RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 OSMP13725 252 aa14.19□□□□□ -0.14
COPS3-201ENST00000268717 DRD5P21918 477 aa14.19□□□□□ -0.14
COPS3-201ENST00000268717 FUT4P22083 530 aa14.19□□□□□ -0.14
COPS3-201ENST00000268717 CRHBPP24387 322 aa14.19□□□□□ -0.14
COPS3-201ENST00000268717 ATP12AP54707 1039 aa14.19□□□□□ -0.14
COPS3-201ENST00000268717 IL5RAQ01344 420 aa14.19□□□□□ -0.14
COPS3-201ENST00000268717 ALDH6A1Q02252 535 aaKnown RBP14.19□□□□□ -0.14
COPS3-201ENST00000268717 CTU2Q2VPK5 515 aaKnown RBP14.19□□□□□ -0.14
COPS3-201ENST00000268717 ENTPD8Q5MY95 495 aa14.19□□□□□ -0.14
COPS3-201ENST00000268717 C1orf94Q6P1W5 598 aa14.19□□□□□ -0.14
COPS3-201ENST00000268717 KLHL17Q6TDP4 642 aa14.19□□□□□ -0.14
COPS3-201ENST00000268717 PLEKHM3Q6ZWE6 761 aa14.19□□□□□ -0.14
COPS3-201ENST00000268717 OVCH1Q7RTY7 1134 aa14.19□□□□□ -0.14
COPS3-201ENST00000268717 DEPDC4Q8N2C3 294 aa14.19□□□□□ -0.14
COPS3-201ENST00000268717 OR4K5Q8NGD3 323 aa14.19□□□□□ -0.14
COPS3-201ENST00000268717 STT3BQ8TCJ2 826 aa14.19□□□□□ -0.14
COPS3-201ENST00000268717 ZNF721Q8TF20 911 aa14.19□□□□□ -0.14
COPS3-201ENST00000268717 HOXD1Q9GZZ0 328 aa14.19□□□□□ -0.14
COPS3-201ENST00000268717 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.19□□□□□ -0.14
COPS3-201ENST00000268717 CTSFQ9UBX1 484 aa14.19□□□□□ -0.14
COPS3-201ENST00000268717 MKL2Q9ULH7 1088 aa14.19□□□□□ -0.14
COPS3-201ENST00000268717 PCDHGA6Q9Y5G7 932 aa14.19□□□□□ -0.14
COPS3-201ENST00000268717 CENPVL1A0A0U1RR11 272 aa14.18□□□□□ -0.14
COPS3-201ENST00000268717 VSTM2BA6NLU5 285 aa14.18□□□□□ -0.14
COPS3-201ENST00000268717 CPNE3O75131 537 aaKnown RBP14.18□□□□□ -0.14
COPS3-201ENST00000268717 IGKV1D-16P01601 117 aa14.18□□□□□ -0.14
COPS3-201ENST00000268717 ZGLP1P0C6A0 271 aa14.18□□□□□ -0.14
COPS3-201ENST00000268717 ATXN8OSP0DMR3 200 aa14.18□□□□□ -0.14
COPS3-201ENST00000268717 ATP6V1B1P15313 513 aa14.18□□□□□ -0.14
COPS3-201ENST00000268717 GSTM3P21266 225 aa14.18□□□□□ -0.14
COPS3-201ENST00000268717 EPHA2P29317 976 aa14.18□□□□□ -0.14
COPS3-201ENST00000268717 CCKBRP32239 447 aa14.18□□□□□ -0.14
COPS3-201ENST00000268717 EFNA3P52797 238 aa14.18□□□□□ -0.14
COPS3-201ENST00000268717 CSNK2BP67870 215 aa14.18□□□□□ -0.14
COPS3-201ENST00000268717 CDK5R2Q13319 367 aa14.18□□□□□ -0.14
COPS3-201ENST00000268717 MAD2L1BPQ15013 274 aaPredicted RBP14.18□□□□□ -0.14
COPS3-201ENST00000268717 DECR1Q16698 335 aa14.18□□□□□ -0.14
COPS3-201ENST00000268717 MEP1AQ16819 746 aa14.18□□□□□ -0.14
COPS3-201ENST00000268717 ISLR2Q6UXK2 745 aa14.18□□□□□ -0.14
COPS3-201ENST00000268717 BCORP1Q8N888 145 aa14.18□□□□□ -0.14
COPS3-201ENST00000268717 BMPERQ8N8U9 685 aa14.18□□□□□ -0.14
COPS3-201ENST00000268717 ZSCAN1Q8NBB4 408 aa14.18□□□□□ -0.14
COPS3-201ENST00000268717 SLC38A9Q8NBW4 561 aa14.18□□□□□ -0.14
COPS3-201ENST00000268717 C17orf47Q8NEP4 570 aa14.18□□□□□ -0.14
COPS3-201ENST00000268717 CLIP3Q96DZ5 547 aa14.18□□□□□ -0.14
COPS3-201ENST00000268717 LRFN5Q96NI6 719 aa14.18□□□□□ -0.14
COPS3-201ENST00000268717 FBXO8Q9NRD0 319 aa14.18□□□□□ -0.14
COPS3-201ENST00000268717 MRTO4Q9UKD2 239 aaKnown RBP14.18□□□□□ -0.14
COPS3-201ENST00000268717 OR10H1Q9Y4A9 318 aa14.18□□□□□ -0.14
COPS3-201ENST00000268717 ZAR1LA6NP61 321 aa14.17□□□□□ -0.14
COPS3-201ENST00000268717 AGRPO00253 132 aa14.17□□□□□ -0.14
COPS3-201ENST00000268717 TO15178 435 aa14.17□□□□□ -0.14
COPS3-201ENST00000268717 FRS3O43559 492 aa14.17□□□□□ -0.14
COPS3-201ENST00000268717 MRPS14O60783 128 aaKnown RBP14.17□□□□□ -0.14
COPS3-201ENST00000268717 TIAF1O95411 115 aa14.17□□□□□ -0.14
COPS3-201ENST00000268717 ELK4P28324 431 aa14.17□□□□□ -0.14
COPS3-201ENST00000268717 ALDH3B2P48448 385 aa14.17□□□□□ -0.14
COPS3-201ENST00000268717 CRISP1P54107 249 aa14.17□□□□□ -0.14
COPS3-201ENST00000268717 MC2RQ01718 297 aa14.17□□□□□ -0.14
COPS3-201ENST00000268717 FGFBP1Q14512 234 aa14.17□□□□□ -0.14
COPS3-201ENST00000268717 LAIR2Q6ISS4 152 aa14.17□□□□□ -0.14
COPS3-201ENST00000268717 ZNF773Q6PK81 442 aa14.17□□□□□ -0.14
COPS3-201ENST00000268717 ZAR1Q86SH2 424 aa14.17□□□□□ -0.14
COPS3-201ENST00000268717 CCDC71Q8IV32 467 aaPredicted RBP14.17□□□□□ -0.14
COPS3-201ENST00000268717 OR4N2Q8NGD1 307 aa14.17□□□□□ -0.14
COPS3-201ENST00000268717 OR1N1Q8NGS0 311 aa14.17□□□□□ -0.14
COPS3-201ENST00000268717 ACOT11Q8WXI4 607 aaPredicted RBP14.17□□□□□ -0.14
COPS3-201ENST00000268717 GTPBP3Q969Y2 492 aaKnown RBP14.17□□□□□ -0.14
COPS3-201ENST00000268717 SLC41A3Q96GZ6 507 aa14.17□□□□□ -0.14
COPS3-201ENST00000268717 LCORQ96JN0 433 aaPredicted RBP14.17□□□□□ -0.14
COPS3-201ENST00000268717 COPS7AQ9UBW8 275 aa14.17□□□□□ -0.14
COPS3-201ENST00000268717 REV1Q9UBZ9 1251 aa14.17□□□□□ -0.14
COPS3-201ENST00000268717 A0A087WUU8 490 aa14.16□□□□□ -0.14
COPS3-201ENST00000268717 TRAPPC13A5PLN9 417 aa14.16□□□□□ -0.14
COPS3-201ENST00000268717 CLDN24A6NM45 220 aa14.16□□□□□ -0.14
COPS3-201ENST00000268717 CPSF4LA6NMK7 179 aaKnown RBP14.16□□□□□ -0.14
COPS3-201ENST00000268717 EFCAB7A8K855 629 aa14.16□□□□□ -0.14
COPS3-201ENST00000268717 B4E171 279 aa14.16□□□□□ -0.14
COPS3-201ENST00000268717 SLC1A7O00341 560 aa14.16□□□□□ -0.14
COPS3-201ENST00000268717 MPZL2O60487 215 aa14.16□□□□□ -0.14
COPS3-201ENST00000268717 IL33O95760 270 aa14.16□□□□□ -0.14
COPS3-201ENST00000268717 ANGPTL1O95841 491 aa14.16□□□□□ -0.14
COPS3-201ENST00000268717 ADH7P40394 386 aa14.16□□□□□ -0.14
COPS3-201ENST00000268717 TSPAN7P41732 249 aa14.16□□□□□ -0.14
COPS3-201ENST00000268717 EBPQ15125 230 aaKnown RBP14.16□□□□□ -0.14
COPS3-201ENST00000268717 PDZK1Q5T2W1 519 aa14.16□□□□□ -0.14
COPS3-201ENST00000268717 ZNF613Q6PF04 617 aa14.16□□□□□ -0.14
COPS3-201ENST00000268717 BORAQ6PGQ7 559 aa14.16□□□□□ -0.14
COPS3-201ENST00000268717 B3GNT8Q7Z7M8 397 aa14.16□□□□□ -0.14
COPS3-201ENST00000268717 ADIPOR1Q96A54 375 aa14.16□□□□□ -0.14
COPS3-201ENST00000268717 RNF31Q96EP0 1072 aa14.16□□□□□ -0.14
COPS3-201ENST00000268717 ZNF559Q9BR84 538 aa14.16□□□□□ -0.14
COPS3-201ENST00000268717 OR8D2Q9GZM6 311 aa14.16□□□□□ -0.14
COPS3-201ENST00000268717 KRCC1Q9NPI7 259 aaPredicted RBP14.16□□□□□ -0.14
COPS3-201ENST00000268717 OCIAD1Q9NX40 245 aa14.16□□□□□ -0.14
COPS3-201ENST00000268717 NXT1Q9UKK6 140 aaKnown RBP14.16□□□□□ -0.14
COPS3-201ENST00000268717 PPIEQ9UNP9 301 aaKnown RBP14.16□□□□□ -0.14
COPS3-201ENST00000268717 CFAP47Q6ZTR5 3102 aa14.16□□□□□ -0.14
COPS3-201ENST00000268717 A0A1W2PNU3 283 aaPredicted RBP14.15□□□□□ -0.14
COPS3-201ENST00000268717 LINGO3P0C6S8 592 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms