FGFBP1Q14512 234 aa10.77□□□□□ -0.68
USP53-201ENST00000274030 KIR2DS3Q14952 304 aa10.77□□□□□ -0.68
USP53-201ENST00000274030 PLAG1Q6DJT9 500 aa10.77□□□□□ -0.68
USP53-201ENST00000274030 Q6ZPB1 254 aaPredicted RBP10.77□□□□□ -0.68
USP53-201ENST00000274030 INTS6Q9UL03 887 aaKnown RBP10.77□□□□□ -0.68
USP53-201ENST00000274030 RP1L1Q8IWN7 2480 aaPredicted RBP10.77□□□□□ -0.68
USP53-201ENST00000274030 ANKRD28O15084 1053 aa10.77□□□□□ -0.68
USP53-201ENST00000274030 HTR2AP28223 471 aa10.77□□□□□ -0.68
USP53-201ENST00000274030 CTHP32929 405 aa10.77□□□□□ -0.68
USP53-201ENST00000274030 ACTBP60709 375 aa10.77□□□□□ -0.68
USP53-201ENST00000274030 ACTG1P63261 375 aa10.77□□□□□ -0.68
USP53-201ENST00000274030 HBA1P69905 142 aa10.77□□□□□ -0.68
USP53-201ENST00000274030 VEZF1Q14119 521 aa10.77□□□□□ -0.68
USP53-201ENST00000274030 SLC5A12Q1EHB4 618 aa10.77□□□□□ -0.68
USP53-201ENST00000274030 LEXMQ3ZCV2 418 aa10.77□□□□□ -0.68
USP53-201ENST00000274030 LCN10Q6JVE6 187 aa10.77□□□□□ -0.68
USP53-201ENST00000274030 ANKRD54Q6NXT1 300 aa10.77□□□□□ -0.68
USP53-201ENST00000274030 PODNL1Q6PEZ8 512 aa10.77□□□□□ -0.68
USP53-201ENST00000274030 CCDC28AQ8IWP9 274 aa10.77□□□□□ -0.68
USP53-201ENST00000274030 METTL25Q8N6Q8 603 aa10.77□□□□□ -0.68
USP53-201ENST00000274030 SFXN5Q8TD22 340 aa10.77□□□□□ -0.68
USP53-201ENST00000274030 SPTSSAQ969W0 71 aa10.77□□□□□ -0.68
USP53-201ENST00000274030 S100PBPQ96BU1 408 aa10.77□□□□□ -0.68
USP53-201ENST00000274030 BIRC8Q96P09 236 aa10.77□□□□□ -0.68
USP53-201ENST00000274030 ATOH8Q96SQ7 321 aa10.77□□□□□ -0.68
USP53-201ENST00000274030 NTMT1Q9BV86 223 aa10.77□□□□□ -0.68
USP53-201ENST00000274030 FBRSQ9HAH7 460 aa10.77□□□□□ -0.68
USP53-201ENST00000274030 LRIT1Q9P2V4 623 aa10.77□□□□□ -0.68
USP53-201ENST00000274030 PRELID1Q9Y255 219 aa10.77□□□□□ -0.68
USP53-201ENST00000274030 PCDHGA8Q9Y5G5 932 aa10.77□□□□□ -0.68
USP53-201ENST00000274030 ARPC5O15511 151 aa10.77□□□□□ -0.69
USP53-201ENST00000274030 SLC16A7O60669 478 aa10.77□□□□□ -0.69
USP53-201ENST00000274030 HBQ1P09105 142 aa10.77□□□□□ -0.69
USP53-201ENST00000274030 DBHP09172 617 aa10.77□□□□□ -0.69
USP53-201ENST00000274030 HIST1H1TP22492 207 aaPredicted RBP10.77□□□□□ -0.69
USP53-201ENST00000274030 AOAHP28039 575 aa10.77□□□□□ -0.69
USP53-201ENST00000274030 ADH6P28332 368 aa10.77□□□□□ -0.69
USP53-201ENST00000274030 PTPN6P29350 595 aa10.77□□□□□ -0.69
USP53-201ENST00000274030 GK3PQ14409 553 aa10.77□□□□□ -0.69
USP53-201ENST00000274030 MBTPS1Q14703 1052 aa10.77□□□□□ -0.69
USP53-201ENST00000274030 UNQ6126/PRO20091Q6UXV3 157 aa10.77□□□□□ -0.69
USP53-201ENST00000274030 PAQR9Q6ZVX9 377 aa10.77□□□□□ -0.69
USP53-201ENST00000274030 MRPL21Q7Z2W9 205 aaKnown RBP10.77□□□□□ -0.69
USP53-201ENST00000274030 KIF18BQ86Y91 864 aa10.77□□□□□ -0.69
USP53-201ENST00000274030 TANKQ92844 425 aa10.77□□□□□ -0.69
USP53-201ENST00000274030 MS4A4AQ96JQ5 239 aa10.77□□□□□ -0.69
USP53-201ENST00000274030 QRSL1Q9H0R6 528 aaKnown RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms