RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 CREBL2O60519 120 aaPredicted RBP12.89□□□□□ -0.35
NFKB1-201ENST00000226574 RFPL3O75679 317 aa12.89□□□□□ -0.35
NFKB1-201ENST00000226574 ZNF888P0CJ79 500 aaPredicted RBP12.89□□□□□ -0.35
NFKB1-201ENST00000226574 TRIM23P36406 574 aa12.89□□□□□ -0.35
NFKB1-201ENST00000226574 KIAA0040Q15053 153 aa12.89□□□□□ -0.35
NFKB1-201ENST00000226574 P2RY14Q15391 338 aa12.89□□□□□ -0.35
NFKB1-201ENST00000226574 LYPD4Q6UWN0 246 aa12.89□□□□□ -0.35
NFKB1-201ENST00000226574 ALKAL2Q6UX46 152 aa12.89□□□□□ -0.35
NFKB1-201ENST00000226574 PRICKLE2Q7Z3G6 844 aa12.89□□□□□ -0.35
NFKB1-201ENST00000226574 SLC39A11Q8N1S5 342 aa12.89□□□□□ -0.35
NFKB1-201ENST00000226574 MFSD4AQ8N468 514 aa12.89□□□□□ -0.35
NFKB1-201ENST00000226574 INO80EQ8NBZ0 244 aaPredicted RBP12.89□□□□□ -0.35
NFKB1-201ENST00000226574 ACOT11Q8WXI4 607 aaPredicted RBP12.89□□□□□ -0.35
NFKB1-201ENST00000226574 HS6ST2Q96MM7 605 aa12.89□□□□□ -0.35
NFKB1-201ENST00000226574 PTCHD1Q96NR3 888 aa12.89□□□□□ -0.35
NFKB1-201ENST00000226574 MTHFD2LQ9H903 347 aaPredicted RBP12.89□□□□□ -0.35
NFKB1-201ENST00000226574 FKBP14Q9NWM8 211 aa12.89□□□□□ -0.35
NFKB1-201ENST00000226574 TAAR2Q9P1P5 351 aa12.89□□□□□ -0.35
NFKB1-201ENST00000226574 TMEM5Q9Y2B1 443 aa12.89□□□□□ -0.35
NFKB1-201ENST00000226574 ATG4BQ9Y4P1 393 aa12.89□□□□□ -0.35
NFKB1-201ENST00000226574 HIDE1A8MVS5 230 aa12.89□□□□□ -0.35
NFKB1-201ENST00000226574 COQ9O75208 318 aa12.89□□□□□ -0.35
NFKB1-201ENST00000226574 CD22P20273 847 aa12.89□□□□□ -0.35
NFKB1-201ENST00000226574 HIST1H1TP22492 207 aaPredicted RBP12.89□□□□□ -0.35
NFKB1-201ENST00000226574 GRK5P34947 590 aa12.89□□□□□ -0.35
NFKB1-201ENST00000226574 TAS2R43P59537 309 aa12.89□□□□□ -0.35
NFKB1-201ENST00000226574 BTN1A1Q13410 526 aa12.89□□□□□ -0.35
NFKB1-201ENST00000226574 PLK5Q496M5 336 aa12.89□□□□□ -0.35
NFKB1-201ENST00000226574 IRAK1BP1Q5VVH5 260 aa12.89□□□□□ -0.35
NFKB1-201ENST00000226574 ZNF767PQ75MW2 155 aa12.89□□□□□ -0.35
NFKB1-201ENST00000226574 TMEM255BQ8WV15 326 aa12.89□□□□□ -0.35
NFKB1-201ENST00000226574 FATE1Q969F0 183 aa12.89□□□□□ -0.35
NFKB1-201ENST00000226574 BPIFA2Q96DR5 249 aa12.89□□□□□ -0.35
NFKB1-201ENST00000226574 ACTRT3Q9BYD9 372 aa12.89□□□□□ -0.35
NFKB1-201ENST00000226574 CD93Q9NPY3 652 aa12.89□□□□□ -0.35
NFKB1-201ENST00000226574 ATP13A2Q9NQ11 1180 aa12.89□□□□□ -0.35
NFKB1-201ENST00000226574 DCDC2BA2VCK2 349 aa12.89□□□□□ -0.35
NFKB1-201ENST00000226574 ICMTO60725 284 aa12.89□□□□□ -0.35
NFKB1-201ENST00000226574 CCL5P13501 91 aa12.89□□□□□ -0.35
NFKB1-201ENST00000226574 OR3A3P47888 321 aa12.89□□□□□ -0.35
NFKB1-201ENST00000226574 OR3A2P47893 321 aa12.89□□□□□ -0.35
NFKB1-201ENST00000226574 DNAJA4Q8WW22 397 aaPredicted RBP12.89□□□□□ -0.35
NFKB1-201ENST00000226574 PEX11GQ96HA9 241 aa12.89□□□□□ -0.35
NFKB1-201ENST00000226574 SLC6A7Q99884 636 aa12.89□□□□□ -0.35
NFKB1-201ENST00000226574 MICU1Q9BPX6 476 aa12.89□□□□□ -0.35
NFKB1-201ENST00000226574 COL16A1Q07092 1604 aaPredicted RBP12.89□□□□□ -0.35
NFKB1-201ENST00000226574 A0A087WUU8 490 aa12.88□□□□□ -0.35
NFKB1-201ENST00000226574 PRICKLE3O43900 615 aaPredicted RBP12.88□□□□□ -0.35
NFKB1-201ENST00000226574 KRT33AO76009 404 aa12.88□□□□□ -0.35
NFKB1-201ENST00000226574 ITGB8P26012 769 aa12.88□□□□□ -0.35
NFKB1-201ENST00000226574 HOXA9P31269 272 aa12.88□□□□□ -0.35
NFKB1-201ENST00000226574 CCKBRP32239 447 aa12.88□□□□□ -0.35
NFKB1-201ENST00000226574 XCR1P46094 333 aa12.88□□□□□ -0.35
NFKB1-201ENST00000226574 ERVK-25P63136 954 aa12.88□□□□□ -0.35
NFKB1-201ENST00000226574 E2F1Q01094 437 aa12.88□□□□□ -0.35
NFKB1-201ENST00000226574 ERV3-1Q14264 604 aa12.88□□□□□ -0.35
NFKB1-201ENST00000226574 PGGHGQ32M88 737 aa12.88□□□□□ -0.35
NFKB1-201ENST00000226574 PYHIN1Q6K0P9 492 aa12.88□□□□□ -0.35
NFKB1-201ENST00000226574 LACC1Q8IV20 430 aa12.88□□□□□ -0.35
NFKB1-201ENST00000226574 OR7G1Q8NGA0 311 aa12.88□□□□□ -0.35
NFKB1-201ENST00000226574 ZDHHC1Q8WTX9 485 aa12.88□□□□□ -0.35
NFKB1-201ENST00000226574 THAP4Q8WY91 577 aa12.88□□□□□ -0.35
NFKB1-201ENST00000226574 OPALINQ96PE5 141 aa12.88□□□□□ -0.35
NFKB1-201ENST00000226574 HOXD1Q9GZZ0 328 aa12.88□□□□□ -0.35
NFKB1-201ENST00000226574 CWH43Q9H720 699 aa12.88□□□□□ -0.35
NFKB1-201ENST00000226574 SLAMF7Q9NQ25 335 aa12.88□□□□□ -0.35
NFKB1-201ENST00000226574 HS3ST2Q9Y278 367 aa12.88□□□□□ -0.35
NFKB1-201ENST00000226574 DOCK3Q8IZD9 2030 aa12.88□□□□□ -0.35
NFKB1-201ENST00000226574 IGFALSP35858 605 aa12.88□□□□□ -0.35
NFKB1-201ENST00000226574 HCCSP53701 268 aa12.88□□□□□ -0.35
NFKB1-201ENST00000226574 PSPHP78330 225 aa12.88□□□□□ -0.35
NFKB1-201ENST00000226574 IRF5Q13568 498 aa12.88□□□□□ -0.35
NFKB1-201ENST00000226574 GRK1Q15835 563 aa12.88□□□□□ -0.35
NFKB1-201ENST00000226574 LEG1Q6P5S2 330 aa12.88□□□□□ -0.35
NFKB1-201ENST00000226574 UBQLNLQ8IYU4 475 aa12.88□□□□□ -0.35
NFKB1-201ENST00000226574 MS4A15Q8N5U1 240 aa12.88□□□□□ -0.35
NFKB1-201ENST00000226574 OR2L3Q8NG85 312 aa12.88□□□□□ -0.35
NFKB1-201ENST00000226574 NEK7Q8TDX7 302 aa12.88□□□□□ -0.35
NFKB1-201ENST00000226574 UBTD2Q8WUN7 234 aa12.88□□□□□ -0.35
NFKB1-201ENST00000226574 GHSRQ92847 366 aa12.88□□□□□ -0.35
NFKB1-201ENST00000226574 TM4SF18Q96CE8 201 aa12.88□□□□□ -0.35
NFKB1-201ENST00000226574 ORAI1Q96D31 301 aa12.88□□□□□ -0.35
NFKB1-201ENST00000226574 DOK1Q99704 481 aa12.88□□□□□ -0.35
NFKB1-201ENST00000226574 CPEB1Q9BZB8 566 aaKnown RBP12.88□□□□□ -0.35
NFKB1-201ENST00000226574 A0A0B4J203 849 aa12.88□□□□□ -0.35
NFKB1-201ENST00000226574 FCMRO60667 390 aa12.88□□□□□ -0.35
NFKB1-201ENST00000226574 RP2O75695 350 aa12.88□□□□□ -0.35
NFKB1-201ENST00000226574 LATS1O95835 1130 aa12.88□□□□□ -0.35
NFKB1-201ENST00000226574 IGLV3-27P01718 113 aa12.88□□□□□ -0.35
NFKB1-201ENST00000226574 KCNJ5P48544 419 aa12.88□□□□□ -0.35
NFKB1-201ENST00000226574 GDI2P50395 445 aaKnown RBP12.88□□□□□ -0.35
NFKB1-201ENST00000226574 ARHGDIBP52566 201 aa12.88□□□□□ -0.35
NFKB1-201ENST00000226574 CCDC36Q8IYA8 594 aa12.88□□□□□ -0.35
NFKB1-201ENST00000226574 GALNT11Q8NCW6 608 aa12.88□□□□□ -0.35
NFKB1-201ENST00000226574 OR52E1Q8NGJ3 308 aa12.88□□□□□ -0.35
NFKB1-201ENST00000226574 LRIG1Q96JA1 1093 aa12.88□□□□□ -0.35
NFKB1-201ENST00000226574 C1GALT1Q9NS00 363 aa12.88□□□□□ -0.35
NFKB1-201ENST00000226574 SLC39A1Q9NY26 324 aa12.88□□□□□ -0.35
NFKB1-201ENST00000226574 PLEKHM1Q9Y4G2 1056 aa12.88□□□□□ -0.35
NFKB1-201ENST00000226574 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms