RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 ZNF141Q15928 474 aa17.09■□□□□ 0.33
HOXC11-201ENST00000243082 RNLSQ5VYX0 342 aa17.09■□□□□ 0.33
HOXC11-201ENST00000243082 SLC30A6Q6NXT4 461 aa17.09■□□□□ 0.33
HOXC11-201ENST00000243082 MED25Q71SY5 747 aa17.09■□□□□ 0.33
HOXC11-201ENST00000243082 ZNF614Q8N883 585 aa17.09■□□□□ 0.33
HOXC11-201ENST00000243082 PFN4Q8NHR9 129 aa17.09■□□□□ 0.33
HOXC11-201ENST00000243082 SLC41A2Q96JW4 573 aa17.09■□□□□ 0.33
HOXC11-201ENST00000243082 PTCHD1Q96NR3 888 aa17.09■□□□□ 0.33
HOXC11-201ENST00000243082 ZNF559Q9BR84 538 aa17.09■□□□□ 0.33
HOXC11-201ENST00000243082 Q9N2J8 555 aa17.09■□□□□ 0.33
HOXC11-201ENST00000243082 TBC1D23Q9NUY8 699 aa17.09■□□□□ 0.33
HOXC11-201ENST00000243082 DNAJB12Q9NXW2 375 aaKnown RBP17.09■□□□□ 0.33
HOXC11-201ENST00000243082 DHCR7Q9UBM7 475 aaKnown RBP17.09■□□□□ 0.33
HOXC11-201ENST00000243082 GPR52Q9Y2T5 361 aa17.09■□□□□ 0.33
HOXC11-201ENST00000243082 PMF1-BGLAPU3KQ54 211 aa17.09■□□□□ 0.33
HOXC11-201ENST00000243082 CABIN1Q9Y6J0 2220 aa17.09■□□□□ 0.33
HOXC11-201ENST00000243082 ARID1BQ8NFD5 2236 aaPredicted RBP17.08■□□□□ 0.33
HOXC11-201ENST00000243082 CKMT1AP12532 417 aa17.08■□□□□ 0.33
HOXC11-201ENST00000243082 ACAA2P42765 397 aaKnown RBP17.08■□□□□ 0.33
HOXC11-201ENST00000243082 LIMK1P53667 647 aa17.08■□□□□ 0.33
HOXC11-201ENST00000243082 GAS1P54826 345 aa17.08■□□□□ 0.33
HOXC11-201ENST00000243082 BIKQ13323 160 aa17.08■□□□□ 0.33
HOXC11-201ENST00000243082 NNATQ16517 81 aa17.08■□□□□ 0.33
HOXC11-201ENST00000243082 ZNF829Q3KNS6 432 aaPredicted RBP17.08■□□□□ 0.33
HOXC11-201ENST00000243082 ZNF613Q6PF04 617 aa17.08■□□□□ 0.33
HOXC11-201ENST00000243082 MAMSTRQ6ZN01 415 aa17.08■□□□□ 0.33
HOXC11-201ENST00000243082 CLDN22Q8N7P3 220 aa17.08■□□□□ 0.33
HOXC11-201ENST00000243082 ZSCAN1Q8NBB4 408 aa17.08■□□□□ 0.33
HOXC11-201ENST00000243082 MVB12AQ96EY5 273 aa17.08■□□□□ 0.33
HOXC11-201ENST00000243082 SLC38A2Q96QD8 506 aa17.08■□□□□ 0.33
HOXC11-201ENST00000243082 PELOQ9BRX2 385 aaKnown RBP17.08■□□□□ 0.33
HOXC11-201ENST00000243082 KRCC1Q9NPI7 259 aaPredicted RBP17.08■□□□□ 0.33
HOXC11-201ENST00000243082 C20orf141Q9NUB4 165 aa17.08■□□□□ 0.33
HOXC11-201ENST00000243082 FLRT3Q9NZU0 649 aa17.08■□□□□ 0.33
HOXC11-201ENST00000243082 CDH10Q9Y6N8 788 aa17.08■□□□□ 0.33
HOXC11-201ENST00000243082 A8MU76 341 aa17.08■□□□□ 0.32
HOXC11-201ENST00000243082 MAKP20794 623 aa17.08■□□□□ 0.32
HOXC11-201ENST00000243082 RHAGQ02094 409 aa17.08■□□□□ 0.32
HOXC11-201ENST00000243082 C19orf48Q6RUI8 117 aa17.08■□□□□ 0.32
HOXC11-201ENST00000243082 SLC34A3Q8N130 599 aa17.08■□□□□ 0.32
HOXC11-201ENST00000243082 OR52I1Q8NGK6 324 aa17.08■□□□□ 0.32
HOXC11-201ENST00000243082 PTPMT1Q8WUK0 201 aaPredicted RBP17.08■□□□□ 0.32
HOXC11-201ENST00000243082 IER2Q9BTL4 223 aa17.08■□□□□ 0.32
HOXC11-201ENST00000243082 G6PC3Q9BUM1 346 aa17.08■□□□□ 0.32
HOXC11-201ENST00000243082 YIPF2Q9BWQ6 316 aa17.08■□□□□ 0.32
HOXC11-201ENST00000243082 DPH1Q9BZG8 443 aa17.08■□□□□ 0.32
HOXC11-201ENST00000243082 TMEM27Q9HBJ8 222 aa17.08■□□□□ 0.32
HOXC11-201ENST00000243082 ATP13A2Q9NQ11 1180 aa17.08■□□□□ 0.32
HOXC11-201ENST00000243082 C14orf105Q9NVL8 296 aa17.08■□□□□ 0.32
HOXC11-201ENST00000243082 MRPS18AQ9NVS2 196 aaKnown RBP17.08■□□□□ 0.32
HOXC11-201ENST00000243082 GMEB2Q9UKD1 530 aa17.08■□□□□ 0.32
HOXC11-201ENST00000243082 CBLCQ9ULV8 474 aa17.08■□□□□ 0.32
HOXC11-201ENST00000243082 ERGIC3Q9Y282 383 aa17.08■□□□□ 0.32
HOXC11-201ENST00000243082 PCDHGA3Q9Y5H0 932 aa17.08■□□□□ 0.32
HOXC11-201ENST00000243082 A0A0B4J2E0 115 aa17.07■□□□□ 0.32
HOXC11-201ENST00000243082 A0A1B0GX12 115 aa17.07■□□□□ 0.32
HOXC11-201ENST00000243082 C17orf105B2RV13 164 aa17.07■□□□□ 0.32
HOXC11-201ENST00000243082 SURF4O15260 269 aa17.07■□□□□ 0.32
HOXC11-201ENST00000243082 PRODHO43272 600 aa17.07■□□□□ 0.32
HOXC11-201ENST00000243082 CH25HO95992 272 aa17.07■□□□□ 0.32
HOXC11-201ENST00000243082 RPLP0P05388 317 aaKnown RBP17.07■□□□□ 0.32
HOXC11-201ENST00000243082 HOXA6P31267 233 aa17.07■□□□□ 0.32
HOXC11-201ENST00000243082 ARRB1P49407 418 aaPredicted RBP17.07■□□□□ 0.32
HOXC11-201ENST00000243082 CLK1P49759 484 aaKnown RBP17.07■□□□□ 0.32
HOXC11-201ENST00000243082 PRKCDQ05655 676 aa17.07■□□□□ 0.32
HOXC11-201ENST00000243082 FGFBP1Q14512 234 aa17.07■□□□□ 0.32
HOXC11-201ENST00000243082 DGUOKQ16854 277 aa17.07■□□□□ 0.32
HOXC11-201ENST00000243082 LYSMD4Q5XG99 296 aa17.07■□□□□ 0.32
HOXC11-201ENST00000243082 WDR74Q6RFH5 385 aaPredicted RBP17.07■□□□□ 0.32
HOXC11-201ENST00000243082 PRSS42Q7Z5A4 293 aa17.07■□□□□ 0.32
HOXC11-201ENST00000243082 ARHGAP22Q7Z5H3 698 aa17.07■□□□□ 0.32
HOXC11-201ENST00000243082 DEFB123Q8N688 67 aa17.07■□□□□ 0.32
HOXC11-201ENST00000243082 BCORP1Q8N888 145 aa17.07■□□□□ 0.32
HOXC11-201ENST00000243082 ZHX1-C8orf76Q96EF9 292 aa17.07■□□□□ 0.32
HOXC11-201ENST00000243082 SENP5Q96HI0 755 aaPredicted RBP17.07■□□□□ 0.32
HOXC11-201ENST00000243082 SAMD8Q96LT4 415 aa17.07■□□□□ 0.32
HOXC11-201ENST00000243082 OR1F2PQ96R84 312 aa17.07■□□□□ 0.32
HOXC11-201ENST00000243082 OR51E2Q9H255 320 aa17.07■□□□□ 0.32
HOXC11-201ENST00000243082 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.07■□□□□ 0.32
HOXC11-201ENST00000243082 SIDT1Q9NXL6 827 aaKnown RBP17.07■□□□□ 0.32
HOXC11-201ENST00000243082 IL20RAQ9UHF4 553 aa17.07■□□□□ 0.32
HOXC11-201ENST00000243082 MUTYHQ9UIF7 546 aa17.07■□□□□ 0.32
HOXC11-201ENST00000243082 OSGIN1Q9UJX0 560 aa17.07■□□□□ 0.32
HOXC11-201ENST00000243082 DIMT1Q9UNQ2 313 aaKnown RBP17.07■□□□□ 0.32
HOXC11-201ENST00000243082 MMACHCQ9Y4U1 282 aa17.07■□□□□ 0.32
HOXC11-201ENST00000243082 COL6A3P12111 3177 aa17.07■□□□□ 0.32
HOXC11-201ENST00000243082 UNC13CQ8NB66 2214 aa17.07■□□□□ 0.32
HOXC11-201ENST00000243082 CCDC163A0A0D9SF12 145 aa17.06■□□□□ 0.32
HOXC11-201ENST00000243082 UNC119BA6NIH7 251 aa17.06■□□□□ 0.32
HOXC11-201ENST00000243082 KDM4EB2RXH2 506 aaPredicted RBP17.06■□□□□ 0.32
HOXC11-201ENST00000243082 CSO75390 466 aaKnown RBP17.06■□□□□ 0.32
HOXC11-201ENST00000243082 NADKO95544 446 aaPredicted RBP17.06■□□□□ 0.32
HOXC11-201ENST00000243082 ZGLP1P0C6A0 271 aa17.06■□□□□ 0.32
HOXC11-201ENST00000243082 FUT1P19526 365 aa17.06■□□□□ 0.32
HOXC11-201ENST00000243082 UGT2B10P36537 528 aa17.06■□□□□ 0.32
HOXC11-201ENST00000243082 DHPSP49366 369 aaPredicted RBP17.06■□□□□ 0.32
HOXC11-201ENST00000243082 ATP12AP54707 1039 aa17.06■□□□□ 0.32
HOXC11-201ENST00000243082 FXYD6P3P58550 94 aa17.06■□□□□ 0.32
HOXC11-201ENST00000243082 TSTQ16762 297 aaKnown RBP17.06■□□□□ 0.32
HOXC11-201ENST00000243082 PGGHGQ32M88 737 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms