RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 KLHL22Q53GT1 634 aa17.36■□□□□ 0.37
PDLIM4-201ENST00000253754 TUBA3EQ6PEY2 450 aa17.36■□□□□ 0.37
PDLIM4-201ENST00000253754 CADM3Q8N126 398 aa17.36■□□□□ 0.37
PDLIM4-201ENST00000253754 ZNF655Q8N720 491 aaPredicted RBP17.36■□□□□ 0.37
PDLIM4-201ENST00000253754 ZFP41Q8N8Y5 198 aa17.36■□□□□ 0.37
PDLIM4-201ENST00000253754 AVL9Q8NBF6 648 aa17.36■□□□□ 0.37
PDLIM4-201ENST00000253754 OR4F15Q8NGB8 312 aa17.36■□□□□ 0.37
PDLIM4-201ENST00000253754 HTRA1Q92743 480 aa17.36■□□□□ 0.37
PDLIM4-201ENST00000253754 SPACA7Q96KW9 195 aa17.36■□□□□ 0.37
PDLIM4-201ENST00000253754 DPH1Q9BZG8 443 aa17.36■□□□□ 0.37
PDLIM4-201ENST00000253754 RACGAP1Q9H0H5 632 aa17.36■□□□□ 0.37
PDLIM4-201ENST00000253754 C20orf141Q9NUB4 165 aa17.36■□□□□ 0.37
PDLIM4-201ENST00000253754 IL20Q9NYY1 176 aa17.36■□□□□ 0.37
PDLIM4-201ENST00000253754 ZNF229Q9UJW7 825 aa17.36■□□□□ 0.37
PDLIM4-201ENST00000253754 PLOD3O60568 738 aa17.35■□□□□ 0.37
PDLIM4-201ENST00000253754 BCKDHBP21953 392 aa17.35■□□□□ 0.37
PDLIM4-201ENST00000253754 RPS4Y1P22090 263 aaKnown RBP17.35■□□□□ 0.37
PDLIM4-201ENST00000253754 CDH11P55287 796 aa17.35■□□□□ 0.37
PDLIM4-201ENST00000253754 WNT4P56705 351 aa17.35■□□□□ 0.37
PDLIM4-201ENST00000253754 DMWDQ09019 674 aa17.35■□□□□ 0.37
PDLIM4-201ENST00000253754 PGGHGQ32M88 737 aa17.35■□□□□ 0.37
PDLIM4-201ENST00000253754 B3GLCTQ6Y288 498 aa17.35■□□□□ 0.37
PDLIM4-201ENST00000253754 LHFPL3Q86UP9 236 aa17.35■□□□□ 0.37
PDLIM4-201ENST00000253754 OOSP2Q86WS3 158 aa17.35■□□□□ 0.37
PDLIM4-201ENST00000253754 CDRT4Q8N9R6 151 aa17.35■□□□□ 0.37
PDLIM4-201ENST00000253754 OR9Q1Q8NGQ5 310 aa17.35■□□□□ 0.37
PDLIM4-201ENST00000253754 FAM174AQ8TBP5 190 aa17.35■□□□□ 0.37
PDLIM4-201ENST00000253754 OSTF1Q92882 214 aa17.35■□□□□ 0.37
PDLIM4-201ENST00000253754 FAM221BA6H8Z2 402 aa17.35■□□□□ 0.37
PDLIM4-201ENST00000253754 FAM183AA6NL82 134 aa17.35■□□□□ 0.37
PDLIM4-201ENST00000253754 ZNF670-ZNF695F2Z2N8 137 aa17.35■□□□□ 0.37
PDLIM4-201ENST00000253754 CDC123O75794 336 aaPredicted RBP17.35■□□□□ 0.37
PDLIM4-201ENST00000253754 MED26O95402 600 aa17.35■□□□□ 0.37
PDLIM4-201ENST00000253754 THBS1P07996 1170 aa17.35■□□□□ 0.37
PDLIM4-201ENST00000253754 ZGLP1P0C6A0 271 aa17.35■□□□□ 0.37
PDLIM4-201ENST00000253754 LIMS3P0CW19 117 aa17.35■□□□□ 0.37
PDLIM4-201ENST00000253754 LIMS4P0CW20 117 aa17.35■□□□□ 0.37
PDLIM4-201ENST00000253754 ATXN8OSP0DMR3 200 aa17.35■□□□□ 0.37
PDLIM4-201ENST00000253754 NID1P14543 1247 aa17.35■□□□□ 0.37
PDLIM4-201ENST00000253754 MAZP56270 477 aaKnown RBP17.35■□□□□ 0.37
PDLIM4-201ENST00000253754 RPS25P62851 125 aaKnown RBP17.35■□□□□ 0.37
PDLIM4-201ENST00000253754 RACK1P63244 317 aaKnown RBP17.35■□□□□ 0.37
PDLIM4-201ENST00000253754 ZNF45Q02386 682 aa17.35■□□□□ 0.37
PDLIM4-201ENST00000253754 EIPR1Q53HC9 387 aa17.35■□□□□ 0.37
PDLIM4-201ENST00000253754 C22orf42Q6IC83 251 aa17.35■□□□□ 0.37
PDLIM4-201ENST00000253754 RANBP3LQ86VV4 465 aaPredicted RBP17.35■□□□□ 0.37
PDLIM4-201ENST00000253754 OR52R1Q8NGF1 315 aa17.35■□□□□ 0.37
PDLIM4-201ENST00000253754 ZDHHC1Q8WTX9 485 aa17.35■□□□□ 0.37
PDLIM4-201ENST00000253754 OTULINQ96BN8 352 aa17.35■□□□□ 0.37
PDLIM4-201ENST00000253754 PCED1AQ9H1Q7 454 aa17.35■□□□□ 0.37
PDLIM4-201ENST00000253754 SMURF1Q9HCE7 757 aa17.35■□□□□ 0.37
PDLIM4-201ENST00000253754 FGF20Q9NP95 211 aaPredicted RBP17.35■□□□□ 0.37
PDLIM4-201ENST00000253754 ATP13A2Q9NQ11 1180 aa17.35■□□□□ 0.37
PDLIM4-201ENST00000253754 MRPS18AQ9NVS2 196 aaKnown RBP17.35■□□□□ 0.37
PDLIM4-201ENST00000253754 TOR4AQ9NXH8 423 aa17.35■□□□□ 0.37
PDLIM4-201ENST00000253754 A0A087WV62 115 aa17.34■□□□□ 0.37
PDLIM4-201ENST00000253754 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.34■□□□□ 0.37
PDLIM4-201ENST00000253754 A0A1W2PR77 199 aa17.34■□□□□ 0.37
PDLIM4-201ENST00000253754 SMIM30A4D0T7 59 aa17.34■□□□□ 0.37
PDLIM4-201ENST00000253754 OR2W5A6NFC9 320 aa17.34■□□□□ 0.37
PDLIM4-201ENST00000253754 CBX7O95931 251 aa17.34■□□□□ 0.37
PDLIM4-201ENST00000253754 CLEC2LP0C7M8 214 aa17.34■□□□□ 0.37
PDLIM4-201ENST00000253754 MAKP20794 623 aa17.34■□□□□ 0.37
PDLIM4-201ENST00000253754 GCGRP47871 477 aa17.34■□□□□ 0.37
PDLIM4-201ENST00000253754 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.34■□□□□ 0.37
PDLIM4-201ENST00000253754 ZNF155Q12901 538 aaPredicted RBP17.34■□□□□ 0.37
PDLIM4-201ENST00000253754 OR1Q1Q15612 314 aa17.34■□□□□ 0.37
PDLIM4-201ENST00000253754 AADACL4Q5VUY2 407 aa17.34■□□□□ 0.37
PDLIM4-201ENST00000253754 TSSK4Q6SA08 328 aa17.34■□□□□ 0.37
PDLIM4-201ENST00000253754 CCDC190Q86UF4 302 aa17.34■□□□□ 0.37
PDLIM4-201ENST00000253754 POC5Q8NA72 575 aa17.34■□□□□ 0.37
PDLIM4-201ENST00000253754 MINDY2Q8NBR6 621 aa17.34■□□□□ 0.37
PDLIM4-201ENST00000253754 TM9SF2Q99805 663 aa17.34■□□□□ 0.37
PDLIM4-201ENST00000253754 LRRC61Q9BV99 259 aa17.34■□□□□ 0.37
PDLIM4-201ENST00000253754 ENKD1Q9H0I2 346 aa17.34■□□□□ 0.37
PDLIM4-201ENST00000253754 PRDM9Q9NQV7 894 aa17.34■□□□□ 0.37
PDLIM4-201ENST00000253754 DUSP22Q9NRW4 184 aa17.34■□□□□ 0.37
PDLIM4-201ENST00000253754 TXNL4BQ9NX01 149 aaKnown RBP17.34■□□□□ 0.37
PDLIM4-201ENST00000253754 HCN3Q9P1Z3 774 aa17.34■□□□□ 0.37
PDLIM4-201ENST00000253754 SSR3Q9UNL2 185 aa17.34■□□□□ 0.37
PDLIM4-201ENST00000253754 PCDHGB6Q9Y5F9 930 aa17.34■□□□□ 0.37
PDLIM4-201ENST00000253754 CDHR4A6H8M9 788 aa17.33■□□□□ 0.37
PDLIM4-201ENST00000253754 HRKO00198 91 aa17.33■□□□□ 0.37
PDLIM4-201ENST00000253754 SOCS6O14544 535 aa17.33■□□□□ 0.37
PDLIM4-201ENST00000253754 DBIP07108 87 aaKnown RBP17.33■□□□□ 0.37
PDLIM4-201ENST00000253754 TSPAN19P0C672 248 aa17.33■□□□□ 0.37
PDLIM4-201ENST00000253754 SPNP16150 400 aa17.33■□□□□ 0.37
PDLIM4-201ENST00000253754 CPEP16870 476 aa17.33■□□□□ 0.37
PDLIM4-201ENST00000253754 CD97P48960 835 aa17.33■□□□□ 0.37
PDLIM4-201ENST00000253754 FXYD6P3P58550 94 aa17.33■□□□□ 0.37
PDLIM4-201ENST00000253754 ZNF181Q2M3W8 571 aa17.33■□□□□ 0.37
PDLIM4-201ENST00000253754 POMT2Q9UKY4 750 aa17.33■□□□□ 0.37
PDLIM4-201ENST00000253754 CDH10Q9Y6N8 788 aa17.33■□□□□ 0.37
PDLIM4-201ENST00000253754 A0A0A6YYC8 382 aaPredicted RBP17.33■□□□□ 0.36
PDLIM4-201ENST00000253754 TRAPPC13A5PLN9 417 aa17.33■□□□□ 0.36
PDLIM4-201ENST00000253754 SYNDIG1LA6NDD5 238 aa17.33■□□□□ 0.36
PDLIM4-201ENST00000253754 SAGE2PA6NJ88 616 aa17.33■□□□□ 0.36
PDLIM4-201ENST00000253754 I3L1I5 382 aaPredicted RBP17.33■□□□□ 0.36
PDLIM4-201ENST00000253754 RGS5O15539 181 aa17.33■□□□□ 0.36
PDLIM4-201ENST00000253754 CHST10O43529 356 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms