RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 RNF121Q9H920 327 aa13.95□□□□□ -0.18
UBE2D4-201ENST00000222402 TCRBV21S2A2A0A5A6 115 aa13.95□□□□□ -0.18
UBE2D4-201ENST00000222402 TMEM129A0AVI4 362 aa13.95□□□□□ -0.18
UBE2D4-201ENST00000222402 CPNE3O75131 537 aaKnown RBP13.95□□□□□ -0.18
UBE2D4-201ENST00000222402 RGS9O75916 674 aaPredicted RBP13.95□□□□□ -0.18
UBE2D4-201ENST00000222402 HLA-DQA2P01906 255 aa13.95□□□□□ -0.18
UBE2D4-201ENST00000222402 ITPKBP27987 946 aa13.95□□□□□ -0.18
UBE2D4-201ENST00000222402 LIMS1P48059 325 aa13.95□□□□□ -0.18
UBE2D4-201ENST00000222402 FGL2Q14314 439 aa13.95□□□□□ -0.18
UBE2D4-201ENST00000222402 DECR1Q16698 335 aa13.95□□□□□ -0.18
UBE2D4-201ENST00000222402 HLA-DQA1Q5Y7H0 255 aa13.95□□□□□ -0.18
UBE2D4-201ENST00000222402 ATCAYQ86WG3 371 aa13.95□□□□□ -0.18
UBE2D4-201ENST00000222402 OR4K13Q8NH42 304 aa13.95□□□□□ -0.18
UBE2D4-201ENST00000222402 ZNF563Q8TA94 476 aa13.95□□□□□ -0.18
UBE2D4-201ENST00000222402 PATE1Q8WXA2 126 aa13.95□□□□□ -0.18
UBE2D4-201ENST00000222402 GPA33Q99795 319 aa13.95□□□□□ -0.18
UBE2D4-201ENST00000222402 COQ7Q99807 217 aa13.95□□□□□ -0.18
UBE2D4-201ENST00000222402 KIR3DX1Q9H7L2 352 aa13.95□□□□□ -0.18
UBE2D4-201ENST00000222402 HINT3Q9NQE9 182 aaKnown RBP13.95□□□□□ -0.18
UBE2D4-201ENST00000222402 SIDT1Q9NXL6 827 aaKnown RBP13.95□□□□□ -0.18
UBE2D4-201ENST00000222402 IKZF2Q9UKS7 526 aa13.95□□□□□ -0.18
UBE2D4-201ENST00000222402 PCDHGB2Q9Y5G2 931 aa13.95□□□□□ -0.18
UBE2D4-201ENST00000222402 ZC3H12DA2A288 527 aaKnown RBP13.94□□□□□ -0.18
UBE2D4-201ENST00000222402 CPEP16870 476 aa13.94□□□□□ -0.18
UBE2D4-201ENST00000222402 GBX2P52951 348 aaPredicted RBP13.94□□□□□ -0.18
UBE2D4-201ENST00000222402 TP53I13Q8NBR0 393 aaPredicted RBP13.94□□□□□ -0.18
UBE2D4-201ENST00000222402 RPP25Q9BUL9 199 aaKnown RBP13.94□□□□□ -0.18
UBE2D4-201ENST00000222402 PLA2G2FQ9BZM2 168 aa13.94□□□□□ -0.18
UBE2D4-201ENST00000222402 C11orf54Q9H0W9 315 aaPredicted RBP13.94□□□□□ -0.18
UBE2D4-201ENST00000222402 MED28Q9H204 178 aa13.94□□□□□ -0.18
UBE2D4-201ENST00000222402 Q9N2J8 555 aa13.94□□□□□ -0.18
UBE2D4-201ENST00000222402 OBP2AQ9NY56 170 aa13.94□□□□□ -0.18
UBE2D4-201ENST00000222402 PRAMEF27A3QJZ7 478 aa13.94□□□□□ -0.18
UBE2D4-201ENST00000222402 A8MUA0 341 aa13.94□□□□□ -0.18
UBE2D4-201ENST00000222402 INMT-MINDY4F8WBC2 141 aa13.94□□□□□ -0.18
UBE2D4-201ENST00000222402 FABP5Q01469 135 aa13.94□□□□□ -0.18
UBE2D4-201ENST00000222402 DUSP2Q05923 314 aa13.94□□□□□ -0.18
UBE2D4-201ENST00000222402 ENPP2Q13822 863 aa13.94□□□□□ -0.18
UBE2D4-201ENST00000222402 GPR18Q14330 331 aa13.94□□□□□ -0.18
UBE2D4-201ENST00000222402 ZNF836Q6ZNA1 936 aa13.94□□□□□ -0.18
UBE2D4-201ENST00000222402 Q6ZSR6 202 aa13.94□□□□□ -0.18
UBE2D4-201ENST00000222402 FAM220AQ7Z4H9 259 aa13.94□□□□□ -0.18
UBE2D4-201ENST00000222402 PRSS58Q8IYP2 241 aa13.94□□□□□ -0.18
UBE2D4-201ENST00000222402 OR5T3Q8NGG3 340 aa13.94□□□□□ -0.18
UBE2D4-201ENST00000222402 OR52E2Q8NGJ4 325 aa13.94□□□□□ -0.18
UBE2D4-201ENST00000222402 FGF14Q92915 247 aa13.94□□□□□ -0.18
UBE2D4-201ENST00000222402 MYADMQ96S97 322 aa13.94□□□□□ -0.18
UBE2D4-201ENST00000222402 OR2B2Q9GZK3 357 aa13.94□□□□□ -0.18
UBE2D4-201ENST00000222402 NKX2-4Q9H2Z4 354 aa13.94□□□□□ -0.18
UBE2D4-201ENST00000222402 BRD7Q9NPI1 651 aa13.94□□□□□ -0.18
UBE2D4-201ENST00000222402 GNG8Q9UK08 70 aa13.94□□□□□ -0.18
UBE2D4-201ENST00000222402 HIST1H2ABP04908 130 aa13.94□□□□□ -0.18
UBE2D4-201ENST00000222402 FUT1P19526 365 aa13.94□□□□□ -0.18
UBE2D4-201ENST00000222402 TRHRP34981 398 aaPredicted RBP13.94□□□□□ -0.18
UBE2D4-201ENST00000222402 BIKQ13323 160 aa13.94□□□□□ -0.18
UBE2D4-201ENST00000222402 PON3Q15166 354 aa13.94□□□□□ -0.18
UBE2D4-201ENST00000222402 SF3B4Q15427 424 aaKnown RBP eCLIP13.94□□□□□ -0.18
UBE2D4-201ENST00000222402 TMEM201Q5SNT2 666 aa13.94□□□□□ -0.18
UBE2D4-201ENST00000222402 SNAP47Q5SQN1 464 aa13.94□□□□□ -0.18
UBE2D4-201ENST00000222402 ANKRD54Q6NXT1 300 aa13.94□□□□□ -0.18
UBE2D4-201ENST00000222402 IL20RBQ6UXL0 311 aa13.94□□□□□ -0.18
UBE2D4-201ENST00000222402 HIST3H2AQ7L7L0 130 aa13.94□□□□□ -0.18
UBE2D4-201ENST00000222402 HIST1H2ACQ93077 130 aa13.94□□□□□ -0.18
UBE2D4-201ENST00000222402 DGAT2Q96PD7 388 aa13.94□□□□□ -0.18
UBE2D4-201ENST00000222402 KATNB1Q9BVA0 655 aa13.94□□□□□ -0.18
UBE2D4-201ENST00000222402 SLITRK2Q9H156 845 aa13.94□□□□□ -0.18
UBE2D4-201ENST00000222402 BOLA1Q9Y3E2 137 aa13.94□□□□□ -0.18
UBE2D4-201ENST00000222402 PIAS3Q9Y6X2 628 aa13.94□□□□□ -0.18
UBE2D4-201ENST00000222402 TRAV6A0A075B6T7 132 aa13.93□□□□□ -0.18
UBE2D4-201ENST00000222402 IGKV1-8A0A0C4DH67 115 aa13.93□□□□□ -0.18
UBE2D4-201ENST00000222402 PEX12O00623 359 aa13.93□□□□□ -0.18
UBE2D4-201ENST00000222402 EEF1E1O43324 174 aaKnown RBP13.93□□□□□ -0.18
UBE2D4-201ENST00000222402 EDNRAP25101 427 aa13.93□□□□□ -0.18
UBE2D4-201ENST00000222402 RCVRNP35243 200 aa13.93□□□□□ -0.18
UBE2D4-201ENST00000222402 TSFMP43897 325 aaKnown RBP13.93□□□□□ -0.18
UBE2D4-201ENST00000222402 DUSP6Q16828 381 aa13.93□□□□□ -0.18
UBE2D4-201ENST00000222402 ATAD3CQ5T2N8 411 aa13.93□□□□□ -0.18
UBE2D4-201ENST00000222402 NANOGNBQ7Z5D8 188 aa13.93□□□□□ -0.18
UBE2D4-201ENST00000222402 ASCC1Q8N9N2 400 aaKnown RBP13.93□□□□□ -0.18
UBE2D4-201ENST00000222402 TOR1AIP2Q8NFQ8 470 aa13.93□□□□□ -0.18
UBE2D4-201ENST00000222402 NLGN4YQ8NFZ3 816 aaPredicted RBP13.93□□□□□ -0.18
UBE2D4-201ENST00000222402 PEX11GQ96HA9 241 aa13.93□□□□□ -0.18
UBE2D4-201ENST00000222402 SIGLEC11Q96RL6 698 aa13.93□□□□□ -0.18
UBE2D4-201ENST00000222402 GAL3ST4Q96RP7 486 aa13.93□□□□□ -0.18
UBE2D4-201ENST00000222402 SDF2Q99470 211 aa13.93□□□□□ -0.18
UBE2D4-201ENST00000222402 BABAM2Q9NXR7 383 aa13.93□□□□□ -0.18
UBE2D4-201ENST00000222402 SLC17A4Q9Y2C5 497 aa13.93□□□□□ -0.18
UBE2D4-201ENST00000222402 SPTBP11277 2137 aa13.93□□□□□ -0.18
UBE2D4-201ENST00000222402 IQCMA0A1B0GVH7 501 aa13.93□□□□□ -0.18
UBE2D4-201ENST00000222402 A0A1B0GVT2 93 aa13.93□□□□□ -0.18
UBE2D4-201ENST00000222402 BLOC1S5-TXNDC5H3BN57 136 aa13.93□□□□□ -0.18
UBE2D4-201ENST00000222402 LYRM1O43325 122 aa13.93□□□□□ -0.18
UBE2D4-201ENST00000222402 SSNA1O43805 119 aa13.93□□□□□ -0.18
UBE2D4-201ENST00000222402 GPR75O95800 540 aa13.93□□□□□ -0.18
UBE2D4-201ENST00000222402 ZNF620Q6ZNG0 422 aa13.93□□□□□ -0.18
UBE2D4-201ENST00000222402 JAZF1Q86VZ6 243 aa13.93□□□□□ -0.18
UBE2D4-201ENST00000222402 SLC37A3Q8NCC5 494 aa13.93□□□□□ -0.18
UBE2D4-201ENST00000222402 OR8D4Q8NGM9 314 aa13.93□□□□□ -0.18
UBE2D4-201ENST00000222402 ZMYND19Q96E35 227 aaPredicted RBP13.93□□□□□ -0.18
UBE2D4-201ENST00000222402 AHCYL2Q96HN2 611 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms