RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 LCN1P31025 176 aa12.81□□□□□ -0.36
GPN3-201ENST00000228827 CPOXP36551 454 aa12.81□□□□□ -0.36
GPN3-201ENST00000228827 ZNF41P51814 821 aaPredicted RBP12.81□□□□□ -0.36
GPN3-201ENST00000228827 CASP9P55211 416 aa12.81□□□□□ -0.36
GPN3-201ENST00000228827 NME5P56597 212 aa12.81□□□□□ -0.36
GPN3-201ENST00000228827 C21orf58P58505 322 aa12.81□□□□□ -0.36
GPN3-201ENST00000228827 RPS3AP61247 264 aaKnown RBP12.81□□□□□ -0.36
GPN3-201ENST00000228827 PON3Q15166 354 aa12.81□□□□□ -0.36
GPN3-201ENST00000228827 SGCBQ16585 318 aa12.81□□□□□ -0.36
GPN3-201ENST00000228827 TMEM44Q2T9K0 475 aa12.81□□□□□ -0.36
GPN3-201ENST00000228827 VWA1Q6PCB0 445 aa12.81□□□□□ -0.36
GPN3-201ENST00000228827 CAMKMTQ7Z624 323 aa12.81□□□□□ -0.36
GPN3-201ENST00000228827 MISPQ8IVT2 679 aa12.81□□□□□ -0.36
GPN3-201ENST00000228827 OR4A15Q8NGL6 344 aa12.81□□□□□ -0.36
GPN3-201ENST00000228827 B4GALNT2Q8NHY0 566 aa12.81□□□□□ -0.36
GPN3-201ENST00000228827 FNDC9Q8TBE3 224 aa12.81□□□□□ -0.36
GPN3-201ENST00000228827 MOAP1Q96BY2 351 aa12.81□□□□□ -0.36
GPN3-201ENST00000228827 CLEC4MQ9H2X3 399 aaPredicted RBP12.81□□□□□ -0.36
GPN3-201ENST00000228827 TMEM185BQ9H7F4 350 aa12.81□□□□□ -0.36
GPN3-201ENST00000228827 PACSIN3Q9UKS6 424 aa12.81□□□□□ -0.36
GPN3-201ENST00000228827 A0A087WZY1 265 aa12.8□□□□□ -0.36
GPN3-201ENST00000228827 RNF103-CHMP3A0A140T963 221 aa12.8□□□□□ -0.36
GPN3-201ENST00000228827 A0A1W2PQD3 144 aa12.8□□□□□ -0.36
GPN3-201ENST00000228827 TMEM120BA0PK00 339 aa12.8□□□□□ -0.36
GPN3-201ENST00000228827 OIP5O43482 229 aa12.8□□□□□ -0.36
GPN3-201ENST00000228827 TNFRSF21O75509 655 aa12.8□□□□□ -0.36
GPN3-201ENST00000228827 SNUPNO95149 360 aaKnown RBP12.8□□□□□ -0.36
GPN3-201ENST00000228827 LBPP18428 481 aa12.8□□□□□ -0.36
GPN3-201ENST00000228827 MATN1P21941 496 aa12.8□□□□□ -0.36
GPN3-201ENST00000228827 EIF1AXP47813 144 aaKnown RBP12.8□□□□□ -0.36
GPN3-201ENST00000228827 WDR4P57081 412 aaKnown RBP12.8□□□□□ -0.36
GPN3-201ENST00000228827 ZNF117Q03924 483 aa12.8□□□□□ -0.36
GPN3-201ENST00000228827 PLPPR5Q32ZL2 321 aa12.8□□□□□ -0.36
GPN3-201ENST00000228827 FBXW10Q5XX13 1052 aa12.8□□□□□ -0.36
GPN3-201ENST00000228827 OR2A2Q6IF42 318 aa12.8□□□□□ -0.36
GPN3-201ENST00000228827 C6orf120Q7Z4R8 191 aa12.8□□□□□ -0.36
GPN3-201ENST00000228827 GGNQ86UU5 652 aa12.8□□□□□ -0.36
GPN3-201ENST00000228827 ANKRD46Q86W74 232 aa12.8□□□□□ -0.36
GPN3-201ENST00000228827 METTL25Q8N6Q8 603 aa12.8□□□□□ -0.36
GPN3-201ENST00000228827 ZNF614Q8N883 585 aa12.8□□□□□ -0.36
GPN3-201ENST00000228827 STARD4Q96DR4 205 aa12.8□□□□□ -0.36
GPN3-201ENST00000228827 RNF145Q96MT1 663 aa12.8□□□□□ -0.36
GPN3-201ENST00000228827 PIGMQ9H3S5 423 aa12.8□□□□□ -0.36
GPN3-201ENST00000228827 LIME1Q9H400 295 aa12.8□□□□□ -0.36
GPN3-201ENST00000228827 SERHL2Q9H4I8 314 aa12.8□□□□□ -0.36
GPN3-201ENST00000228827 RASSF1Q9NS23 344 aa12.8□□□□□ -0.36
GPN3-201ENST00000228827 MARCOQ9UEW3 520 aaPredicted RBP12.8□□□□□ -0.36
GPN3-201ENST00000228827 CARD8Q9Y2G2 431 aa12.8□□□□□ -0.36
GPN3-201ENST00000228827 RNASET2O00584 256 aaKnown RBP12.79□□□□□ -0.36
GPN3-201ENST00000228827 CPSF4O95639 269 aaKnown RBP12.79□□□□□ -0.36
GPN3-201ENST00000228827 NUDT14O95848 222 aa12.79□□□□□ -0.36
GPN3-201ENST00000228827 KITP10721 976 aa12.79□□□□□ -0.36
GPN3-201ENST00000228827 EPXP11678 715 aa12.79□□□□□ -0.36
GPN3-201ENST00000228827 ZNF17P17021 662 aa12.79□□□□□ -0.36
GPN3-201ENST00000228827 DNAJA1P31689 397 aaKnown RBP12.79□□□□□ -0.36
GPN3-201ENST00000228827 MAGOHP61326 146 aaKnown RBP12.79□□□□□ -0.36
GPN3-201ENST00000228827 SORDQ00796 357 aa12.79□□□□□ -0.36
GPN3-201ENST00000228827 NDUFAF6Q330K2 333 aa12.79□□□□□ -0.36
GPN3-201ENST00000228827 KLHL26Q53HC5 615 aa12.79□□□□□ -0.36
GPN3-201ENST00000228827 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.79□□□□□ -0.36
GPN3-201ENST00000228827 BHLHB9Q6PI77 547 aa12.79□□□□□ -0.36
GPN3-201ENST00000228827 OLIG3Q7RTU3 272 aa12.79□□□□□ -0.36
GPN3-201ENST00000228827 KIRREL3Q8IZU9 778 aa12.79□□□□□ -0.36
GPN3-201ENST00000228827 GTPBP8Q8N3Z3 284 aaPredicted RBP12.79□□□□□ -0.36
GPN3-201ENST00000228827 ZNF527Q8NB42 609 aa12.79□□□□□ -0.36
GPN3-201ENST00000228827 ZBTB8AQ96BR9 441 aa12.79□□□□□ -0.36
GPN3-201ENST00000228827 SLC35G5Q96KT7 338 aa12.79□□□□□ -0.36
GPN3-201ENST00000228827 HOXD1Q9GZZ0 328 aa12.79□□□□□ -0.36
GPN3-201ENST00000228827 OPN3Q9H1Y3 402 aaPredicted RBP12.79□□□□□ -0.36
GPN3-201ENST00000228827 MEAF6Q9HAF1 191 aa12.79□□□□□ -0.36
GPN3-201ENST00000228827 HHATLQ9HCP6 504 aa12.79□□□□□ -0.36
GPN3-201ENST00000228827 HAO1Q9UJM8 370 aa12.79□□□□□ -0.36
GPN3-201ENST00000228827 PCDHGB4Q9UN71 923 aa12.79□□□□□ -0.36
GPN3-201ENST00000228827 AKAP9Q99996 3911 aa12.79□□□□□ -0.36
GPN3-201ENST00000228827 FREM3P0C091 2139 aa12.79□□□□□ -0.36
GPN3-201ENST00000228827 GOLGA8QA0A0J9YX86 632 aa12.78□□□□□ -0.36
GPN3-201ENST00000228827 GOLGA8OA6NCC3 632 aa12.78□□□□□ -0.36
GPN3-201ENST00000228827 A8MXE2 369 aa12.78□□□□□ -0.36
GPN3-201ENST00000228827 GOLGA8NF8WBI6 632 aa12.78□□□□□ -0.36
GPN3-201ENST00000228827 GTPBP1O00178 669 aaKnown RBP12.78□□□□□ -0.36
GPN3-201ENST00000228827 ERLIN1O75477 346 aa12.78□□□□□ -0.36
GPN3-201ENST00000228827 AQP8O94778 261 aa12.78□□□□□ -0.36
GPN3-201ENST00000228827 CRHP06850 196 aa12.78□□□□□ -0.36
GPN3-201ENST00000228827 ALDOCP09972 364 aaKnown RBP12.78□□□□□ -0.36
GPN3-201ENST00000228827 KIR2DL2P43627 348 aaPredicted RBP12.78□□□□□ -0.36
GPN3-201ENST00000228827 SLC6A8P48029 635 aa12.78□□□□□ -0.36
GPN3-201ENST00000228827 EEF1A1P68104 462 aaKnown RBP12.78□□□□□ -0.36
GPN3-201ENST00000228827 PHC1P78364 1004 aa12.78□□□□□ -0.36
GPN3-201ENST00000228827 FOXF1Q12946 379 aa12.78□□□□□ -0.36
GPN3-201ENST00000228827 SPANXN4Q5MJ08 99 aa12.78□□□□□ -0.36
GPN3-201ENST00000228827 ARHGAP21Q5T5U3 1957 aa12.78□□□□□ -0.36
GPN3-201ENST00000228827 EEF1A1P5Q5VTE0 462 aa12.78□□□□□ -0.36
GPN3-201ENST00000228827 CBLN3Q6UW01 205 aa12.78□□□□□ -0.36
GPN3-201ENST00000228827 BTLAQ7Z6A9 289 aa12.78□□□□□ -0.36
GPN3-201ENST00000228827 CDC20BQ86Y33 519 aa12.78□□□□□ -0.36
GPN3-201ENST00000228827 WDR75Q8IWA0 830 aaKnown RBP12.78□□□□□ -0.36
GPN3-201ENST00000228827 OR8J2Q8NGG1 315 aa12.78□□□□□ -0.36
GPN3-201ENST00000228827 RFWD2Q8NHY2 731 aa12.78□□□□□ -0.36
GPN3-201ENST00000228827 POC1BQ8TC44 478 aa12.78□□□□□ -0.36
GPN3-201ENST00000228827 ACTRT2Q8TDY3 377 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms