RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 NT5EP21589 574 aa20.41■□□□□ 0.86
SMARCD2-201ENST00000225742 DRD1P21728 446 aa20.41■□□□□ 0.86
SMARCD2-201ENST00000225742 AZGP1P25311 298 aaKnown RBP20.41■□□□□ 0.86
SMARCD2-201ENST00000225742 HTR2AP28223 471 aa20.41■□□□□ 0.86
SMARCD2-201ENST00000225742 MAPK14Q16539 360 aa20.41■□□□□ 0.86
SMARCD2-201ENST00000225742 CCNJQ5T5M9 372 aa20.41■□□□□ 0.86
SMARCD2-201ENST00000225742 RSBN1Q5VWQ0 802 aaPredicted RBP20.41■□□□□ 0.86
SMARCD2-201ENST00000225742 NIPAL3Q6P499 406 aa20.41■□□□□ 0.86
SMARCD2-201ENST00000225742 ZNF613Q6PF04 617 aa20.41■□□□□ 0.86
SMARCD2-201ENST00000225742 MARCH9Q86YJ5 346 aa20.41■□□□□ 0.86
SMARCD2-201ENST00000225742 SLC43A2Q8N370 569 aa20.41■□□□□ 0.86
SMARCD2-201ENST00000225742 ACBD7Q8N6N7 88 aa20.41■□□□□ 0.86
SMARCD2-201ENST00000225742 BBS1Q8NFJ9 593 aa20.41■□□□□ 0.86
SMARCD2-201ENST00000225742 HOXB13Q92826 284 aaPredicted RBP20.41■□□□□ 0.86
SMARCD2-201ENST00000225742 S1PR5Q9H228 398 aa20.41■□□□□ 0.86
SMARCD2-201ENST00000225742 ZNF221Q9UK13 617 aa20.41■□□□□ 0.86
SMARCD2-201ENST00000225742 ADAM30Q9UKF2 790 aa20.41■□□□□ 0.86
SMARCD2-201ENST00000225742 ATG2BQ96BY7 2078 aa20.41■□□□□ 0.86
SMARCD2-201ENST00000225742 A0A0J9YY10 115 aa20.41■□□□□ 0.86
SMARCD2-201ENST00000225742 FAM86C2PA6NEL3 165 aa20.41■□□□□ 0.86
SMARCD2-201ENST00000225742 GABRPO00591 440 aa20.41■□□□□ 0.86
SMARCD2-201ENST00000225742 BHLHE40O14503 412 aa20.41■□□□□ 0.86
SMARCD2-201ENST00000225742 SOCS6O14544 535 aa20.41■□□□□ 0.86
SMARCD2-201ENST00000225742 FGF17O60258 216 aa20.41■□□□□ 0.86
SMARCD2-201ENST00000225742 PAICSP22234 425 aaKnown RBP20.41■□□□□ 0.86
SMARCD2-201ENST00000225742 CTBP2P56545 445 aa20.41■□□□□ 0.86
SMARCD2-201ENST00000225742 POU6F2P78424 691 aaPredicted RBP20.41■□□□□ 0.86
SMARCD2-201ENST00000225742 BCL2A1Q16548 175 aa20.41■□□□□ 0.86
SMARCD2-201ENST00000225742 PRICKLE4Q2TBC4 344 aa20.41■□□□□ 0.86
SMARCD2-201ENST00000225742 PYDC2Q56P42 97 aa20.41■□□□□ 0.86
SMARCD2-201ENST00000225742 GARNL3Q5VVW2 1013 aa20.41■□□□□ 0.86
SMARCD2-201ENST00000225742 SYT14Q8NB59 555 aa20.41■□□□□ 0.86
SMARCD2-201ENST00000225742 SIMC1Q8NDZ2 872 aa20.41■□□□□ 0.86
SMARCD2-201ENST00000225742 ATP6V1C2Q8NEY4 427 aa20.41■□□□□ 0.86
SMARCD2-201ENST00000225742 NKX2-4Q9H2Z4 354 aa20.41■□□□□ 0.86
SMARCD2-201ENST00000225742 RERGLQ9H628 205 aa20.41■□□□□ 0.86
SMARCD2-201ENST00000225742 MAT2BQ9NZL9 334 aa20.41■□□□□ 0.86
SMARCD2-201ENST00000225742 BAIAP2Q9UQB8 552 aa20.41■□□□□ 0.86
SMARCD2-201ENST00000225742 EPOPA6NHQ4 379 aa20.4■□□□□ 0.86
SMARCD2-201ENST00000225742 OR5K4A6NMS3 321 aa20.4■□□□□ 0.86
SMARCD2-201ENST00000225742 GALR3O60755 368 aaPredicted RBP20.4■□□□□ 0.86
SMARCD2-201ENST00000225742 SLC2A10O95528 541 aa20.4■□□□□ 0.86
SMARCD2-201ENST00000225742 TNFP01375 233 aa20.4■□□□□ 0.86
SMARCD2-201ENST00000225742 HLA-DQB1P01920 261 aa20.4■□□□□ 0.86
SMARCD2-201ENST00000225742 IFI30P13284 250 aa20.4■□□□□ 0.86
SMARCD2-201ENST00000225742 CELP19835 753 aa20.4■□□□□ 0.86
SMARCD2-201ENST00000225742 CAPZA2P47755 286 aa20.4■□□□□ 0.86
SMARCD2-201ENST00000225742 MGAT2Q10469 447 aa20.4■□□□□ 0.86
SMARCD2-201ENST00000225742 RIN1Q13671 783 aa20.4■□□□□ 0.86
SMARCD2-201ENST00000225742 ZNF791Q3KP31 576 aaPredicted RBP20.4■□□□□ 0.86
SMARCD2-201ENST00000225742 KIAA1324Q6UXG2 1013 aaKnown RBP20.4■□□□□ 0.86
SMARCD2-201ENST00000225742 CA13Q8N1Q1 262 aa20.4■□□□□ 0.86
SMARCD2-201ENST00000225742 CAMKK1Q8N5S9 505 aa20.4■□□□□ 0.86
SMARCD2-201ENST00000225742 ZFP41Q8N8Y5 198 aa20.4■□□□□ 0.86
SMARCD2-201ENST00000225742 ACOT12Q8WYK0 555 aa20.4■□□□□ 0.86
SMARCD2-201ENST00000225742 FAM3CQ92520 227 aa20.4■□□□□ 0.86
SMARCD2-201ENST00000225742 NEDD4LQ96PU5 975 aa20.4■□□□□ 0.86
SMARCD2-201ENST00000225742 DPH1Q9BZG8 443 aa20.4■□□□□ 0.86
SMARCD2-201ENST00000225742 POU2F3Q9UKI9 436 aa20.4■□□□□ 0.86
SMARCD2-201ENST00000225742 GOLGA4Q13439 2230 aaKnown RBP20.4■□□□□ 0.86
SMARCD2-201ENST00000225742 CENPVL1A0A0U1RR11 272 aa20.39■□□□□ 0.86
SMARCD2-201ENST00000225742 BRINP1O60477 761 aa20.39■□□□□ 0.86
SMARCD2-201ENST00000225742 PRG2P13727 222 aa20.39■□□□□ 0.86
SMARCD2-201ENST00000225742 MAKP20794 623 aa20.39■□□□□ 0.86
SMARCD2-201ENST00000225742 ACSL1P33121 698 aa20.39■□□□□ 0.86
SMARCD2-201ENST00000225742 SHHQ15465 462 aa20.39■□□□□ 0.86
SMARCD2-201ENST00000225742 TCEA2Q15560 299 aa20.39■□□□□ 0.86
SMARCD2-201ENST00000225742 AMZ1Q400G9 498 aa20.39■□□□□ 0.86
SMARCD2-201ENST00000225742 SLC35F1Q5T1Q4 408 aa20.39■□□□□ 0.86
SMARCD2-201ENST00000225742 LCN1P1Q5VSP4 162 aa20.39■□□□□ 0.86
SMARCD2-201ENST00000225742 RDH10Q8IZV5 341 aa20.39■□□□□ 0.86
SMARCD2-201ENST00000225742 OR6F1Q8NGZ6 308 aa20.39■□□□□ 0.86
SMARCD2-201ENST00000225742 NEIL3Q8TAT5 605 aa20.39■□□□□ 0.86
SMARCD2-201ENST00000225742 GPBAR1Q8TDU6 330 aa20.39■□□□□ 0.86
SMARCD2-201ENST00000225742 CTHRC1Q96CG8 243 aa20.39■□□□□ 0.86
SMARCD2-201ENST00000225742 ATF6BQ99941 703 aa20.39■□□□□ 0.86
SMARCD2-201ENST00000225742 TMED9Q9BVK6 235 aa20.39■□□□□ 0.86
SMARCD2-201ENST00000225742 KCNN2Q9H2S1 579 aa20.39■□□□□ 0.86
SMARCD2-201ENST00000225742 TBC1D17Q9HA65 648 aa20.39■□□□□ 0.86
SMARCD2-201ENST00000225742 TMEM27Q9HBJ8 222 aa20.39■□□□□ 0.86
SMARCD2-201ENST00000225742 BABAM2Q9NXR7 383 aa20.39■□□□□ 0.86
SMARCD2-201ENST00000225742 MED31Q9Y3C7 131 aa20.39■□□□□ 0.86
SMARCD2-201ENST00000225742 LRP4O75096 1905 aa20.39■□□□□ 0.86
SMARCD2-201ENST00000225742 CCDC182A6NF36 153 aa20.39■□□□□ 0.85
SMARCD2-201ENST00000225742 HMX3A6NHT5 357 aa20.39■□□□□ 0.85
SMARCD2-201ENST00000225742 COQ9O75208 318 aa20.39■□□□□ 0.85
SMARCD2-201ENST00000225742 RGS9O75916 674 aaPredicted RBP20.39■□□□□ 0.85
SMARCD2-201ENST00000225742 NKX2-2O95096 273 aa20.39■□□□□ 0.85
SMARCD2-201ENST00000225742 TBXA2RP21731 343 aa20.39■□□□□ 0.85
SMARCD2-201ENST00000225742 DDOSTP39656 456 aa20.39■□□□□ 0.85
SMARCD2-201ENST00000225742 RAB38P57729 211 aa20.39■□□□□ 0.85
SMARCD2-201ENST00000225742 UBE2IP63279 158 aaKnown RBP20.39■□□□□ 0.85
SMARCD2-201ENST00000225742 ID2Q02363 134 aa20.39■□□□□ 0.85
SMARCD2-201ENST00000225742 HTR4Q13639 388 aa20.39■□□□□ 0.85
SMARCD2-201ENST00000225742 TRAM1Q15629 374 aa20.39■□□□□ 0.85
SMARCD2-201ENST00000225742 ZSWIM7Q19AV6 140 aa20.39■□□□□ 0.85
SMARCD2-201ENST00000225742 PLBD1Q6P4A8 553 aa20.39■□□□□ 0.85
SMARCD2-201ENST00000225742 SIRT6Q8N6T7 355 aa20.39■□□□□ 0.85
SMARCD2-201ENST00000225742 ZNF486Q96H40 463 aaPredicted RBP20.39■□□□□ 0.85
SMARCD2-201ENST00000225742 DEPDC7Q96QD5 511 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms