RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 CSF1P09603 554 aa9.2□□□□□ -0.94
CTDSPL2-201ENST00000260327 SNRPBP14678 240 aaKnown RBP9.2□□□□□ -0.94
CTDSPL2-201ENST00000260327 FXYD4P59646 89 aa9.2□□□□□ -0.94
CTDSPL2-201ENST00000260327 IL13RA1P78552 427 aa9.2□□□□□ -0.94
CTDSPL2-201ENST00000260327 HOXC5Q00444 222 aa9.2□□□□□ -0.94
CTDSPL2-201ENST00000260327 HTR4Q13639 388 aa9.2□□□□□ -0.94
CTDSPL2-201ENST00000260327 PDSS1Q5T2R2 415 aa9.2□□□□□ -0.94
CTDSPL2-201ENST00000260327 ARHGAP11AQ6P4F7 1023 aa9.2□□□□□ -0.94
CTDSPL2-201ENST00000260327 CEP68Q76N32 757 aa9.2□□□□□ -0.94
CTDSPL2-201ENST00000260327 GDPD3Q7L5L3 318 aa9.2□□□□□ -0.94
CTDSPL2-201ENST00000260327 ZNF550Q7Z398 422 aa9.2□□□□□ -0.94
CTDSPL2-201ENST00000260327 SLC46A3Q7Z3Q1 461 aa9.2□□□□□ -0.94
CTDSPL2-201ENST00000260327 ANKLE1Q8NAG6 615 aa9.2□□□□□ -0.94
CTDSPL2-201ENST00000260327 TOMM40LQ969M1 308 aa9.2□□□□□ -0.94
CTDSPL2-201ENST00000260327 SLC22A18Q96BI1 424 aa9.2□□□□□ -0.94
CTDSPL2-201ENST00000260327 C16orf58Q96GQ5 468 aa9.2□□□□□ -0.94
CTDSPL2-201ENST00000260327 MAP6Q96JE9 813 aa9.2□□□□□ -0.94
CTDSPL2-201ENST00000260327 CNOT2Q9NZN8 540 aaKnown RBP9.2□□□□□ -0.94
CTDSPL2-201ENST00000260327 UBE2J1Q9Y385 318 aaPredicted RBP9.2□□□□□ -0.94
CTDSPL2-201ENST00000260327 UNCXA6NJT0 531 aa9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 TMEM150CB9EJG8 249 aa9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 ANKRD28O15084 1053 aa9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 VEGFCP49767 419 aa9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 AKR1C2P52895 323 aa9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 RAP2BP61225 183 aa9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 AKR1C1Q04828 323 aa9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 DECR1Q16698 335 aa9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 CPZQ66K79 652 aa9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 RPL13AP3Q6NVV1 102 aa9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 NLGN4XQ8N0W4 816 aa9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 GPR150Q8NGU9 434 aa9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 NIPAL2Q9H841 368 aa9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 IL26Q9NPH9 171 aa9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 SLC7A7Q9UM01 511 aa9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 ATG4BQ9Y4P1 393 aa9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 ZNF736B4DX44 427 aaPredicted RBP9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 SOCS7O14512 581 aa9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 HOXC11O43248 304 aaPredicted RBP9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 ZNF780AO75290 641 aaPredicted RBP9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 GP1BBP13224 206 aa9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 ZNF136P52737 540 aa9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 DEFB115Q30KQ5 88 aa9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 TIGD3Q6B0B8 471 aa9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 AWAT2Q6E213 333 aa9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 GPAT4Q86UL3 456 aa9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 OR4N5Q8IXE1 308 aa9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 CAMKVQ8NCB2 501 aa9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 FOXRED1Q96CU9 486 aaPredicted RBP9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 OR14A2Q96R54 314 aa9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 B3GNT2Q9NY97 397 aa9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 MYO5AQ9Y4I1 1855 aaKnown RBP9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 FKTNO75072 461 aa9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 PEX14O75381 377 aa9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 PRKAR1BP31321 381 aa9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 CTHP32929 405 aa9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 PTGER1P34995 402 aa9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 ZNF91Q05481 1191 aa9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 PIP5KL1Q5T9C9 394 aa9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 HIST2H3PS2Q5TEC6 136 aa9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 ZNF705AQ6ZN79 300 aaPredicted RBP9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 KANSL1Q7Z3B3 1105 aa9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 C12orf57Q99622 126 aa9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 TUBB1Q9H4B7 451 aa9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 ALKBH4Q9NXW9 302 aa9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 TAF1P21675 1872 aa9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 TSPAN11A1L157 253 aa9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 EMC8O43402 210 aa9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 GAAP10253 952 aa9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 RBMS1P29558 406 aaKnown RBP9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 PCGF2P35227 344 aa9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 SRP9P49458 86 aaKnown RBP9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 CSNK2A1P68400 391 aaPredicted RBP9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 ALG10BQ5I7T1 473 aa9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 CARD17Q5XLA6 110 aa9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 NXPE4Q6UWF7 544 aa9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 BCDIN3DQ7Z5W3 292 aaKnown RBP9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 CSNK2A3Q8NEV1 391 aa9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 NEDD4LQ96PU5 975 aa9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 URM1Q9BTM9 101 aaKnown RBP9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 CXCL16Q9H2A7 254 aa9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 TCRBV5S1A1TA0A578 114 aa9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 RAD51DO75771 328 aa9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 CNOT4O95628 575 aaKnown RBP9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 CSTAP01040 98 aa9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 HLA-AP01891 365 aaKnown RBP9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 ASGR2P07307 311 aa9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 GALTP07902 379 aa9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 RHOP08100 348 aa9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 F3P13726 295 aa9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 AHRP35869 848 aa9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 GALK2Q01415 458 aa9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 RNF151Q2KHN1 245 aa9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 PDZD11Q5EBL8 140 aa9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 TTLL10Q6ZVT0 673 aa9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 OR4K14Q8NGD5 310 aa9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 OR2T11Q8NH01 316 aa9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 WFIKKN2Q8TEU8 576 aa9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 ST6GALNAC5Q9BVH7 336 aa9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 PSORS1C1Q9UIG5 152 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms