RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 ZNF527Q8NB42 609 aa12.99□□□□□ -0.33
SS18-201ENST00000269137 OR9Q2Q8NGE9 314 aa12.99□□□□□ -0.33
SS18-201ENST00000269137 ADAMTS16Q8TE57 1224 aa12.99□□□□□ -0.33
SS18-201ENST00000269137 C8orf44Q96CB5 159 aa12.99□□□□□ -0.33
SS18-201ENST00000269137 GABARAPL3Q9BY60 117 aa12.99□□□□□ -0.33
SS18-201ENST00000269137 GRIP2Q9C0E4 1043 aa12.99□□□□□ -0.33
SS18-201ENST00000269137 NRSN2Q9GZP1 204 aa12.99□□□□□ -0.33
SS18-201ENST00000269137 PAPOLBQ9NRJ5 636 aaKnown RBP12.99□□□□□ -0.33
SS18-201ENST00000269137 DNAJB12Q9NXW2 375 aaKnown RBP12.99□□□□□ -0.33
SS18-201ENST00000269137 POFUT2Q9Y2G5 429 aa12.99□□□□□ -0.33
SS18-201ENST00000269137 PCDHGB5Q9Y5G0 923 aa12.99□□□□□ -0.33
SS18-201ENST00000269137 GVINP1Q7Z2Y8 2422 aa12.99□□□□□ -0.33
SS18-201ENST00000269137 LOC100130705A0A1B0GUX0 176 aa12.99□□□□□ -0.33
SS18-201ENST00000269137 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.99□□□□□ -0.33
SS18-201ENST00000269137 A0A1W2PQ72 361 aa12.99□□□□□ -0.33
SS18-201ENST00000269137 CPSF4LA6NMK7 179 aaKnown RBP12.99□□□□□ -0.33
SS18-201ENST00000269137 E9PQ18 207 aa12.99□□□□□ -0.33
SS18-201ENST00000269137 UGT2B11O75310 529 aa12.99□□□□□ -0.33
SS18-201ENST00000269137 BCAS1O75363 584 aaPredicted RBP12.99□□□□□ -0.33
SS18-201ENST00000269137 REM1O75628 298 aa12.99□□□□□ -0.33
SS18-201ENST00000269137 UTS2O95399 124 aa12.99□□□□□ -0.33
SS18-201ENST00000269137 ADAP00813 363 aa12.99□□□□□ -0.33
SS18-201ENST00000269137 NGFRP08138 427 aa12.99□□□□□ -0.33
SS18-201ENST00000269137 UBTFL6P0CB48 400 aaPredicted RBP12.99□□□□□ -0.33
SS18-201ENST00000269137 PRG2P13727 222 aa12.99□□□□□ -0.33
SS18-201ENST00000269137 TBXA2RP21731 343 aa12.99□□□□□ -0.33
SS18-201ENST00000269137 RPS6KA3P51812 740 aa12.99□□□□□ -0.33
SS18-201ENST00000269137 PNLIPRP2P54317 469 aa12.99□□□□□ -0.33
SS18-201ENST00000269137 IL18R1Q13478 541 aa12.99□□□□□ -0.33
SS18-201ENST00000269137 PCOLCEQ15113 449 aa12.99□□□□□ -0.33
SS18-201ENST00000269137 KRT80Q6KB66 452 aa12.99□□□□□ -0.33
SS18-201ENST00000269137 PARP8Q8N3A8 854 aa12.99□□□□□ -0.33
SS18-201ENST00000269137 ZNF614Q8N883 585 aa12.99□□□□□ -0.33
SS18-201ENST00000269137 AQP11Q8NBQ7 271 aa12.99□□□□□ -0.33
SS18-201ENST00000269137 OR5L2Q8NGL0 311 aa12.99□□□□□ -0.33
SS18-201ENST00000269137 SLC38A4Q969I6 547 aa12.99□□□□□ -0.33
SS18-201ENST00000269137 ZNF559Q9BR84 538 aa12.99□□□□□ -0.33
SS18-201ENST00000269137 ZNF700Q9H0M5 742 aa12.99□□□□□ -0.33
SS18-201ENST00000269137 ZNF556Q9HAH1 456 aa12.99□□□□□ -0.33
SS18-201ENST00000269137 PNPLA3Q9NST1 481 aa12.99□□□□□ -0.33
SS18-201ENST00000269137 MGAT4BQ9UQ53 548 aa12.99□□□□□ -0.33
SS18-201ENST00000269137 SLC35A3Q9Y2D2 325 aa12.99□□□□□ -0.33
SS18-201ENST00000269137 FAM186AA6NE01 2351 aa12.98□□□□□ -0.33
SS18-201ENST00000269137 SDK2Q58EX2 2172 aa12.98□□□□□ -0.33
SS18-201ENST00000269137 CDC14CA4D256 554 aa12.98□□□□□ -0.33
SS18-201ENST00000269137 ABCB7O75027 752 aa12.98□□□□□ -0.33
SS18-201ENST00000269137 GASTP01350 101 aa12.98□□□□□ -0.33
SS18-201ENST00000269137 LINGO3P0C6S8 592 aa12.98□□□□□ -0.33
SS18-201ENST00000269137 FTH1P19P0C7X4 201 aa12.98□□□□□ -0.33
SS18-201ENST00000269137 GKN3PP0CG01 181 aa12.98□□□□□ -0.33
SS18-201ENST00000269137 CSRP1P21291 193 aaKnown RBP12.98□□□□□ -0.33
SS18-201ENST00000269137 MMP11P24347 488 aa12.98□□□□□ -0.33
SS18-201ENST00000269137 ABCD3P28288 659 aa12.98□□□□□ -0.33
SS18-201ENST00000269137 KRT20P35900 424 aa12.98□□□□□ -0.33
SS18-201ENST00000269137 POLR2IP36954 125 aaKnown RBP12.98□□□□□ -0.33
SS18-201ENST00000269137 FOLR3P41439 243 aa12.98□□□□□ -0.33
SS18-201ENST00000269137 PLCXD2Q0VAA5 305 aa12.98□□□□□ -0.33
SS18-201ENST00000269137 FNDC7Q5VTL7 733 aa12.98□□□□□ -0.33
SS18-201ENST00000269137 ZNF550Q7Z398 422 aa12.98□□□□□ -0.33
SS18-201ENST00000269137 GDF7Q7Z4P5 450 aa12.98□□□□□ -0.33
SS18-201ENST00000269137 OMA1Q96E52 524 aa12.98□□□□□ -0.33
SS18-201ENST00000269137 SLC41A3Q96GZ6 507 aa12.98□□□□□ -0.33
SS18-201ENST00000269137 ADOQ96SZ5 270 aa12.98□□□□□ -0.33
SS18-201ENST00000269137 NIPSNAP1Q9BPW8 284 aa12.98□□□□□ -0.33
SS18-201ENST00000269137 DGCR6LQ9BY27 220 aa12.98□□□□□ -0.33
SS18-201ENST00000269137 FAM117AQ9C073 453 aa12.98□□□□□ -0.33
SS18-201ENST00000269137 CTPS2Q9NRF8 586 aa12.98□□□□□ -0.33
SS18-201ENST00000269137 ENOPH1Q9UHY7 261 aa12.98□□□□□ -0.33
SS18-201ENST00000269137 NTNG1Q9Y2I2 539 aa12.98□□□□□ -0.33
SS18-201ENST00000269137 HS3ST3B1Q9Y662 390 aa12.98□□□□□ -0.33
SS18-201ENST00000269137 IGHV1-45A0A0A0MS14 117 aa12.97□□□□□ -0.33
SS18-201ENST00000269137 TRBV11-1A0A0K0K1C0 115 aa12.97□□□□□ -0.33
SS18-201ENST00000269137 TRAPPC13A5PLN9 417 aa12.97□□□□□ -0.33
SS18-201ENST00000269137 SCDO00767 359 aa12.97□□□□□ -0.33
SS18-201ENST00000269137 OR10H3O60404 316 aa12.97□□□□□ -0.33
SS18-201ENST00000269137 ZFAND5O76080 213 aa12.97□□□□□ -0.33
SS18-201ENST00000269137 CLIC3O95833 236 aa12.97□□□□□ -0.33
SS18-201ENST00000269137 CSTAP01040 98 aa12.97□□□□□ -0.33
SS18-201ENST00000269137 THY1P04216 161 aa12.97□□□□□ -0.33
SS18-201ENST00000269137 HTR2AP28223 471 aa12.97□□□□□ -0.33
SS18-201ENST00000269137 IL12BP29460 328 aa12.97□□□□□ -0.33
SS18-201ENST00000269137 ACAA2P42765 397 aaKnown RBP12.97□□□□□ -0.33
SS18-201ENST00000269137 NRG3P56975 720 aa12.97□□□□□ -0.33
SS18-201ENST00000269137 MYBPC1Q00872 1141 aa12.97□□□□□ -0.33
SS18-201ENST00000269137 NPRL3Q12980 569 aa12.97□□□□□ -0.33
SS18-201ENST00000269137 KEAP1Q14145 624 aa12.97□□□□□ -0.33
SS18-201ENST00000269137 OR1Q1Q15612 314 aa12.97□□□□□ -0.33
SS18-201ENST00000269137 C3orf38Q5JPI3 329 aa12.97□□□□□ -0.33
SS18-201ENST00000269137 FAM69BQ5VUD6 431 aa12.97□□□□□ -0.33
SS18-201ENST00000269137 PGBD2Q6P3X8 592 aa12.97□□□□□ -0.33
SS18-201ENST00000269137 ZNF613Q6PF04 617 aa12.97□□□□□ -0.33
SS18-201ENST00000269137 ZNF440Q8IYI8 595 aa12.97□□□□□ -0.33
SS18-201ENST00000269137 ESX1Q8N693 406 aa12.97□□□□□ -0.33
SS18-201ENST00000269137 FAM71CQ8NEG0 241 aa12.97□□□□□ -0.33
SS18-201ENST00000269137 OR4K5Q8NGD3 323 aa12.97□□□□□ -0.33
SS18-201ENST00000269137 CT55Q8WUE5 264 aa12.97□□□□□ -0.33
SS18-201ENST00000269137 IMMP1LQ96LU5 166 aa12.97□□□□□ -0.33
SS18-201ENST00000269137 MUS81Q96NY9 551 aa12.97□□□□□ -0.33
SS18-201ENST00000269137 TRIM2Q9C040 744 aa12.97□□□□□ -0.33
SS18-201ENST00000269137 RIBC2Q9H4K1 309 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms