RNA–Protein interactions for RNA: ENST00000238112.7

CPSF3-201, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-201ENST00000238112 ING3Q9NXR8 418 aa17.42■□□□□ 0.38
CPSF3-201ENST00000238112 DOCK9Q9BZ29 2069 aa17.42■□□□□ 0.38
CPSF3-201ENST00000238112 DAPL1A0PJW8 107 aa17.42■□□□□ 0.38
CPSF3-201ENST00000238112 ZC3H12DA2A288 527 aaKnown RBP17.42■□□□□ 0.38
CPSF3-201ENST00000238112 DVL2O14641 736 aa17.42■□□□□ 0.38
CPSF3-201ENST00000238112 THBS1P07996 1170 aa17.42■□□□□ 0.38
CPSF3-201ENST00000238112 TALDO1P37837 337 aa17.42■□□□□ 0.38
CPSF3-201ENST00000238112 SOX9P48436 509 aa17.42■□□□□ 0.38
CPSF3-201ENST00000238112 KLHL12Q53G59 568 aa17.42■□□□□ 0.38
CPSF3-201ENST00000238112 SNAP47Q5SQN1 464 aa17.42■□□□□ 0.38
CPSF3-201ENST00000238112 VASH1Q7L8A9 365 aaPredicted RBP17.42■□□□□ 0.38
CPSF3-201ENST00000238112 ZCCHC10Q8TBK6 192 aa17.42■□□□□ 0.38
CPSF3-201ENST00000238112 HS6ST2Q96MM7 605 aa17.42■□□□□ 0.38
CPSF3-201ENST00000238112 SDF2Q99470 211 aa17.42■□□□□ 0.38
CPSF3-201ENST00000238112 MARVELD1Q9BSK0 173 aa17.42■□□□□ 0.38
CPSF3-201ENST00000238112 WACQ9BTA9 647 aa17.42■□□□□ 0.38
CPSF3-201ENST00000238112 APOOQ9BUR5 198 aa17.42■□□□□ 0.38
CPSF3-201ENST00000238112 SIDT1Q9NXL6 827 aaKnown RBP17.42■□□□□ 0.38
CPSF3-201ENST00000238112 LOC102723532A0A0G2JNH3 316 aa17.41■□□□□ 0.38
CPSF3-201ENST00000238112 CENPVL1A0A0U1RR11 272 aa17.41■□□□□ 0.38
CPSF3-201ENST00000238112 SLC43A1O75387 559 aa17.41■□□□□ 0.38
CPSF3-201ENST00000238112 CHRNB1P11230 501 aa17.41■□□□□ 0.38
CPSF3-201ENST00000238112 MAT2AP31153 395 aaKnown RBP17.41■□□□□ 0.38
CPSF3-201ENST00000238112 SIM1P81133 766 aaPredicted RBP17.41■□□□□ 0.38
CPSF3-201ENST00000238112 FAPQ12884 760 aa17.41■□□□□ 0.38
CPSF3-201ENST00000238112 C2orf27AQ580R0 203 aa17.41■□□□□ 0.38
CPSF3-201ENST00000238112 Q5BKY6 102 aa17.41■□□□□ 0.38
CPSF3-201ENST00000238112 HBMQ6B0K9 141 aa17.41■□□□□ 0.38
CPSF3-201ENST00000238112 SYCE2Q6PIF2 218 aa17.41■□□□□ 0.38
CPSF3-201ENST00000238112 NUDT18Q6ZVK8 323 aa17.41■□□□□ 0.38
CPSF3-201ENST00000238112 TMEM99Q8N816 258 aa17.41■□□□□ 0.38
CPSF3-201ENST00000238112 ZFPM2Q8WW38 1151 aa17.41■□□□□ 0.38
CPSF3-201ENST00000238112 TRIM63Q969Q1 353 aa17.41■□□□□ 0.38
CPSF3-201ENST00000238112 PRSS27Q9BQR3 290 aa17.41■□□□□ 0.38
CPSF3-201ENST00000238112 C1QTNF7Q9BXJ2 289 aa17.41■□□□□ 0.38
CPSF3-201ENST00000238112 TRPV5Q9NQA5 729 aa17.41■□□□□ 0.38
CPSF3-201ENST00000238112 OBP2AQ9NY56 170 aa17.41■□□□□ 0.38
CPSF3-201ENST00000238112 MDC1Q14676 2089 aaKnown RBP17.41■□□□□ 0.38
CPSF3-201ENST00000238112 C5orf67F2Z3F1 127 aa17.41■□□□□ 0.38
CPSF3-201ENST00000238112 SNRNP200O75643 2136 aaKnown RBP17.41■□□□□ 0.38
CPSF3-201ENST00000238112 APODP05090 189 aa17.41■□□□□ 0.38
CPSF3-201ENST00000238112 IFI30P13284 250 aa17.41■□□□□ 0.38
CPSF3-201ENST00000238112 FUT1P19526 365 aa17.41■□□□□ 0.38
CPSF3-201ENST00000238112 F8A1P23610 371 aa17.41■□□□□ 0.38
CPSF3-201ENST00000238112 TLX1P31314 330 aaPredicted RBP17.41■□□□□ 0.38
CPSF3-201ENST00000238112 RPS7P62081 194 aaKnown RBP17.41■□□□□ 0.38
CPSF3-201ENST00000238112 EFR3AQ14156 821 aa17.41■□□□□ 0.38
CPSF3-201ENST00000238112 SUZ12Q15022 739 aaKnown RBP17.41■□□□□ 0.38
CPSF3-201ENST00000238112 TCEA2Q15560 299 aa17.41■□□□□ 0.38
CPSF3-201ENST00000238112 PRPF38BQ5VTL8 546 aaKnown RBP17.41■□□□□ 0.38
CPSF3-201ENST00000238112 ZNF776Q68DI1 518 aaPredicted RBP17.41■□□□□ 0.38
CPSF3-201ENST00000238112 OR10H4Q8NGA5 316 aa17.41■□□□□ 0.38
CPSF3-201ENST00000238112 PFN4Q8NHR9 129 aa17.41■□□□□ 0.38
CPSF3-201ENST00000238112 NT5CQ8TCD5 201 aa17.41■□□□□ 0.38
CPSF3-201ENST00000238112 ZFAND1Q8TCF1 268 aa17.41■□□□□ 0.38
CPSF3-201ENST00000238112 TMEM239Q8WW34 195 aa17.41■□□□□ 0.38
CPSF3-201ENST00000238112 BADQ92934 168 aa17.41■□□□□ 0.38
CPSF3-201ENST00000238112 SIRT4Q9Y6E7 314 aaPredicted RBP17.41■□□□□ 0.38
CPSF3-201ENST00000238112 A0A0G2JMP0 313 aa17.4■□□□□ 0.38
CPSF3-201ENST00000238112 A0A0X1KG70 313 aa17.4■□□□□ 0.38
CPSF3-201ENST00000238112 FAM86C2PA6NEL3 165 aa17.4■□□□□ 0.38
CPSF3-201ENST00000238112 BHLHE40O14503 412 aa17.4■□□□□ 0.38
CPSF3-201ENST00000238112 NARSO43776 548 aaKnown RBP17.4■□□□□ 0.38
CPSF3-201ENST00000238112 GKN3PP0CG01 181 aa17.4■□□□□ 0.38
CPSF3-201ENST00000238112 PRG2P13727 222 aa17.4■□□□□ 0.38
CPSF3-201ENST00000238112 MAKP20794 623 aa17.4■□□□□ 0.38
CPSF3-201ENST00000238112 FCARP24071 287 aa17.4■□□□□ 0.38
CPSF3-201ENST00000238112 SLC16A1P53985 500 aa17.4■□□□□ 0.38
CPSF3-201ENST00000238112 DEFB134Q4QY38 66 aa17.4■□□□□ 0.38
CPSF3-201ENST00000238112 TMEM240Q5SV17 173 aa17.4■□□□□ 0.38
CPSF3-201ENST00000238112 TRILQ7L0X0 811 aa17.4■□□□□ 0.38
CPSF3-201ENST00000238112 NR2C2APQ86WQ0 139 aa17.4■□□□□ 0.38
CPSF3-201ENST00000238112 LRRC28Q86X40 367 aaPredicted RBP17.4■□□□□ 0.38
CPSF3-201ENST00000238112 LIX1LQ8IVB5 337 aa17.4■□□□□ 0.38
CPSF3-201ENST00000238112 RNF113BQ8IZP6 322 aaKnown RBP17.4■□□□□ 0.38
CPSF3-201ENST00000238112 OR4M2Q8NGB6 313 aa17.4■□□□□ 0.38
CPSF3-201ENST00000238112 OR5M3Q8NGP4 307 aa17.4■□□□□ 0.38
CPSF3-201ENST00000238112 OR5W2Q8NH69 310 aa17.4■□□□□ 0.38
CPSF3-201ENST00000238112 GFM1Q96RP9 751 aaKnown RBP17.4■□□□□ 0.38
CPSF3-201ENST00000238112 GON7Q9BXV9 100 aa17.4■□□□□ 0.38
CPSF3-201ENST00000238112 ARHGEF9O43307 516 aa17.39■□□□□ 0.38
CPSF3-201ENST00000238112 ARSBP15848 533 aa17.39■□□□□ 0.38
CPSF3-201ENST00000238112 HTR2AP28223 471 aa17.39■□□□□ 0.38
CPSF3-201ENST00000238112 GALEQ14376 348 aa17.39■□□□□ 0.38
CPSF3-201ENST00000238112 OR1Q1Q15612 314 aa17.39■□□□□ 0.38
CPSF3-201ENST00000238112 ARL9Q6T311 187 aa17.39■□□□□ 0.38
CPSF3-201ENST00000238112 NANOGNBQ7Z5D8 188 aa17.39■□□□□ 0.38
CPSF3-201ENST00000238112 YAF2Q8IY57 180 aa17.39■□□□□ 0.38
CPSF3-201ENST00000238112 CDK20Q8IZL9 346 aa17.39■□□□□ 0.38
CPSF3-201ENST00000238112 ZNF619Q8N2I2 560 aa17.39■□□□□ 0.38
CPSF3-201ENST00000238112 UBL7Q96S82 380 aaPredicted RBP17.39■□□□□ 0.38
CPSF3-201ENST00000238112 SERINC2Q96SA4 455 aa17.39■□□□□ 0.38
CPSF3-201ENST00000238112 ZNF350Q9GZX5 532 aa17.39■□□□□ 0.38
CPSF3-201ENST00000238112 NIPAL2Q9H841 368 aa17.39■□□□□ 0.38
CPSF3-201ENST00000238112 FGF22Q9HCT0 170 aa17.39■□□□□ 0.38
CPSF3-201ENST00000238112 ADAP2Q9NPF8 381 aa17.39■□□□□ 0.38
CPSF3-201ENST00000238112 ATP13A2Q9NQ11 1180 aa17.39■□□□□ 0.38
CPSF3-201ENST00000238112 C20orf141Q9NUB4 165 aa17.39■□□□□ 0.38
CPSF3-201ENST00000238112 ACOXLQ9NUZ1 547 aa17.39■□□□□ 0.38
CPSF3-201ENST00000238112 GDE1Q9NZC3 331 aa17.39■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms