RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 AP1ARQ63HQ0 302 aa22.05■■□□□ 1.12
SDF2L1-201ENST00000248958 TNFAIP8L2Q6P589 184 aaPredicted RBP22.05■■□□□ 1.12
SDF2L1-201ENST00000248958 GATSQ8NAP1 163 aa22.05■■□□□ 1.12
SDF2L1-201ENST00000248958 LILRB4Q8NHJ6 448 aa22.05■■□□□ 1.12
SDF2L1-201ENST00000248958 B4GALNT2Q8NHY0 566 aa22.05■■□□□ 1.12
SDF2L1-201ENST00000248958 ZNF350Q9GZX5 532 aa22.05■■□□□ 1.12
SDF2L1-201ENST00000248958 STOML1Q9UBI4 398 aa22.05■■□□□ 1.12
SDF2L1-201ENST00000248958 TRIM33Q9UPN9 1127 aa22.05■■□□□ 1.12
SDF2L1-201ENST00000248958 LIPT1Q9Y234 373 aa22.05■■□□□ 1.12
SDF2L1-201ENST00000248958 HSPB2A8KAH6 182 aa22.04■■□□□ 1.12
SDF2L1-201ENST00000248958 H0Y3Z8 333 aa22.04■■□□□ 1.12
SDF2L1-201ENST00000248958 GSNP06396 782 aa22.04■■□□□ 1.12
SDF2L1-201ENST00000248958 SUMO3P55854 103 aaPredicted RBP22.04■■□□□ 1.12
SDF2L1-201ENST00000248958 EEFSECP57772 596 aaKnown RBP22.04■■□□□ 1.12
SDF2L1-201ENST00000248958 SQLEQ14534 574 aa22.04■■□□□ 1.12
SDF2L1-201ENST00000248958 CD226Q15762 336 aa22.04■■□□□ 1.12
SDF2L1-201ENST00000248958 ZNF141Q15928 474 aa22.04■■□□□ 1.12
SDF2L1-201ENST00000248958 HSPB2Q16082 182 aa22.04■■□□□ 1.12
SDF2L1-201ENST00000248958 TIGD2Q4W5G0 525 aa22.04■■□□□ 1.12
SDF2L1-201ENST00000248958 SP5Q6BEB4 398 aaPredicted RBP22.04■■□□□ 1.12
SDF2L1-201ENST00000248958 RNF130Q86XS8 419 aa22.04■■□□□ 1.12
SDF2L1-201ENST00000248958 ZFP90Q8TF47 636 aa22.04■■□□□ 1.12
SDF2L1-201ENST00000248958 ZBTB8AQ96BR9 441 aa22.04■■□□□ 1.12
SDF2L1-201ENST00000248958 ROPN1LQ96C74 230 aa22.04■■□□□ 1.12
SDF2L1-201ENST00000248958 WDR45Q9Y484 360 aa22.04■■□□□ 1.12
SDF2L1-201ENST00000248958 NPIPA5A0A0B4J1W7 369 aa22.03■■□□□ 1.12
SDF2L1-201ENST00000248958 NPIPA7E9PJI5 369 aa22.03■■□□□ 1.12
SDF2L1-201ENST00000248958 IL2RAP01589 272 aa22.03■■□□□ 1.12
SDF2L1-201ENST00000248958 NPIPA8P0DM63 369 aa22.03■■□□□ 1.12
SDF2L1-201ENST00000248958 ZNF17P17021 662 aa22.03■■□□□ 1.12
SDF2L1-201ENST00000248958 P2RX1P51575 399 aa22.03■■□□□ 1.12
SDF2L1-201ENST00000248958 ZNF41P51814 821 aaPredicted RBP22.03■■□□□ 1.12
SDF2L1-201ENST00000248958 CASP9P55211 416 aa22.03■■□□□ 1.12
SDF2L1-201ENST00000248958 HPCAP84074 193 aa22.03■■□□□ 1.12
SDF2L1-201ENST00000248958 GPR68Q15743 365 aa22.03■■□□□ 1.12
SDF2L1-201ENST00000248958 BLOC1S3Q6QNY0 202 aa22.03■■□□□ 1.12
SDF2L1-201ENST00000248958 MEIOBQ8N635 442 aa22.03■■□□□ 1.12
SDF2L1-201ENST00000248958 RAB8BQ92930 207 aa22.03■■□□□ 1.12
SDF2L1-201ENST00000248958 UCN2Q96RP3 112 aa22.03■■□□□ 1.12
SDF2L1-201ENST00000248958 TRIB1Q96RU8 372 aa22.03■■□□□ 1.12
SDF2L1-201ENST00000248958 SAP130Q9H0E3 1048 aa22.03■■□□□ 1.12
SDF2L1-201ENST00000248958 NPHS2Q9NP85 383 aa22.03■■□□□ 1.12
SDF2L1-201ENST00000248958 A0A0G2JNJ9 132 aa22.02■■□□□ 1.12
SDF2L1-201ENST00000248958 OR2M5A3KFT3 312 aa22.02■■□□□ 1.12
SDF2L1-201ENST00000248958 GTPBP1O00178 669 aaKnown RBP22.02■■□□□ 1.12
SDF2L1-201ENST00000248958 HMGN4O00479 90 aa22.02■■□□□ 1.12
SDF2L1-201ENST00000248958 HCRTR2O43614 444 aa22.02■■□□□ 1.12
SDF2L1-201ENST00000248958 EIF4E2O60573 245 aaKnown RBP22.02■■□□□ 1.12
SDF2L1-201ENST00000248958 POU3F2P20265 443 aaPredicted RBP22.02■■□□□ 1.12
SDF2L1-201ENST00000248958 TCEA1P23193 301 aaKnown RBP22.02■■□□□ 1.12
SDF2L1-201ENST00000248958 COL8A1P27658 744 aa22.02■■□□□ 1.12
SDF2L1-201ENST00000248958 CEACAM8P31997 349 aaPredicted RBP22.02■■□□□ 1.12
SDF2L1-201ENST00000248958 ADH7P40394 386 aa22.02■■□□□ 1.12
SDF2L1-201ENST00000248958 STARP49675 285 aa22.02■■□□□ 1.12
SDF2L1-201ENST00000248958 CLDN18P56856 261 aa22.02■■□□□ 1.12
SDF2L1-201ENST00000248958 SRYQ05066 204 aa22.02■■□□□ 1.12
SDF2L1-201ENST00000248958 TMEM44Q2T9K0 475 aa22.02■■□□□ 1.12
SDF2L1-201ENST00000248958 C6orf10Q5SRN2 563 aa22.02■■□□□ 1.12
SDF2L1-201ENST00000248958 ZNF614Q8N883 585 aa22.02■■□□□ 1.12
SDF2L1-201ENST00000248958 VPS33AQ96AX1 596 aa22.02■■□□□ 1.12
SDF2L1-201ENST00000248958 CCDC167Q9P0B6 97 aa22.02■■□□□ 1.12
SDF2L1-201ENST00000248958 Q9UFV3 132 aa22.02■■□□□ 1.12
SDF2L1-201ENST00000248958 DCTN4Q9UJW0 460 aa22.02■■□□□ 1.12
SDF2L1-201ENST00000248958 MKLN1Q9UL63 735 aa22.02■■□□□ 1.12
SDF2L1-201ENST00000248958 VDAC3Q9Y277 283 aa22.02■■□□□ 1.12
SDF2L1-201ENST00000248958 AP4B1Q9Y6B7 739 aa22.02■■□□□ 1.12
SDF2L1-201ENST00000248958 C7orf72A4D263 438 aa22.01■■□□□ 1.11
SDF2L1-201ENST00000248958 MBD3L4A6NDZ8 208 aaPredicted RBP22.01■■□□□ 1.11
SDF2L1-201ENST00000248958 MBD3L3A6NE82 208 aaPredicted RBP22.01■■□□□ 1.11
SDF2L1-201ENST00000248958 MBD3L5A6NJ08 208 aaPredicted RBP22.01■■□□□ 1.11
SDF2L1-201ENST00000248958 ZNF264O43296 627 aa22.01■■□□□ 1.11
SDF2L1-201ENST00000248958 GMFGO60234 142 aa22.01■■□□□ 1.11
SDF2L1-201ENST00000248958 FCMRO60667 390 aa22.01■■□□□ 1.11
SDF2L1-201ENST00000248958 TROVE2P10155 538 aaKnown RBP eCLIP22.01■■□□□ 1.11
SDF2L1-201ENST00000248958 ZNF117Q03924 483 aa22.01■■□□□ 1.11
SDF2L1-201ENST00000248958 CDSNQ15517 529 aa22.01■■□□□ 1.11
SDF2L1-201ENST00000248958 GPAT3Q53EU6 434 aa22.01■■□□□ 1.11
SDF2L1-201ENST00000248958 DDX59Q5T1V6 619 aaKnown RBP eCLIP22.01■■□□□ 1.11
SDF2L1-201ENST00000248958 METTL21CQ5VZV1 264 aa22.01■■□□□ 1.11
SDF2L1-201ENST00000248958 TYW3Q6IPR3 259 aaKnown RBP22.01■■□□□ 1.11
SDF2L1-201ENST00000248958 ARSKQ6UWY0 536 aa22.01■■□□□ 1.11
SDF2L1-201ENST00000248958 SEM1Q6ZVN7 128 aa22.01■■□□□ 1.11
SDF2L1-201ENST00000248958 CHMP1BQ7LBR1 199 aa22.01■■□□□ 1.11
SDF2L1-201ENST00000248958 CCDC71Q8IV32 467 aaPredicted RBP22.01■■□□□ 1.11
SDF2L1-201ENST00000248958 FUNDC1Q8IVP5 155 aa22.01■■□□□ 1.11
SDF2L1-201ENST00000248958 ZNF619Q8N2I2 560 aa22.01■■□□□ 1.11
SDF2L1-201ENST00000248958 TOR1AIP2Q8NFQ8 470 aa22.01■■□□□ 1.11
SDF2L1-201ENST00000248958 MBD3L2Q8NHZ7 208 aaPredicted RBP22.01■■□□□ 1.11
SDF2L1-201ENST00000248958 GTF2H4Q92759 462 aa22.01■■□□□ 1.11
SDF2L1-201ENST00000248958 PMM1Q92871 262 aa22.01■■□□□ 1.11
SDF2L1-201ENST00000248958 SPDL1Q96EA4 605 aa22.01■■□□□ 1.11
SDF2L1-201ENST00000248958 SH3YL1Q96HL8 342 aaPredicted RBP22.01■■□□□ 1.11
SDF2L1-201ENST00000248958 TUBA1CQ9BQE3 449 aa22.01■■□□□ 1.11
SDF2L1-201ENST00000248958 RAD21L1Q9H4I0 556 aa22.01■■□□□ 1.11
SDF2L1-201ENST00000248958 RUBCNLQ9H714 662 aa22.01■■□□□ 1.11
SDF2L1-201ENST00000248958 TPT1P8Q9HAU6 139 aa22.01■■□□□ 1.11
SDF2L1-201ENST00000248958 KCNJ16Q9NPI9 418 aa22.01■■□□□ 1.11
SDF2L1-201ENST00000248958 MED17Q9NVC6 651 aa22.01■■□□□ 1.11
SDF2L1-201ENST00000248958 THUMPD1Q9NXG2 353 aaKnown RBP22.01■■□□□ 1.11
SDF2L1-201ENST00000248958 ZNF337Q9Y3M9 751 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms