RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 PEX1O43933 1283 aa11.87□□□□□ -0.51
LSM8-201ENST00000249299 TIPRLO75663 272 aa11.87□□□□□ -0.51
LSM8-201ENST00000249299 EPPINO95925 133 aa11.87□□□□□ -0.51
LSM8-201ENST00000249299 CSTAP01040 98 aa11.87□□□□□ -0.51
LSM8-201ENST00000249299 EVI2BP34910 448 aa11.87□□□□□ -0.51
LSM8-201ENST00000249299 SLC6A8P48029 635 aa11.87□□□□□ -0.51
LSM8-201ENST00000249299 RFX3P48380 749 aa11.87□□□□□ -0.51
LSM8-201ENST00000249299 GRAMD1BQ3KR37 738 aa11.87□□□□□ -0.51
LSM8-201ENST00000249299 ACER2Q5QJU3 275 aa11.87□□□□□ -0.51
LSM8-201ENST00000249299 FBXW10Q5XX13 1052 aa11.87□□□□□ -0.51
LSM8-201ENST00000249299 APLFQ8IW19 511 aaPredicted RBP11.87□□□□□ -0.51
LSM8-201ENST00000249299 LILRA2Q8N149 483 aa11.87□□□□□ -0.51
LSM8-201ENST00000249299 CLIP4Q8N3C7 705 aa11.87□□□□□ -0.51
LSM8-201ENST00000249299 SVOPLQ8N434 492 aa11.87□□□□□ -0.51
LSM8-201ENST00000249299 LSMEM1Q8N8F7 131 aa11.87□□□□□ -0.51
LSM8-201ENST00000249299 POGLUT1Q8NBL1 392 aa11.87□□□□□ -0.51
LSM8-201ENST00000249299 PHF10Q8WUB8 498 aaKnown RBP11.87□□□□□ -0.51
LSM8-201ENST00000249299 ASB15Q8WXK1 588 aa11.87□□□□□ -0.51
LSM8-201ENST00000249299 LRTOMTQ8WZ04 291 aa11.87□□□□□ -0.51
LSM8-201ENST00000249299 DHRS1Q96LJ7 313 aa11.87□□□□□ -0.51
LSM8-201ENST00000249299 LMF1Q96S06 567 aa11.87□□□□□ -0.51
LSM8-201ENST00000249299 EPYCQ99645 322 aa11.87□□□□□ -0.51
LSM8-201ENST00000249299 PKP2Q99959 881 aa11.87□□□□□ -0.51
LSM8-201ENST00000249299 TBL1XR1Q9BZK7 514 aa11.87□□□□□ -0.51
LSM8-201ENST00000249299 AMBRA1Q9C0C7 1298 aa11.87□□□□□ -0.51
LSM8-201ENST00000249299 LAT2Q9GZY6 243 aa11.87□□□□□ -0.51
LSM8-201ENST00000249299 RNF32Q9H0A6 362 aa11.87□□□□□ -0.51
LSM8-201ENST00000249299 CDCP1Q9H5V8 836 aa11.87□□□□□ -0.51
LSM8-201ENST00000249299 CPNE5Q9HCH3 593 aa11.87□□□□□ -0.51
LSM8-201ENST00000249299 CNIH4Q9P003 139 aa11.87□□□□□ -0.51
LSM8-201ENST00000249299 CNOT11Q9UKZ1 510 aaKnown RBP11.87□□□□□ -0.51
LSM8-201ENST00000249299 V9GYQ6 96 aa11.87□□□□□ -0.51
LSM8-201ENST00000249299 IGLV3-32A0A0A0MS00 114 aa11.86□□□□□ -0.51
LSM8-201ENST00000249299 A0A1W2PRQ8 180 aa11.86□□□□□ -0.51
LSM8-201ENST00000249299 PRAMEF25A6NGN4 478 aa11.86□□□□□ -0.51
LSM8-201ENST00000249299 AP3D1O14617 1153 aa11.86□□□□□ -0.51
LSM8-201ENST00000249299 ZNF264O43296 627 aa11.86□□□□□ -0.51
LSM8-201ENST00000249299 ICOSLGO75144 302 aa11.86□□□□□ -0.51
LSM8-201ENST00000249299 UBL4AP11441 157 aa11.86□□□□□ -0.51
LSM8-201ENST00000249299 UQCRBP14927 111 aa11.86□□□□□ -0.51
LSM8-201ENST00000249299 MSX1P28360 303 aa11.86□□□□□ -0.51
LSM8-201ENST00000249299 HLCSP50747 726 aa11.86□□□□□ -0.51
LSM8-201ENST00000249299 ARHGDIAP52565 204 aa11.86□□□□□ -0.51
LSM8-201ENST00000249299 SUMO3P55854 103 aaPredicted RBP11.86□□□□□ -0.51
LSM8-201ENST00000249299 RGS8P57771 180 aaPredicted RBP11.86□□□□□ -0.51
LSM8-201ENST00000249299 C17orf67Q0P5P2 114 aa11.86□□□□□ -0.51
LSM8-201ENST00000249299 CDC20Q12834 499 aa11.86□□□□□ -0.51
LSM8-201ENST00000249299 DGCR6Q14129 220 aa11.86□□□□□ -0.51
LSM8-201ENST00000249299 GLIPR1L2Q4G1C9 344 aa11.86□□□□□ -0.51
LSM8-201ENST00000249299 ABHD17BQ5VST6 288 aa11.86□□□□□ -0.51
LSM8-201ENST00000249299 SLC30A6Q6NXT4 461 aa11.86□□□□□ -0.51
LSM8-201ENST00000249299 OLIG3Q7RTU3 272 aa11.86□□□□□ -0.51
LSM8-201ENST00000249299 TSEN54Q7Z6J9 526 aaKnown RBP11.86□□□□□ -0.51
LSM8-201ENST00000249299 ZNF605Q86T29 641 aa11.86□□□□□ -0.51
LSM8-201ENST00000249299 VASH2Q86V25 355 aa11.86□□□□□ -0.51
LSM8-201ENST00000249299 LINC00471Q8N535 108 aa11.86□□□□□ -0.51
LSM8-201ENST00000249299 TMEM156Q8N614 296 aa11.86□□□□□ -0.51
LSM8-201ENST00000249299 PACRGLQ8N7B6 248 aa11.86□□□□□ -0.51
LSM8-201ENST00000249299 PIK3C3Q8NEB9 887 aa11.86□□□□□ -0.51
LSM8-201ENST00000249299 OR6T1Q8NGN1 323 aa11.86□□□□□ -0.51
LSM8-201ENST00000249299 BRIX1Q8TDN6 353 aaKnown RBP11.86□□□□□ -0.51
LSM8-201ENST00000249299 PAQR8Q8TEZ7 354 aa11.86□□□□□ -0.51
LSM8-201ENST00000249299 THAP3Q8WTV1 239 aaPredicted RBP11.86□□□□□ -0.51
LSM8-201ENST00000249299 NTNG2Q96CW9 530 aa11.86□□□□□ -0.51
LSM8-201ENST00000249299 THOC3Q96J01 351 aaKnown RBP11.86□□□□□ -0.51
LSM8-201ENST00000249299 PRRC1Q96M27 445 aa11.86□□□□□ -0.51
LSM8-201ENST00000249299 FRMD6Q96NE9 622 aa11.86□□□□□ -0.51
LSM8-201ENST00000249299 ZNF559Q9BR84 538 aa11.86□□□□□ -0.51
LSM8-201ENST00000249299 TRIM2Q9C040 744 aa11.86□□□□□ -0.51
LSM8-201ENST00000249299 CCDC86Q9H6F5 360 aaKnown RBP11.86□□□□□ -0.51
LSM8-201ENST00000249299 ZBTB20Q9HC78 741 aaPredicted RBP11.86□□□□□ -0.51
LSM8-201ENST00000249299 SH2D2AQ9NP31 389 aa11.86□□□□□ -0.51
LSM8-201ENST00000249299 DNAJB12Q9NXW2 375 aaKnown RBP11.86□□□□□ -0.51
LSM8-201ENST00000249299 NKX1-2Q9UD57 310 aaPredicted RBP11.86□□□□□ -0.51
LSM8-201ENST00000249299 ARRDC5A6NEK1 342 aa11.86□□□□□ -0.51
LSM8-201ENST00000249299 H0YJX3 145 aa11.86□□□□□ -0.51
LSM8-201ENST00000249299 GNGT2O14610 69 aa11.86□□□□□ -0.51
LSM8-201ENST00000249299 NDUFB5O43674 189 aa11.86□□□□□ -0.51
LSM8-201ENST00000249299 ZNF354AO60765 605 aaPredicted RBP11.86□□□□□ -0.51
LSM8-201ENST00000249299 OR5F1O95221 314 aa11.86□□□□□ -0.51
LSM8-201ENST00000249299 CELA2AP08217 269 aa11.86□□□□□ -0.51
LSM8-201ENST00000249299 FPR1P21462 350 aa11.86□□□□□ -0.51
LSM8-201ENST00000249299 DNAJA1P31689 397 aaKnown RBP11.86□□□□□ -0.51
LSM8-201ENST00000249299 SOX3P41225 446 aa11.86□□□□□ -0.51
LSM8-201ENST00000249299 OR1E2P47887 323 aa11.86□□□□□ -0.51
LSM8-201ENST00000249299 ZNF136P52737 540 aa11.86□□□□□ -0.51
LSM8-201ENST00000249299 ST3GAL3Q11203 375 aa11.86□□□□□ -0.51
LSM8-201ENST00000249299 TUSC1Q2TAM9 212 aa11.86□□□□□ -0.51
LSM8-201ENST00000249299 COLEC12Q5KU26 742 aa11.86□□□□□ -0.51
LSM8-201ENST00000249299 OGFRL1Q5TC84 451 aaPredicted RBP11.86□□□□□ -0.51
LSM8-201ENST00000249299 ZNF613Q6PF04 617 aa11.86□□□□□ -0.51
LSM8-201ENST00000249299 RTL4Q6ZR62 310 aa11.86□□□□□ -0.51
LSM8-201ENST00000249299 HIPK1Q86Z02 1210 aa11.86□□□□□ -0.51
LSM8-201ENST00000249299 ZDHHC13Q8IUH4 622 aa11.86□□□□□ -0.51
LSM8-201ENST00000249299 PRR22Q8IZ63 422 aa11.86□□□□□ -0.51
LSM8-201ENST00000249299 OFCC1Q8IZS5 231 aa11.86□□□□□ -0.51
LSM8-201ENST00000249299 GALNT16Q8N428 558 aa11.86□□□□□ -0.51
LSM8-201ENST00000249299 OR10Q1Q8NGQ4 319 aa11.86□□□□□ -0.51
LSM8-201ENST00000249299 ARSGQ96EG1 525 aa11.86□□□□□ -0.51
LSM8-201ENST00000249299 DTNBP1Q96EV8 351 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms