RNA–Protein interactions for RNA: ENST00000267202.6

VPS37B-201, Transcript of VPS37B, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS37B, Length 3,028 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-201ENST00000267202 SHC1P29353 583 aa17.05■□□□□ 0.32
VPS37B-201ENST00000267202 IFNGR2P38484 337 aa17.05■□□□□ 0.32
VPS37B-201ENST00000267202 HCCSP53701 268 aa17.05■□□□□ 0.32
VPS37B-201ENST00000267202 DUSP5Q16690 384 aa17.05■□□□□ 0.32
VPS37B-201ENST00000267202 CXXC5Q7LFL8 322 aaKnown RBP17.05■□□□□ 0.32
VPS37B-201ENST00000267202 OR51A7Q8NH64 312 aa17.05■□□□□ 0.32
VPS37B-201ENST00000267202 GRPEL2Q8TAA5 225 aa17.05■□□□□ 0.32
VPS37B-201ENST00000267202 GRHL3Q8TE85 626 aa17.05■□□□□ 0.32
VPS37B-201ENST00000267202 AP3S1Q92572 193 aa17.05■□□□□ 0.32
VPS37B-201ENST00000267202 KXD1Q9BQD3 176 aa17.05■□□□□ 0.32
VPS37B-201ENST00000267202 TBC1D3DA0A087WVF3 549 aa17.05■□□□□ 0.32
VPS37B-201ENST00000267202 TBC1D3IA0A087WXS9 549 aa17.05■□□□□ 0.32
VPS37B-201ENST00000267202 TBC1D3EA0A087X179 549 aa17.05■□□□□ 0.32
VPS37B-201ENST00000267202 TBC1D3KA0A087X1G2 549 aa17.05■□□□□ 0.32
VPS37B-201ENST00000267202 LINC01553A4QN01 128 aa17.05■□□□□ 0.32
VPS37B-201ENST00000267202 TBC1D3FA6NER0 549 aaPredicted RBP17.05■□□□□ 0.32
VPS37B-201ENST00000267202 TBC1D3LB9A6J9 549 aa17.05■□□□□ 0.32
VPS37B-201ENST00000267202 ARHGEF9O43307 516 aa17.05■□□□□ 0.32
VPS37B-201ENST00000267202 LANCL1O43813 399 aa17.05■□□□□ 0.32
VPS37B-201ENST00000267202 TBC1D3HP0C7X1 549 aa17.05■□□□□ 0.32
VPS37B-201ENST00000267202 ELK1P19419 428 aa17.05■□□□□ 0.32
VPS37B-201ENST00000267202 ACVR1BP36896 505 aa17.05■□□□□ 0.32
VPS37B-201ENST00000267202 ZIC1Q15915 447 aa17.05■□□□□ 0.32
VPS37B-201ENST00000267202 AADACL4Q5VUY2 407 aa17.05■□□□□ 0.32
VPS37B-201ENST00000267202 TBC1D3GQ6DHY5 549 aa17.05■□□□□ 0.32
VPS37B-201ENST00000267202 TBC1D3CQ6IPX1 549 aa17.05■□□□□ 0.32
VPS37B-201ENST00000267202 WDR88Q6ZMY6 472 aa17.05■□□□□ 0.32
VPS37B-201ENST00000267202 ZNF836Q6ZNA1 936 aa17.05■□□□□ 0.32
VPS37B-201ENST00000267202 BPHLQ86WA6 291 aaPredicted RBP17.05■□□□□ 0.32
VPS37B-201ENST00000267202 TBC1D3Q8IZP1 549 aaPredicted RBP17.05■□□□□ 0.32
VPS37B-201ENST00000267202 OR8H1Q8NGG4 311 aa17.05■□□□□ 0.32
VPS37B-201ENST00000267202 LCN9Q8WX39 176 aa17.05■□□□□ 0.32
VPS37B-201ENST00000267202 SMARCD2Q92925 531 aa17.05■□□□□ 0.32
VPS37B-201ENST00000267202 UPRTQ96BW1 309 aa17.05■□□□□ 0.32
VPS37B-201ENST00000267202 HDAC8Q9BY41 377 aa17.05■□□□□ 0.32
VPS37B-201ENST00000267202 PLA2G2FQ9BZM2 168 aa17.05■□□□□ 0.32
VPS37B-201ENST00000267202 MCOLN1Q9GZU1 580 aa17.05■□□□□ 0.32
VPS37B-201ENST00000267202 CCDC86Q9H6F5 360 aaKnown RBP17.05■□□□□ 0.32
VPS37B-201ENST00000267202 FGF22Q9HCT0 170 aa17.05■□□□□ 0.32
VPS37B-201ENST00000267202 LRRC72A6NJI9 287 aa17.05■□□□□ 0.32
VPS37B-201ENST00000267202 KDM4EB2RXH2 506 aaPredicted RBP17.05■□□□□ 0.32
VPS37B-201ENST00000267202 CASC3O15234 703 aaKnown RBP17.05■□□□□ 0.32
VPS37B-201ENST00000267202 HNRNPA1P09651 372 aaKnown RBP eCLIP17.05■□□□□ 0.32
VPS37B-201ENST00000267202 CPN2P22792 545 aa17.05■□□□□ 0.32
VPS37B-201ENST00000267202 ANXA11P50995 505 aaKnown RBP17.05■□□□□ 0.32
VPS37B-201ENST00000267202 MLC1Q15049 377 aa17.05■□□□□ 0.32
VPS37B-201ENST00000267202 RPE65Q16518 533 aa17.05■□□□□ 0.32
VPS37B-201ENST00000267202 VASNQ6EMK4 673 aa17.05■□□□□ 0.32
VPS37B-201ENST00000267202 FRRS1Q6ZNA5 592 aa17.05■□□□□ 0.32
VPS37B-201ENST00000267202 TMEM91Q6ZNR0 172 aa17.05■□□□□ 0.32
VPS37B-201ENST00000267202 PRSS41Q7RTY9 318 aa17.05■□□□□ 0.32
VPS37B-201ENST00000267202 RDH10Q8IZV5 341 aa17.05■□□□□ 0.32
VPS37B-201ENST00000267202 OR51L1Q8NGJ5 315 aa17.05■□□□□ 0.32
VPS37B-201ENST00000267202 OR13C5Q8NGS8 318 aa17.05■□□□□ 0.32
VPS37B-201ENST00000267202 TEX101Q9BY14 249 aa17.05■□□□□ 0.32
VPS37B-201ENST00000267202 MKRN2Q9H000 416 aaKnown RBP17.05■□□□□ 0.32
VPS37B-201ENST00000267202 CD93Q9NPY3 652 aa17.05■□□□□ 0.32
VPS37B-201ENST00000267202 MCUBQ9NWR8 336 aa17.05■□□□□ 0.32
VPS37B-201ENST00000267202 USP36Q9P275 1121 aaKnown RBP17.05■□□□□ 0.32
VPS37B-201ENST00000267202 EXTL2Q9UBQ6 330 aa17.05■□□□□ 0.32
VPS37B-201ENST00000267202 LAMA1P25391 3075 aa17.04■□□□□ 0.32
VPS37B-201ENST00000267202 STK25O00506 426 aa17.04■□□□□ 0.32
VPS37B-201ENST00000267202 PAICSP22234 425 aaKnown RBP17.04■□□□□ 0.32
VPS37B-201ENST00000267202 OR2L8Q8NGY9 312 aa17.04■□□□□ 0.32
VPS37B-201ENST00000267202 ACOT11Q8WXI4 607 aaPredicted RBP17.04■□□□□ 0.32
VPS37B-201ENST00000267202 UBQLN3Q9H347 655 aa17.04■□□□□ 0.32
VPS37B-201ENST00000267202 TBC1D29Q9UFV1 150 aa17.04■□□□□ 0.32
VPS37B-201ENST00000267202 SLC23A1Q9UHI7 598 aa17.04■□□□□ 0.32
VPS37B-201ENST00000267202 ZNF443Q9Y2A4 671 aaPredicted RBP17.04■□□□□ 0.32
VPS37B-201ENST00000267202 TRAV27A0A087WT01 109 aa17.04■□□□□ 0.32
VPS37B-201ENST00000267202 A0A0B4J203 849 aa17.04■□□□□ 0.32
VPS37B-201ENST00000267202 CARNS1A5YM72 827 aa17.04■□□□□ 0.32
VPS37B-201ENST00000267202 LYRM1O43325 122 aa17.04■□□□□ 0.32
VPS37B-201ENST00000267202 NOS1APO75052 506 aaPredicted RBP17.04■□□□□ 0.32
VPS37B-201ENST00000267202 TMEM35AQ53FP2 167 aa17.04■□□□□ 0.32
VPS37B-201ENST00000267202 MRM1Q6IN84 353 aaKnown RBP17.04■□□□□ 0.32
VPS37B-201ENST00000267202 ZNF620Q6ZNG0 422 aa17.04■□□□□ 0.32
VPS37B-201ENST00000267202 FAM109AQ8N4B1 249 aa17.04■□□□□ 0.32
VPS37B-201ENST00000267202 DNAJC5GQ8N7S2 189 aa17.04■□□□□ 0.32
VPS37B-201ENST00000267202 TSACCQ96A04 125 aaPredicted RBP17.04■□□□□ 0.32
VPS37B-201ENST00000267202 ZNF681Q96N22 645 aa17.04■□□□□ 0.32
VPS37B-201ENST00000267202 ARHGDIGQ99819 225 aa17.04■□□□□ 0.32
VPS37B-201ENST00000267202 ACTRT3Q9BYD9 372 aa17.04■□□□□ 0.32
VPS37B-201ENST00000267202 MRPS7Q9Y2R9 242 aaKnown RBP17.04■□□□□ 0.32
VPS37B-201ENST00000267202 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.03■□□□□ 0.32
VPS37B-201ENST00000267202 POM121BA6NF01 834 aa17.03■□□□□ 0.32
VPS37B-201ENST00000267202 AKAP8O43823 692 aaKnown RBP17.03■□□□□ 0.32
VPS37B-201ENST00000267202 ZGLP1P0C6A0 271 aa17.03■□□□□ 0.32
VPS37B-201ENST00000267202 MAKP20794 623 aa17.03■□□□□ 0.32
VPS37B-201ENST00000267202 PPP3R1P63098 170 aa17.03■□□□□ 0.32
VPS37B-201ENST00000267202 POU6F2P78424 691 aaPredicted RBP17.03■□□□□ 0.32
VPS37B-201ENST00000267202 DSG2Q14126 1118 aa17.03■□□□□ 0.32
VPS37B-201ENST00000267202 GNA13Q14344 377 aa17.03■□□□□ 0.32
VPS37B-201ENST00000267202 EXOSC7Q15024 291 aaKnown RBP17.03■□□□□ 0.32
VPS37B-201ENST00000267202 CDC73Q6P1J9 531 aa17.03■□□□□ 0.32
VPS37B-201ENST00000267202 SFTPA2Q8IWL1 248 aa17.03■□□□□ 0.32
VPS37B-201ENST00000267202 FRMD1Q8N878 549 aa17.03■□□□□ 0.32
VPS37B-201ENST00000267202 OR2T33Q8NG76 320 aa17.03■□□□□ 0.32
VPS37B-201ENST00000267202 OSTF1Q92882 214 aa17.03■□□□□ 0.32
VPS37B-201ENST00000267202 GIMAP5Q96F15 307 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms