RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 CPNE3O75131 537 aaKnown RBP12.38□□□□□ -0.43
SRP54-201ENST00000216774 ADH1BP00325 375 aa12.38□□□□□ -0.43
SRP54-201ENST00000216774 CHRNB1P11230 501 aa12.38□□□□□ -0.43
SRP54-201ENST00000216774 C5AR1P21730 350 aa12.38□□□□□ -0.43
SRP54-201ENST00000216774 RPS15AP62244 130 aaKnown RBP12.38□□□□□ -0.43
SRP54-201ENST00000216774 TNFRSF17Q02223 184 aa12.38□□□□□ -0.43
SRP54-201ENST00000216774 RGS1Q08116 209 aa12.38□□□□□ -0.43
SRP54-201ENST00000216774 PAQR7Q86WK9 346 aa12.38□□□□□ -0.43
SRP54-201ENST00000216774 CACUL1Q86Y37 369 aa12.38□□□□□ -0.43
SRP54-201ENST00000216774 GPALPP1Q8IXQ4 340 aa12.38□□□□□ -0.43
SRP54-201ENST00000216774 HS6ST2Q96MM7 605 aa12.38□□□□□ -0.43
SRP54-201ENST00000216774 CD180Q99467 661 aa12.38□□□□□ -0.43
SRP54-201ENST00000216774 PRSS27Q9BQR3 290 aa12.38□□□□□ -0.43
SRP54-201ENST00000216774 WACQ9BTA9 647 aa12.38□□□□□ -0.43
SRP54-201ENST00000216774 HDHD2Q9H0R4 259 aa12.38□□□□□ -0.43
SRP54-201ENST00000216774 SIDT1Q9NXL6 827 aaKnown RBP12.38□□□□□ -0.43
SRP54-201ENST00000216774 OR6C2Q9NZP2 312 aa12.38□□□□□ -0.43
SRP54-201ENST00000216774 ZFR2Q9UPR6 939 aaKnown RBP12.38□□□□□ -0.43
SRP54-201ENST00000216774 PLEKHM1Q9Y4G2 1056 aa12.38□□□□□ -0.43
SRP54-201ENST00000216774 SIRT4Q9Y6E7 314 aaPredicted RBP12.38□□□□□ -0.43
SRP54-201ENST00000216774 DAPL1A0PJW8 107 aa12.37□□□□□ -0.43
SRP54-201ENST00000216774 SLC22A31A6NKX4 558 aa12.37□□□□□ -0.43
SRP54-201ENST00000216774 MT-ND5P03915 603 aa12.37□□□□□ -0.43
SRP54-201ENST00000216774 HK1P19367 917 aa12.37□□□□□ -0.43
SRP54-201ENST00000216774 CAPZA2P47755 286 aa12.37□□□□□ -0.43
SRP54-201ENST00000216774 FXYD6P3P58550 94 aa12.37□□□□□ -0.43
SRP54-201ENST00000216774 TAS2R43P59537 309 aa12.37□□□□□ -0.43
SRP54-201ENST00000216774 HACD4Q5VWC8 232 aa12.37□□□□□ -0.43
SRP54-201ENST00000216774 CREB3L2Q70SY1 520 aa12.37□□□□□ -0.43
SRP54-201ENST00000216774 VN1R4Q7Z5H5 301 aa12.37□□□□□ -0.43
SRP54-201ENST00000216774 OAFQ86UD1 273 aa12.37□□□□□ -0.43
SRP54-201ENST00000216774 TMEM99Q8N816 258 aa12.37□□□□□ -0.43
SRP54-201ENST00000216774 OR5W2Q8NH69 310 aa12.37□□□□□ -0.43
SRP54-201ENST00000216774 NT5CQ8TCD5 201 aa12.37□□□□□ -0.43
SRP54-201ENST00000216774 KISS1RQ969F8 398 aaPredicted RBP12.37□□□□□ -0.43
SRP54-201ENST00000216774 RFT1Q96AA3 541 aa12.37□□□□□ -0.43
SRP54-201ENST00000216774 SLC28A3Q9HAS3 691 aa12.37□□□□□ -0.43
SRP54-201ENST00000216774 PRDM9Q9NQV7 894 aa12.37□□□□□ -0.43
SRP54-201ENST00000216774 SERGEFQ9UGK8 458 aa12.37□□□□□ -0.43
SRP54-201ENST00000216774 KLF15Q9UIH9 416 aa12.37□□□□□ -0.43
SRP54-201ENST00000216774 COLEC10Q9Y6Z7 277 aa12.37□□□□□ -0.43
SRP54-201ENST00000216774 FAM86C2PA6NEL3 165 aa12.37□□□□□ -0.43
SRP54-201ENST00000216774 DVL2O14641 736 aa12.37□□□□□ -0.43
SRP54-201ENST00000216774 HRO43593 1189 aa12.37□□□□□ -0.43
SRP54-201ENST00000216774 PLPP2O43688 288 aa12.37□□□□□ -0.43
SRP54-201ENST00000216774 RCBTB2O95199 551 aa12.37□□□□□ -0.43
SRP54-201ENST00000216774 KAT7O95251 611 aa12.37□□□□□ -0.43
SRP54-201ENST00000216774 ZNF888P0CJ79 500 aaPredicted RBP12.37□□□□□ -0.43
SRP54-201ENST00000216774 BMP7P18075 431 aa12.37□□□□□ -0.43
SRP54-201ENST00000216774 TBXA2RP21731 343 aa12.37□□□□□ -0.43
SRP54-201ENST00000216774 RPS4Y1P22090 263 aaKnown RBP12.37□□□□□ -0.43
SRP54-201ENST00000216774 ACSL1P33121 698 aa12.37□□□□□ -0.43
SRP54-201ENST00000216774 PITPNBP48739 271 aa12.37□□□□□ -0.43
SRP54-201ENST00000216774 RPS21P63220 83 aaKnown RBP12.37□□□□□ -0.43
SRP54-201ENST00000216774 SGCGQ13326 291 aa12.37□□□□□ -0.43
SRP54-201ENST00000216774 GPR176Q14439 515 aa12.37□□□□□ -0.43
SRP54-201ENST00000216774 DUSP5Q16690 384 aa12.37□□□□□ -0.43
SRP54-201ENST00000216774 PLA1AQ53H76 456 aa12.37□□□□□ -0.43
SRP54-201ENST00000216774 KCT2Q8NC54 265 aa12.37□□□□□ -0.43
SRP54-201ENST00000216774 OR4K14Q8NGD5 310 aa12.37□□□□□ -0.43
SRP54-201ENST00000216774 DEDD2Q8WXF8 326 aa12.37□□□□□ -0.43
SRP54-201ENST00000216774 SDF2Q99470 211 aa12.37□□□□□ -0.43
SRP54-201ENST00000216774 THAP7Q9BT49 309 aaPredicted RBP12.37□□□□□ -0.43
SRP54-201ENST00000216774 NDC1Q9BTX1 674 aa12.37□□□□□ -0.43
SRP54-201ENST00000216774 DPH1Q9BZG8 443 aa12.37□□□□□ -0.43
SRP54-201ENST00000216774 ZNF350Q9GZX5 532 aa12.37□□□□□ -0.43
SRP54-201ENST00000216774 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.37□□□□□ -0.43
SRP54-201ENST00000216774 CMC2Q9NRP2 79 aa12.37□□□□□ -0.43
SRP54-201ENST00000216774 OBP2AQ9NY56 170 aa12.37□□□□□ -0.43
SRP54-201ENST00000216774 CXXC1Q9P0U4 656 aaPredicted RBP12.37□□□□□ -0.43
SRP54-201ENST00000216774 RWDD3Q9Y3V2 267 aa12.37□□□□□ -0.43
SRP54-201ENST00000216774 GPSM3Q9Y4H4 160 aa12.37□□□□□ -0.43
SRP54-201ENST00000216774 STON1Q9Y6Q2 735 aa12.37□□□□□ -0.43
SRP54-201ENST00000216774 AGRPO00253 132 aa12.36□□□□□ -0.43
SRP54-201ENST00000216774 PLOD3O60568 738 aa12.36□□□□□ -0.43
SRP54-201ENST00000216774 FMO6PO60774 539 aa12.36□□□□□ -0.43
SRP54-201ENST00000216774 DBIP07108 87 aaKnown RBP12.36□□□□□ -0.43
SRP54-201ENST00000216774 NPR2P20594 1047 aa12.36□□□□□ -0.43
SRP54-201ENST00000216774 THBS2P35442 1172 aa12.36□□□□□ -0.43
SRP54-201ENST00000216774 AGFG1P52594 562 aaKnown RBP12.36□□□□□ -0.43
SRP54-201ENST00000216774 MRPL28Q13084 256 aaKnown RBP12.36□□□□□ -0.43
SRP54-201ENST00000216774 ZNF767PQ75MW2 155 aa12.36□□□□□ -0.43
SRP54-201ENST00000216774 ASPGQ86U10 573 aa12.36□□□□□ -0.43
SRP54-201ENST00000216774 AMIGO1Q86WK6 493 aa12.36□□□□□ -0.43
SRP54-201ENST00000216774 SLC37A3Q8NCC5 494 aa12.36□□□□□ -0.43
SRP54-201ENST00000216774 OR4M1Q8NGD0 313 aa12.36□□□□□ -0.43
SRP54-201ENST00000216774 TMEM239Q8WW34 195 aa12.36□□□□□ -0.43
SRP54-201ENST00000216774 COL26A1Q96A83 441 aa12.36□□□□□ -0.43
SRP54-201ENST00000216774 NACC2Q96BF6 587 aa12.36□□□□□ -0.43
SRP54-201ENST00000216774 ENAMQ9NRM1 1142 aa12.36□□□□□ -0.43
SRP54-201ENST00000216774 KCMF1Q9P0J7 381 aa12.36□□□□□ -0.43
SRP54-201ENST00000216774 TMEM5Q9Y2B1 443 aa12.36□□□□□ -0.43
SRP54-201ENST00000216774 LAMA3Q16787 3333 aa12.36□□□□□ -0.43
SRP54-201ENST00000216774 A0A1W2PP55 124 aa12.36□□□□□ -0.43
SRP54-201ENST00000216774 RFXAPO00287 272 aa12.36□□□□□ -0.43
SRP54-201ENST00000216774 OR2B3O76000 313 aa12.36□□□□□ -0.43
SRP54-201ENST00000216774 NID1P14543 1247 aa12.36□□□□□ -0.43
SRP54-201ENST00000216774 MAKP20794 623 aa12.36□□□□□ -0.43
SRP54-201ENST00000216774 HTR2AP28223 471 aa12.36□□□□□ -0.43
SRP54-201ENST00000216774 GARNL3Q5VVW2 1013 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms