RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 CD63P08962 238 aa7.54□□□□□ -1.2
LIMD1-201ENST00000273317 ADARB1P78563 741 aaKnown RBP7.54□□□□□ -1.2
LIMD1-201ENST00000273317 TBCEQ15813 527 aaPredicted RBP7.54□□□□□ -1.2
LIMD1-201ENST00000273317 PLXDC1Q8IUK5 500 aa7.54□□□□□ -1.2
LIMD1-201ENST00000273317 HORMAD2Q8N7B1 307 aa7.54□□□□□ -1.2
LIMD1-201ENST00000273317 BORCS6Q96GS4 357 aa7.54□□□□□ -1.2
LIMD1-201ENST00000273317 SORCS2Q96PQ0 1159 aa7.54□□□□□ -1.2
LIMD1-201ENST00000273317 DMRT3Q9NQL9 472 aa7.54□□□□□ -1.2
LIMD1-201ENST00000273317 SPHK2Q9NRA0 654 aa7.54□□□□□ -1.2
LIMD1-201ENST00000273317 ZDHHC7Q9NXF8 308 aa7.54□□□□□ -1.2
LIMD1-201ENST00000273317 BRWD1Q9NSI6 2320 aa7.54□□□□□ -1.2
LIMD1-201ENST00000273317 ECM29Q5VYK3 1845 aa7.54□□□□□ -1.2
LIMD1-201ENST00000273317 ACTL6BO94805 426 aa7.54□□□□□ -1.2
LIMD1-201ENST00000273317 SPDEFO95238 335 aa7.54□□□□□ -1.2
LIMD1-201ENST00000273317 KCNK5O95279 499 aa7.54□□□□□ -1.2
LIMD1-201ENST00000273317 HLA-EP13747 358 aa7.54□□□□□ -1.2
LIMD1-201ENST00000273317 CPT2P23786 658 aa7.54□□□□□ -1.2
LIMD1-201ENST00000273317 CNR2P34972 360 aa7.54□□□□□ -1.2
LIMD1-201ENST00000273317 GPR176Q14439 515 aa7.54□□□□□ -1.2
LIMD1-201ENST00000273317 RGNQ15493 299 aa7.54□□□□□ -1.2
LIMD1-201ENST00000273317 GPR19Q15760 415 aa7.54□□□□□ -1.2
LIMD1-201ENST00000273317 CIDECQ96AQ7 238 aaPredicted RBP7.54□□□□□ -1.2
LIMD1-201ENST00000273317 SLC12A9Q9BXP2 914 aa7.54□□□□□ -1.2
LIMD1-201ENST00000273317 KIAA0355O15063 1070 aa7.54□□□□□ -1.2
LIMD1-201ENST00000273317 RNGTTO60942 597 aaKnown RBP7.54□□□□□ -1.2
LIMD1-201ENST00000273317 SLC11A1P49279 550 aa7.54□□□□□ -1.2
LIMD1-201ENST00000273317 PIGFQ07326 219 aa7.54□□□□□ -1.2
LIMD1-201ENST00000273317 ZNF648Q5T619 568 aaPredicted RBP7.54□□□□□ -1.2
LIMD1-201ENST00000273317 PDZD3Q86UT5 571 aa7.54□□□□□ -1.2
LIMD1-201ENST00000273317 LMF2Q9BU23 707 aaKnown RBP7.54□□□□□ -1.2
LIMD1-201ENST00000273317 GORASP2Q9H8Y8 452 aa7.54□□□□□ -1.2
LIMD1-201ENST00000273317 RDH14Q9HBH5 336 aa7.54□□□□□ -1.2
LIMD1-201ENST00000273317 FBRSL1Q9HCM7 1045 aaKnown RBP7.54□□□□□ -1.2
LIMD1-201ENST00000273317 CD300AQ9UGN4 299 aa7.54□□□□□ -1.2
LIMD1-201ENST00000273317 TRAV18A0A075B6X5 111 aa7.54□□□□□ -1.2
LIMD1-201ENST00000273317 CD300LBA8K4G0 201 aa7.54□□□□□ -1.2
LIMD1-201ENST00000273317 GAPDHSO14556 408 aaPredicted RBP7.54□□□□□ -1.2
LIMD1-201ENST00000273317 LDB2O43679 373 aa7.54□□□□□ -1.2
LIMD1-201ENST00000273317 FGF4P08620 206 aa7.54□□□□□ -1.2
LIMD1-201ENST00000273317 CBLP22681 906 aa7.54□□□□□ -1.2
LIMD1-201ENST00000273317 GGT5P36269 586 aa7.54□□□□□ -1.2
LIMD1-201ENST00000273317 AFF3P51826 1226 aaKnown RBP7.54□□□□□ -1.2
LIMD1-201ENST00000273317 EIF2B1Q14232 305 aaKnown RBP7.54□□□□□ -1.2
LIMD1-201ENST00000273317 HAS2Q92819 552 aa7.54□□□□□ -1.2
LIMD1-201ENST00000273317 NMNAT1Q9HAN9 279 aaPredicted RBP7.54□□□□□ -1.2
LIMD1-201ENST00000273317 MED17Q9NVC6 651 aa7.54□□□□□ -1.2
LIMD1-201ENST00000273317 INTS1Q8N201 2190 aaKnown RBP7.53□□□□□ -1.2
LIMD1-201ENST00000273317 A0A1W2PPK0 400 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 NME4O00746 187 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 ARPC1BO15143 372 aaKnown RBP7.53□□□□□ -1.2
LIMD1-201ENST00000273317 JMJD7P0C870 316 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 CHRNB1P11230 501 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 ARSBP15848 533 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 C5AR1P21730 350 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 NR4A2P43354 598 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 BDH1Q02338 343 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 FGFBP1Q14512 234 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 DESI1Q6ICB0 168 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 TSSK4Q6SA08 328 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 ADAMTS14Q8WXS8 1223 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 PAPOLGQ9BWT3 736 aaKnown RBP7.53□□□□□ -1.2
LIMD1-201ENST00000273317 TCRBV21S2A2A0A5A6 115 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 G3V2L1 256 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 LCMT2O60294 686 aaKnown RBP7.53□□□□□ -1.2
LIMD1-201ENST00000273317 EVI2BP34910 448 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 LRP8Q14114 963 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 WDR88Q6ZMY6 472 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 IQCF1Q8N6M8 205 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 TMEM185AQ8NFB2 350 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 OR6C4Q8NGE1 309 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 OR4K13Q8NH42 304 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 MIB2Q96AX9 1013 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 IGSF21Q96ID5 467 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 TCEAL2Q9H3H9 227 aaPredicted RBP7.53□□□□□ -1.2
LIMD1-201ENST00000273317 SCML1Q9UN30 329 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 SPTBN1Q01082 2364 aaKnown RBP7.53□□□□□ -1.2
LIMD1-201ENST00000273317 LOC102723532A0A0G2JNH3 316 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 KRBA1A5PL33 1030 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 NFKBIEO00221 500 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 ZNF254O75437 659 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 NUDT7P0C024 238 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 LAMP1P11279 417 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 NDUFAF5Q5TEU4 345 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 SULF2Q8IWU5 870 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 DTWD1Q8N5C7 304 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 FUBP1Q96AE4 644 aaKnown RBP7.53□□□□□ -1.2
LIMD1-201ENST00000273317 ZNF597Q96LX8 424 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 DNAJC15Q9Y5T4 150 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 KRBOX1C9JBD0 128 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 LILRB3O75022 631 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 CDC123O75794 336 aaPredicted RBP7.53□□□□□ -1.2
LIMD1-201ENST00000273317 CD79BP40259 229 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 SOX3P41225 446 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 SPINT3P49223 89 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 GATMP50440 423 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 SELENOWP63302 87 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 DCST2Q5T1A1 773 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 SLC2A12Q8TD20 617 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 PTERQ96BW5 349 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 MCOLN1Q9GZU1 580 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms