RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 UQCRC1P31930 480 aa8.5□□□□□ -1.05
MSH4-201ENST00000263187 IFNGR2P38484 337 aa8.5□□□□□ -1.05
MSH4-201ENST00000263187 CCR6P51684 374 aa8.5□□□□□ -1.05
MSH4-201ENST00000263187 OR12D2P58182 307 aa8.5□□□□□ -1.05
MSH4-201ENST00000263187 GPR176Q14439 515 aa8.5□□□□□ -1.05
MSH4-201ENST00000263187 EXOSC7Q15024 291 aaKnown RBP8.5□□□□□ -1.05
MSH4-201ENST00000263187 FCN2Q15485 313 aa8.5□□□□□ -1.05
MSH4-201ENST00000263187 DUSP5Q16690 384 aa8.5□□□□□ -1.05
MSH4-201ENST00000263187 NDUFA9Q16795 377 aa8.5□□□□□ -1.05
MSH4-201ENST00000263187 EOGTQ5NDL2 527 aa8.5□□□□□ -1.05
MSH4-201ENST00000263187 C1orf53Q5VUE5 145 aa8.5□□□□□ -1.05
MSH4-201ENST00000263187 PRSS41Q7RTY9 318 aa8.5□□□□□ -1.05
MSH4-201ENST00000263187 SFTPA2Q8IWL1 248 aa8.5□□□□□ -1.05
MSH4-201ENST00000263187 SIX5Q8N196 739 aa8.5□□□□□ -1.05
MSH4-201ENST00000263187 ARIH2OSQ8N7S6 290 aa8.5□□□□□ -1.05
MSH4-201ENST00000263187 OR8H1Q8NGG4 311 aa8.5□□□□□ -1.05
MSH4-201ENST00000263187 OR5H6Q8NGV6 325 aa8.5□□□□□ -1.05
MSH4-201ENST00000263187 COX14Q96I36 57 aa8.5□□□□□ -1.05
MSH4-201ENST00000263187 RIPOR3Q96MK2 946 aa8.5□□□□□ -1.05
MSH4-201ENST00000263187 OR52D1Q9H346 318 aa8.5□□□□□ -1.05
MSH4-201ENST00000263187 FGF20Q9NP95 211 aaPredicted RBP8.5□□□□□ -1.05
MSH4-201ENST00000263187 SLC23A1Q9UHI7 598 aa8.5□□□□□ -1.05
MSH4-201ENST00000263187 TRDV1A0A1B0GX56 115 aa8.5□□□□□ -1.05
MSH4-201ENST00000263187 OR2W5A6NFC9 320 aa8.5□□□□□ -1.05
MSH4-201ENST00000263187 LRRN3E7EW58 273 aa8.5□□□□□ -1.05
MSH4-201ENST00000263187 STK25O00506 426 aa8.5□□□□□ -1.05
MSH4-201ENST00000263187 IMPA2O14732 288 aa8.5□□□□□ -1.05
MSH4-201ENST00000263187 FABP7O15540 132 aa8.5□□□□□ -1.05
MSH4-201ENST00000263187 ARHGEF9O43307 516 aa8.5□□□□□ -1.05
MSH4-201ENST00000263187 RNF13O43567 381 aa8.5□□□□□ -1.05
MSH4-201ENST00000263187 ZNF780AO75290 641 aaPredicted RBP8.5□□□□□ -1.05
MSH4-201ENST00000263187 CLEC3AO75596 197 aa8.5□□□□□ -1.05
MSH4-201ENST00000263187 DRD2P14416 443 aa8.5□□□□□ -1.05
MSH4-201ENST00000263187 NDUFV2P19404 249 aa8.5□□□□□ -1.05
MSH4-201ENST00000263187 DRD5P21918 477 aa8.5□□□□□ -1.05
MSH4-201ENST00000263187 TEAD1P28347 426 aa8.5□□□□□ -1.05
MSH4-201ENST00000263187 GRPRP30550 384 aa8.5□□□□□ -1.05
MSH4-201ENST00000263187 IFNA8P32881 189 aa8.5□□□□□ -1.05
MSH4-201ENST00000263187 NNATQ16517 81 aa8.5□□□□□ -1.05
MSH4-201ENST00000263187 ZSWIM7Q19AV6 140 aa8.5□□□□□ -1.05
MSH4-201ENST00000263187 SLC48A1Q6P1K1 146 aa8.5□□□□□ -1.05
MSH4-201ENST00000263187 ZNF620Q6ZNG0 422 aa8.5□□□□□ -1.05
MSH4-201ENST00000263187 RASSF6Q6ZTQ3 369 aa8.5□□□□□ -1.05
MSH4-201ENST00000263187 ETFBKMTQ8IXQ9 262 aa8.5□□□□□ -1.05
MSH4-201ENST00000263187 TMIEQ8NEW7 156 aa8.5□□□□□ -1.05
MSH4-201ENST00000263187 OR2L3Q8NG85 312 aa8.5□□□□□ -1.05
MSH4-201ENST00000263187 OR4D9Q8NGE8 314 aa8.5□□□□□ -1.05
MSH4-201ENST00000263187 SPPL3Q8TCT6 385 aa8.5□□□□□ -1.05
MSH4-201ENST00000263187 RFKQ969G6 155 aa8.5□□□□□ -1.05
MSH4-201ENST00000263187 MS4A3Q96HJ5 214 aa8.5□□□□□ -1.05
MSH4-201ENST00000263187 THAP7Q9BT49 309 aaPredicted RBP8.5□□□□□ -1.05
MSH4-201ENST00000263187 GPR174Q9BXC1 333 aa8.5□□□□□ -1.05
MSH4-201ENST00000263187 LRRN3Q9H3W5 708 aa8.5□□□□□ -1.05
MSH4-201ENST00000263187 SLC28A3Q9HAS3 691 aa8.5□□□□□ -1.05
MSH4-201ENST00000263187 MARK1Q9P0L2 795 aa8.5□□□□□ -1.05
MSH4-201ENST00000263187 A0A0A6YYJ9 748 aa8.49□□□□□ -1.05
MSH4-201ENST00000263187 FAM171A2A8MVW0 826 aa8.49□□□□□ -1.05
MSH4-201ENST00000263187 GRXCR1A8MXD5 290 aa8.49□□□□□ -1.05
MSH4-201ENST00000263187 KDM4EB2RXH2 506 aaPredicted RBP8.49□□□□□ -1.05
MSH4-201ENST00000263187 C1QTNF3-AMACRE9PGA6 284 aa8.49□□□□□ -1.05
MSH4-201ENST00000263187 SCO1O75880 301 aa8.49□□□□□ -1.05
MSH4-201ENST00000263187 PVRP15151 417 aa8.49□□□□□ -1.05
MSH4-201ENST00000263187 PYCR1P32322 319 aa8.49□□□□□ -1.05
MSH4-201ENST00000263187 NAA10P41227 235 aaPredicted RBP8.49□□□□□ -1.05
MSH4-201ENST00000263187 FZD5Q13467 585 aa8.49□□□□□ -1.05
MSH4-201ENST00000263187 CEP78Q5JTW2 689 aa8.49□□□□□ -1.05
MSH4-201ENST00000263187 BHLHB9Q6PI77 547 aa8.49□□□□□ -1.05
MSH4-201ENST00000263187 ZNF836Q6ZNA1 936 aa8.49□□□□□ -1.05
MSH4-201ENST00000263187 ZNF761Q86XN6 746 aaPredicted RBP8.49□□□□□ -1.05
MSH4-201ENST00000263187 RAB42Q8N4Z0 105 aa8.49□□□□□ -1.05
MSH4-201ENST00000263187 OR5T3Q8NGG3 340 aa8.49□□□□□ -1.05
MSH4-201ENST00000263187 FANK1Q8TC84 345 aa8.49□□□□□ -1.05
MSH4-201ENST00000263187 ACOT11Q8WXI4 607 aaPredicted RBP8.49□□□□□ -1.05
MSH4-201ENST00000263187 OSTF1Q92882 214 aa8.49□□□□□ -1.05
MSH4-201ENST00000263187 PTCHD1Q96NR3 888 aa8.49□□□□□ -1.05
MSH4-201ENST00000263187 ABHD1Q96SE0 405 aa8.49□□□□□ -1.05
MSH4-201ENST00000263187 FN3KQ9H479 309 aa8.49□□□□□ -1.05
MSH4-201ENST00000263187 IGFLR1Q9H665 355 aa8.49□□□□□ -1.05
MSH4-201ENST00000263187 ACOXLQ9NUZ1 547 aa8.49□□□□□ -1.05
MSH4-201ENST00000263187 ING3Q9NXR8 418 aa8.49□□□□□ -1.05
MSH4-201ENST00000263187 ANKRD61A6NGH8 418 aa8.49□□□□□ -1.05
MSH4-201ENST00000263187 PROM1O43490 865 aa8.49□□□□□ -1.05
MSH4-201ENST00000263187 SNRPBP14678 240 aaKnown RBP8.49□□□□□ -1.05
MSH4-201ENST00000263187 POU3F3P20264 500 aaPredicted RBP8.49□□□□□ -1.05
MSH4-201ENST00000263187 MLLT3P42568 568 aaPredicted RBP8.49□□□□□ -1.05
MSH4-201ENST00000263187 SGCGQ13326 291 aa8.49□□□□□ -1.05
MSH4-201ENST00000263187 TP53I3Q53FA7 332 aa8.49□□□□□ -1.05
MSH4-201ENST00000263187 FRRS1Q6ZNA5 592 aa8.49□□□□□ -1.05
MSH4-201ENST00000263187 AMIGO1Q86WK6 493 aa8.49□□□□□ -1.05
MSH4-201ENST00000263187 ACBD7Q8N6N7 88 aa8.49□□□□□ -1.05
MSH4-201ENST00000263187 FAM181AQ8N9Y4 354 aa8.49□□□□□ -1.05
MSH4-201ENST00000263187 ZNF485Q8NCK3 441 aa8.49□□□□□ -1.05
MSH4-201ENST00000263187 OR2L5Q8NG80 312 aa8.49□□□□□ -1.05
MSH4-201ENST00000263187 OR56A1Q8NGH5 318 aa8.49□□□□□ -1.05
MSH4-201ENST00000263187 LCN9Q8WX39 176 aa8.49□□□□□ -1.05
MSH4-201ENST00000263187 ZNF707Q96C28 371 aaPredicted RBP8.49□□□□□ -1.05
MSH4-201ENST00000263187 C4orf36Q96KX1 117 aa8.49□□□□□ -1.05
MSH4-201ENST00000263187 GDF15Q99988 308 aa8.49□□□□□ -1.05
MSH4-201ENST00000263187 ZNF649Q9BS31 505 aa8.49□□□□□ -1.05
MSH4-201ENST00000263187 BTBD1Q9H0C5 482 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms