RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 TROVE2P10155 538 aaKnown RBP eCLIP11.49□□□□□ -0.57
LSM5-201ENST00000223084 CAPN3P20807 821 aa11.49□□□□□ -0.57
LSM5-201ENST00000223084 MDH1P40925 334 aaKnown RBP11.49□□□□□ -0.57
LSM5-201ENST00000223084 SMSP52788 366 aa11.49□□□□□ -0.57
LSM5-201ENST00000223084 MVDP53602 400 aa11.49□□□□□ -0.57
LSM5-201ENST00000223084 GFRA1P56159 465 aa11.49□□□□□ -0.57
LSM5-201ENST00000223084 B3GALT5-AS1P59052 145 aa11.49□□□□□ -0.57
LSM5-201ENST00000223084 SRYQ05066 204 aa11.49□□□□□ -0.57
LSM5-201ENST00000223084 RCAN2Q14206 197 aa11.49□□□□□ -0.57
LSM5-201ENST00000223084 SYPL1Q16563 259 aa11.49□□□□□ -0.57
LSM5-201ENST00000223084 PDZK1Q5T2W1 519 aa11.49□□□□□ -0.57
LSM5-201ENST00000223084 ATAD3BQ5T9A4 648 aa11.49□□□□□ -0.57
LSM5-201ENST00000223084 RAET1LQ5VY80 246 aa11.49□□□□□ -0.57
LSM5-201ENST00000223084 TMEM211Q6ICI0 200 aa11.49□□□□□ -0.57
LSM5-201ENST00000223084 RPTNQ6XPR3 784 aa11.49□□□□□ -0.57
LSM5-201ENST00000223084 B3GNT6Q6ZMB0 384 aa11.49□□□□□ -0.57
LSM5-201ENST00000223084 MAMDC2Q7Z304 686 aaPredicted RBP11.49□□□□□ -0.57
LSM5-201ENST00000223084 CCDC71Q8IV32 467 aaPredicted RBP11.49□□□□□ -0.57
LSM5-201ENST00000223084 ANKFN1Q8N957 763 aa11.49□□□□□ -0.57
LSM5-201ENST00000223084 PHOSPHO1Q8TCT1 267 aa11.49□□□□□ -0.57
LSM5-201ENST00000223084 STON2Q8WXE9 905 aa11.49□□□□□ -0.57
LSM5-201ENST00000223084 ROPN1LQ96C74 230 aa11.49□□□□□ -0.57
LSM5-201ENST00000223084 SPDL1Q96EA4 605 aa11.49□□□□□ -0.57
LSM5-201ENST00000223084 NPAS1Q99742 590 aa11.49□□□□□ -0.57
LSM5-201ENST00000223084 TTYH2Q9BSA4 534 aa11.49□□□□□ -0.57
LSM5-201ENST00000223084 ZNF350Q9GZX5 532 aa11.49□□□□□ -0.57
LSM5-201ENST00000223084 HOXD1Q9GZZ0 328 aa11.49□□□□□ -0.57
LSM5-201ENST00000223084 PAIP1Q9H074 479 aaKnown RBP11.49□□□□□ -0.57
LSM5-201ENST00000223084 CCDC134Q9H6E4 229 aa11.49□□□□□ -0.57
LSM5-201ENST00000223084 PTGES2Q9H7Z7 377 aa11.49□□□□□ -0.57
LSM5-201ENST00000223084 TPT1P8Q9HAU6 139 aa11.49□□□□□ -0.57
LSM5-201ENST00000223084 VDAC3Q9Y277 283 aa11.49□□□□□ -0.57
LSM5-201ENST00000223084 MRPS18CQ9Y3D5 142 aaKnown RBP11.49□□□□□ -0.57
LSM5-201ENST00000223084 PCDHB14Q9Y5E9 798 aa11.49□□□□□ -0.57
LSM5-201ENST00000223084 AHRRA9YTQ3 701 aa11.48□□□□□ -0.57
LSM5-201ENST00000223084 HCRTR2O43614 444 aa11.48□□□□□ -0.57
LSM5-201ENST00000223084 KRT75O95678 551 aa11.48□□□□□ -0.57
LSM5-201ENST00000223084 AGR2O95994 175 aa11.48□□□□□ -0.57
LSM5-201ENST00000223084 ACTL6AO96019 429 aa11.48□□□□□ -0.57
LSM5-201ENST00000223084 ZCCHC18P0CG32 403 aa11.48□□□□□ -0.57
LSM5-201ENST00000223084 GABRA1P14867 456 aa11.48□□□□□ -0.57
LSM5-201ENST00000223084 GCKP35557 465 aa11.48□□□□□ -0.57
LSM5-201ENST00000223084 CRATP43155 626 aa11.48□□□□□ -0.57
LSM5-201ENST00000223084 LHX2P50458 406 aa11.48□□□□□ -0.57
LSM5-201ENST00000223084 ZNF117Q03924 483 aa11.48□□□□□ -0.57
LSM5-201ENST00000223084 GANABQ14697 944 aaKnown RBP11.48□□□□□ -0.57
LSM5-201ENST00000223084 ACSF3Q4G176 576 aaPredicted RBP11.48□□□□□ -0.57
LSM5-201ENST00000223084 GPAT3Q53EU6 434 aa11.48□□□□□ -0.57
LSM5-201ENST00000223084 PAGE3Q5JUK9 113 aa11.48□□□□□ -0.57
LSM5-201ENST00000223084 TYW3Q6IPR3 259 aaKnown RBP11.48□□□□□ -0.57
LSM5-201ENST00000223084 CBLN3Q6UW01 205 aa11.48□□□□□ -0.57
LSM5-201ENST00000223084 PLXDC2Q6UX71 529 aa11.48□□□□□ -0.57
LSM5-201ENST00000223084 FRRS1Q6ZNA5 592 aa11.48□□□□□ -0.57
LSM5-201ENST00000223084 SEM1Q6ZVN7 128 aa11.48□□□□□ -0.57
LSM5-201ENST00000223084 PM20D2Q8IYS1 436 aa11.48□□□□□ -0.57
LSM5-201ENST00000223084 ZNF527Q8NB42 609 aa11.48□□□□□ -0.57
LSM5-201ENST00000223084 OR10Q1Q8NGQ4 319 aa11.48□□□□□ -0.57
LSM5-201ENST00000223084 B4GALNT2Q8NHY0 566 aa11.48□□□□□ -0.57
LSM5-201ENST00000223084 RND1Q92730 232 aa11.48□□□□□ -0.57
LSM5-201ENST00000223084 SDCCAG3Q96C92 435 aa11.48□□□□□ -0.57
LSM5-201ENST00000223084 ZG16BQ96DA0 208 aa11.48□□□□□ -0.57
LSM5-201ENST00000223084 ARSGQ96EG1 525 aa11.48□□□□□ -0.57
LSM5-201ENST00000223084 DTNBP1Q96EV8 351 aa11.48□□□□□ -0.57
LSM5-201ENST00000223084 SIKE1Q9BRV8 207 aa11.48□□□□□ -0.57
LSM5-201ENST00000223084 NMUR2Q9GZQ4 415 aa11.48□□□□□ -0.57
LSM5-201ENST00000223084 PRDM14Q9GZV8 571 aa11.48□□□□□ -0.57
LSM5-201ENST00000223084 SLC25A37Q9NYZ2 338 aa11.48□□□□□ -0.57
LSM5-201ENST00000223084 SLAMF8Q9P0V8 285 aa11.48□□□□□ -0.57
LSM5-201ENST00000223084 TRIM33Q9UPN9 1127 aa11.48□□□□□ -0.57
LSM5-201ENST00000223084 RNF6Q9Y252 685 aa11.48□□□□□ -0.57
LSM5-201ENST00000223084 CARD8Q9Y2G2 431 aa11.48□□□□□ -0.57
LSM5-201ENST00000223084 WDR45Q9Y484 360 aa11.48□□□□□ -0.57
LSM5-201ENST00000223084 DTNAQ9Y4J8 743 aa11.48□□□□□ -0.57
LSM5-201ENST00000223084 A0A096LPI6 279 aa11.47□□□□□ -0.57
LSM5-201ENST00000223084 OR2M5A3KFT3 312 aa11.47□□□□□ -0.57
LSM5-201ENST00000223084 GTPBP1O00178 669 aaKnown RBP11.47□□□□□ -0.57
LSM5-201ENST00000223084 KIAA0513O60268 411 aa11.47□□□□□ -0.57
LSM5-201ENST00000223084 UGT2B17O75795 530 aa11.47□□□□□ -0.57
LSM5-201ENST00000223084 H6PDO95479 791 aa11.47□□□□□ -0.57
LSM5-201ENST00000223084 CHRM4P08173 479 aa11.47□□□□□ -0.57
LSM5-201ENST00000223084 GP1BBP13224 206 aa11.47□□□□□ -0.57
LSM5-201ENST00000223084 ETFAP13804 333 aa11.47□□□□□ -0.57
LSM5-201ENST00000223084 HOXB9P17482 250 aaPredicted RBP11.47□□□□□ -0.57
LSM5-201ENST00000223084 CHMP24386 653 aa11.47□□□□□ -0.57
LSM5-201ENST00000223084 GRNP28799 593 aaKnown RBP11.47□□□□□ -0.57
LSM5-201ENST00000223084 ADH7P40394 386 aa11.47□□□□□ -0.57
LSM5-201ENST00000223084 ARFIP2P53365 341 aa11.47□□□□□ -0.57
LSM5-201ENST00000223084 CHRNEQ04844 493 aa11.47□□□□□ -0.57
LSM5-201ENST00000223084 ZNF141Q15928 474 aa11.47□□□□□ -0.57
LSM5-201ENST00000223084 MAPK14Q16539 360 aa11.47□□□□□ -0.57
LSM5-201ENST00000223084 AAGABQ6PD74 315 aa11.47□□□□□ -0.57
LSM5-201ENST00000223084 XKRXQ6PP77 449 aa11.47□□□□□ -0.57
LSM5-201ENST00000223084 ENPP6Q6UWR7 440 aa11.47□□□□□ -0.57
LSM5-201ENST00000223084 MTERF4Q7Z6M4 381 aaKnown RBP11.47□□□□□ -0.57
LSM5-201ENST00000223084 MISPQ8IVT2 679 aa11.47□□□□□ -0.57
LSM5-201ENST00000223084 MSRB3Q8IXL7 192 aa11.47□□□□□ -0.57
LSM5-201ENST00000223084 ZNF317Q96PQ6 595 aaPredicted RBP11.47□□□□□ -0.57
LSM5-201ENST00000223084 TRIB1Q96RU8 372 aa11.47□□□□□ -0.57
LSM5-201ENST00000223084 TUBA1CQ9BQE3 449 aa11.47□□□□□ -0.57
LSM5-201ENST00000223084 QRSL1Q9H0R6 528 aaKnown RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms