RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 ZNF607Q96SK3 696 aa15.17■□□□□ 0.02
CHCHD3-201ENST00000262570 TTTY12Q9BZ98 90 aa15.17■□□□□ 0.02
CHCHD3-201ENST00000262570 PACSIN3Q9UKS6 424 aa15.17■□□□□ 0.02
CHCHD3-201ENST00000262570 HRH3Q9Y5N1 445 aa15.17■□□□□ 0.02
CHCHD3-201ENST00000262570 GPC6Q9Y625 555 aaPredicted RBP15.17■□□□□ 0.02
CHCHD3-201ENST00000262570 IGLV3-32A0A0A0MS00 114 aa15.16■□□□□ 0.02
CHCHD3-201ENST00000262570 CLDN24A6NM45 220 aa15.16■□□□□ 0.02
CHCHD3-201ENST00000262570 H3BNH8 94 aa15.16■□□□□ 0.02
CHCHD3-201ENST00000262570 EBAG9O00559 213 aa15.16■□□□□ 0.02
CHCHD3-201ENST00000262570 GNB5O14775 395 aa15.16■□□□□ 0.02
CHCHD3-201ENST00000262570 HSD17B1P14061 328 aa15.16■□□□□ 0.02
CHCHD3-201ENST00000262570 NID1P14543 1247 aa15.16■□□□□ 0.02
CHCHD3-201ENST00000262570 ENDOUP21128 410 aaKnown RBP15.16■□□□□ 0.02
CHCHD3-201ENST00000262570 AQP1P29972 269 aa15.16■□□□□ 0.02
CHCHD3-201ENST00000262570 RFC3P40938 356 aa15.16■□□□□ 0.02
CHCHD3-201ENST00000262570 RNF144AP50876 292 aaPredicted RBP15.16■□□□□ 0.02
CHCHD3-201ENST00000262570 KCNJ10P78508 379 aa15.16■□□□□ 0.02
CHCHD3-201ENST00000262570 SPATS1Q496A3 300 aa15.16■□□□□ 0.02
CHCHD3-201ENST00000262570 RNFT1Q5M7Z0 435 aa15.16■□□□□ 0.02
CHCHD3-201ENST00000262570 BNC2Q6ZN30 1099 aaPredicted RBP15.16■□□□□ 0.02
CHCHD3-201ENST00000262570 CCDC80Q76M96 950 aa15.16■□□□□ 0.02
CHCHD3-201ENST00000262570 KRT73Q86Y46 540 aa15.16■□□□□ 0.02
CHCHD3-201ENST00000262570 PLCZ1Q86YW0 608 aa15.16■□□□□ 0.02
CHCHD3-201ENST00000262570 RNF148Q8N7C7 305 aa15.16■□□□□ 0.02
CHCHD3-201ENST00000262570 GNRHR2Q96P88 292 aa15.16■□□□□ 0.02
CHCHD3-201ENST00000262570 KCTD14Q9BQ13 255 aaPredicted RBP15.16■□□□□ 0.02
CHCHD3-201ENST00000262570 HHATLQ9HCP6 504 aa15.16■□□□□ 0.02
CHCHD3-201ENST00000262570 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.16■□□□□ 0.02
CHCHD3-201ENST00000262570 PPP4R1LQ9P1A2 415 aa15.16■□□□□ 0.02
CHCHD3-201ENST00000262570 IFT52Q9Y366 437 aa15.16■□□□□ 0.02
CHCHD3-201ENST00000262570 M0QX08 132 aa15.15■□□□□ 0.02
CHCHD3-201ENST00000262570 THBS1P07996 1170 aa15.15■□□□□ 0.02
CHCHD3-201ENST00000262570 RFPL3SP0C7P2 107 aa15.15■□□□□ 0.02
CHCHD3-201ENST00000262570 PABPC4LP0CB38 370 aaKnown RBP15.15■□□□□ 0.02
CHCHD3-201ENST00000262570 GABPB1Q06547 395 aaPredicted RBP15.15■□□□□ 0.02
CHCHD3-201ENST00000262570 CEACAM7Q14002 265 aa15.15■□□□□ 0.02
CHCHD3-201ENST00000262570 EIF3MQ7L2H7 374 aaKnown RBP15.15■□□□□ 0.02
CHCHD3-201ENST00000262570 PATL1Q86TB9 770 aaKnown RBP15.15■□□□□ 0.02
CHCHD3-201ENST00000262570 VRK2Q86Y07 508 aa15.15■□□□□ 0.02
CHCHD3-201ENST00000262570 CMIPQ8IY22 773 aa15.15■□□□□ 0.02
CHCHD3-201ENST00000262570 ARHGAP24Q8N264 748 aa15.15■□□□□ 0.02
CHCHD3-201ENST00000262570 CISD2Q8N5K1 135 aaKnown RBP15.15■□□□□ 0.02
CHCHD3-201ENST00000262570 WDR60Q8WVS4 1066 aa15.15■□□□□ 0.02
CHCHD3-201ENST00000262570 BTBD10Q9BSF8 475 aa15.15■□□□□ 0.02
CHCHD3-201ENST00000262570 SPATA5L1Q9BVQ7 753 aa15.15■□□□□ 0.02
CHCHD3-201ENST00000262570 RSPO3Q9BXY4 272 aaPredicted RBP15.15■□□□□ 0.02
CHCHD3-201ENST00000262570 UBQLN3Q9H347 655 aa15.15■□□□□ 0.02
CHCHD3-201ENST00000262570 ZNF232Q9UNY5 417 aa15.15■□□□□ 0.02
CHCHD3-201ENST00000262570 SLC35A3Q9Y2D2 325 aa15.15■□□□□ 0.02
CHCHD3-201ENST00000262570 TTLL8A6PVC2 850 aa15.15■□□□□ 0.02
CHCHD3-201ENST00000262570 GYG2O15488 501 aa15.15■□□□□ 0.02
CHCHD3-201ENST00000262570 ZNF264O43296 627 aa15.15■□□□□ 0.02
CHCHD3-201ENST00000262570 SERPINB7O75635 380 aa15.15■□□□□ 0.02
CHCHD3-201ENST00000262570 CBR3O75828 277 aa15.15■□□□□ 0.02
CHCHD3-201ENST00000262570 PDE9AO76083 593 aa15.15■□□□□ 0.02
CHCHD3-201ENST00000262570 MFN2O95140 757 aa15.15■□□□□ 0.02
CHCHD3-201ENST00000262570 CSTAP01040 98 aa15.15■□□□□ 0.02
CHCHD3-201ENST00000262570 CRYABP02511 175 aaKnown RBP15.15■□□□□ 0.02
CHCHD3-201ENST00000262570 ZNF24P17028 368 aa15.15■□□□□ 0.02
CHCHD3-201ENST00000262570 HTR1EP28566 365 aa15.15■□□□□ 0.02
CHCHD3-201ENST00000262570 PGM1P36871 562 aa15.15■□□□□ 0.02
CHCHD3-201ENST00000262570 RASSF2P50749 326 aa15.15■□□□□ 0.02
CHCHD3-201ENST00000262570 CRYBA2P53672 197 aa15.15■□□□□ 0.02
CHCHD3-201ENST00000262570 PPIAP62937 165 aaKnown RBP15.15■□□□□ 0.02
CHCHD3-201ENST00000262570 PLGLB1Q02325 96 aa15.15■□□□□ 0.02
CHCHD3-201ENST00000262570 PLAURQ03405 335 aa15.15■□□□□ 0.02
CHCHD3-201ENST00000262570 LARS2Q15031 903 aaKnown RBP15.15■□□□□ 0.02
CHCHD3-201ENST00000262570 FXNQ16595 210 aa15.15■□□□□ 0.02
CHCHD3-201ENST00000262570 DNAL1Q4LDG9 190 aa15.15■□□□□ 0.02
CHCHD3-201ENST00000262570 LIN52Q52LA3 116 aa15.15■□□□□ 0.02
CHCHD3-201ENST00000262570 SOWAHCQ53LP3 525 aaPredicted RBP15.15■□□□□ 0.02
CHCHD3-201ENST00000262570 ZNF311Q5JNZ3 666 aa15.15■□□□□ 0.02
CHCHD3-201ENST00000262570 CBLN3Q6UW01 205 aa15.15■□□□□ 0.02
CHCHD3-201ENST00000262570 SLC22A16Q86VW1 577 aa15.15■□□□□ 0.02
CHCHD3-201ENST00000262570 TMEM251Q8N6I4 163 aa15.15■□□□□ 0.02
CHCHD3-201ENST00000262570 FADS6Q8N9I5 356 aa15.15■□□□□ 0.02
CHCHD3-201ENST00000262570 FAM156AQ8NDB6 213 aa15.15■□□□□ 0.02
CHCHD3-201ENST00000262570 FAM71CQ8NEG0 241 aa15.15■□□□□ 0.02
CHCHD3-201ENST00000262570 TNIP2Q8NFZ5 429 aa15.15■□□□□ 0.02
CHCHD3-201ENST00000262570 SNRNP40Q96DI7 357 aaKnown RBP15.15■□□□□ 0.02
CHCHD3-201ENST00000262570 ZNF703Q9H7S9 590 aaPredicted RBP15.15■□□□□ 0.02
CHCHD3-201ENST00000262570 MED11Q9P086 117 aa15.15■□□□□ 0.02
CHCHD3-201ENST00000262570 FBXL2Q9UKC9 423 aa15.15■□□□□ 0.02
CHCHD3-201ENST00000262570 PRPF19Q9UMS4 504 aaKnown RBP15.15■□□□□ 0.02
CHCHD3-201ENST00000262570 ZNF443Q9Y2A4 671 aaPredicted RBP15.15■□□□□ 0.02
CHCHD3-201ENST00000262570 CARD8Q9Y2G2 431 aa15.15■□□□□ 0.02
CHCHD3-201ENST00000262570 NTNG1Q9Y2I2 539 aa15.15■□□□□ 0.02
CHCHD3-201ENST00000262570 C15orf41Q9Y2V0 281 aa15.15■□□□□ 0.02
CHCHD3-201ENST00000262570 CHST2Q9Y4C5 530 aa15.15■□□□□ 0.02
CHCHD3-201ENST00000262570 FAM208BQ5VWN6 2430 aa15.14■□□□□ 0.01
CHCHD3-201ENST00000262570 COL6A6A6NMZ7 2263 aa15.14■□□□□ 0.01
CHCHD3-201ENST00000262570 GTPBP1O00178 669 aaKnown RBP15.14■□□□□ 0.01
CHCHD3-201ENST00000262570 HCRTR2O43614 444 aa15.14■□□□□ 0.01
CHCHD3-201ENST00000262570 EIF4E2O60573 245 aaKnown RBP15.14■□□□□ 0.01
CHCHD3-201ENST00000262570 BCAS1O75363 584 aaPredicted RBP15.14■□□□□ 0.01
CHCHD3-201ENST00000262570 UBL4AP11441 157 aa15.14■□□□□ 0.01
CHCHD3-201ENST00000262570 MSX1P28360 303 aa15.14■□□□□ 0.01
CHCHD3-201ENST00000262570 PRKAR1BP31321 381 aa15.14■□□□□ 0.01
CHCHD3-201ENST00000262570 KDELR2P33947 212 aa15.14■□□□□ 0.01
CHCHD3-201ENST00000262570 EEF1A1P68104 462 aaKnown RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms