RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Cypt12Q9DAR6 119 aa14.81□□□□□ -0.04
Trim39-203ENSMUST00000113706 Krt81Q9ERE2 481 aa14.81□□□□□ -0.04
Trim39-203ENSMUST00000113706 Golga4Q91VW5 2238 aa14.8□□□□□ -0.04
Trim39-203ENSMUST00000113706 6330409D20RikA2AK85 162 aa14.8□□□□□ -0.04
Trim39-203ENSMUST00000113706 Zfp937A2ANU7 503 aa14.8□□□□□ -0.04
Trim39-203ENSMUST00000113706 Gm21800J3QMJ9 180 aa14.8□□□□□ -0.04
Trim39-203ENSMUST00000113706 IlkO55222 452 aa14.8□□□□□ -0.04
Trim39-203ENSMUST00000113706 P01637 128 aa14.8□□□□□ -0.04
Trim39-203ENSMUST00000113706 Hoxa2P31245 372 aa14.8□□□□□ -0.04
Trim39-203ENSMUST00000113706 Rpl6P47911 296 aaKnown RBP14.8□□□□□ -0.04
Trim39-203ENSMUST00000113706 Tango2P54797 276 aa14.8□□□□□ -0.04
Trim39-203ENSMUST00000113706 D13Ertd608eQ3UPR8 151 aa14.8□□□□□ -0.04
Trim39-203ENSMUST00000113706 Ugt8Q64676 541 aa14.8□□□□□ -0.04
Trim39-203ENSMUST00000113706 Chst14Q80V53 376 aa14.8□□□□□ -0.04
Trim39-203ENSMUST00000113706 Acsm4Q80W40 580 aa14.8□□□□□ -0.04
Trim39-203ENSMUST00000113706 NapepldQ8BH82 396 aa14.8□□□□□ -0.04
Trim39-203ENSMUST00000113706 Prox2Q8BII1 593 aa14.8□□□□□ -0.04
Trim39-203ENSMUST00000113706 Nt5dc1Q8C5P5 467 aa14.8□□□□□ -0.04
Trim39-203ENSMUST00000113706 Ppwd1Q8CEC6 646 aaKnown RBP14.8□□□□□ -0.04
Trim39-203ENSMUST00000113706 Ttc23Q8CHY7 488 aa14.8□□□□□ -0.04
Trim39-203ENSMUST00000113706 Pdlim5Q8CI51 591 aaKnown RBP14.8□□□□□ -0.04
Trim39-203ENSMUST00000113706 Dusp7Q91Z46 422 aa14.8□□□□□ -0.04
Trim39-203ENSMUST00000113706 Ift43Q9DA69 206 aa14.8□□□□□ -0.04
Trim39-203ENSMUST00000113706 Exosc1Q9DAA6 195 aaKnown RBP14.8□□□□□ -0.04
Trim39-203ENSMUST00000113706 Loxl3Q9Z175 754 aa14.8□□□□□ -0.04
Trim39-203ENSMUST00000113706 Pmm2Q9Z2M7 242 aa14.8□□□□□ -0.04
Trim39-203ENSMUST00000113706 Ccdc166S4R181 449 aa14.8□□□□□ -0.04
Trim39-203ENSMUST00000113706 Gm13723A0A1L1SUP2 315 aa14.8□□□□□ -0.04
Trim39-203ENSMUST00000113706 Pgbd5D3YZI9 523 aa14.8□□□□□ -0.04
Trim39-203ENSMUST00000113706 Tmed7D3YZZ5 224 aa14.8□□□□□ -0.04
Trim39-203ENSMUST00000113706 Maml2F6U238 1170 aa14.8□□□□□ -0.04
Trim39-203ENSMUST00000113706 Gm17019K7N6W5 255 aa14.8□□□□□ -0.04
Trim39-203ENSMUST00000113706 Kif1cO35071 1100 aaKnown RBP14.8□□□□□ -0.04
Trim39-203ENSMUST00000113706 Amd1P0DMN7 334 aa14.8□□□□□ -0.04
Trim39-203ENSMUST00000113706 Tnfsf9P41274 309 aa14.8□□□□□ -0.04
Trim39-203ENSMUST00000113706 StsP50427 624 aa14.8□□□□□ -0.04
Trim39-203ENSMUST00000113706 HnrnpkP61979 463 aaKnown RBP14.8□□□□□ -0.04
Trim39-203ENSMUST00000113706 WhammQ571B6 793 aa14.8□□□□□ -0.04
Trim39-203ENSMUST00000113706 Ptpn21Q62136 1176 aa14.8□□□□□ -0.04
Trim39-203ENSMUST00000113706 Tas2r104Q7M723 302 aa14.8□□□□□ -0.04
Trim39-203ENSMUST00000113706 Crls1Q80ZM8 303 aa14.8□□□□□ -0.04
Trim39-203ENSMUST00000113706 Guf1Q8C3X4 651 aaKnown RBP14.8□□□□□ -0.04
Trim39-203ENSMUST00000113706 Gas2l1Q8JZP9 678 aa14.8□□□□□ -0.04
Trim39-203ENSMUST00000113706 Olfr161Q8VGB9 313 aa14.8□□□□□ -0.04
Trim39-203ENSMUST00000113706 Laptm4bQ91XQ6 227 aa14.8□□□□□ -0.04
Trim39-203ENSMUST00000113706 Acss1Q99NB1 682 aa14.8□□□□□ -0.04
Trim39-203ENSMUST00000113706 Fam166aQ9D4K5 319 aa14.8□□□□□ -0.04
Trim39-203ENSMUST00000113706 Btnl10Q9JK39 275 aa14.8□□□□□ -0.04
Trim39-203ENSMUST00000113706 Exo1Q9QZ11 837 aa14.8□□□□□ -0.04
Trim39-203ENSMUST00000113706 Clec2iQ9WVF9 217 aa14.8□□□□□ -0.04
Trim39-203ENSMUST00000113706 Rhox2dW4VSN9 191 aa14.8□□□□□ -0.04
Trim39-203ENSMUST00000113706 Cd300ld4A2A7W1 245 aa14.79□□□□□ -0.04
Trim39-203ENSMUST00000113706 Cldn34aG3UW52 211 aa14.79□□□□□ -0.04
Trim39-203ENSMUST00000113706 Agpat1O35083 285 aa14.79□□□□□ -0.04
Trim39-203ENSMUST00000113706 Atp1b1P14094 304 aaKnown RBP14.79□□□□□ -0.04
Trim39-203ENSMUST00000113706 Q3U6N9 222 aa14.79□□□□□ -0.04
Trim39-203ENSMUST00000113706 Nhlrc4Q3UP44 136 aa14.79□□□□□ -0.04
Trim39-203ENSMUST00000113706 4930512M02RikQ5SQK8 218 aa14.79□□□□□ -0.04
Trim39-203ENSMUST00000113706 Cd300ld3Q6SJQ5 245 aa14.79□□□□□ -0.04
Trim39-203ENSMUST00000113706 Tmbim1Q8BJZ3 309 aa14.79□□□□□ -0.04
Trim39-203ENSMUST00000113706 Muc20Q8BUE7 656 aa14.79□□□□□ -0.04
Trim39-203ENSMUST00000113706 Alkbh3Q8K1E6 286 aa14.79□□□□□ -0.04
Trim39-203ENSMUST00000113706 Akr1d1Q8VCX1 325 aa14.79□□□□□ -0.04
Trim39-203ENSMUST00000113706 Olfr1378Q8VGH0 315 aa14.79□□□□□ -0.04
Trim39-203ENSMUST00000113706 2200002D01RikQ9D809 114 aa14.79□□□□□ -0.04
Trim39-203ENSMUST00000113706 Jph1Q9ET80 660 aa14.79□□□□□ -0.04
Trim39-203ENSMUST00000113706 Dennd4cA6H8H2 1906 aa14.79□□□□□ -0.04
Trim39-203ENSMUST00000113706 Zfp433A0A0J9YUD4 600 aa14.79□□□□□ -0.04
Trim39-203ENSMUST00000113706 Igkv9-123A0A140T8N8 117 aa14.79□□□□□ -0.04
Trim39-203ENSMUST00000113706 Gm32687A0A1W2P6H7 600 aa14.79□□□□□ -0.04
Trim39-203ENSMUST00000113706 Gm15821A6X8J8 139 aa14.79□□□□□ -0.04
Trim39-203ENSMUST00000113706 Ccdc188F6WEU2 249 aa14.79□□□□□ -0.04
Trim39-203ENSMUST00000113706 Zfp619G3X9T2 1161 aa14.79□□□□□ -0.04
Trim39-203ENSMUST00000113706 Tbxa2rP30987 341 aa14.79□□□□□ -0.04
Trim39-203ENSMUST00000113706 Uck1P52623 277 aa14.79□□□□□ -0.04
Trim39-203ENSMUST00000113706 BmperQ8CJ69 685 aa14.79□□□□□ -0.04
Trim39-203ENSMUST00000113706 Hmg20aQ9DC33 346 aa14.79□□□□□ -0.04
Trim39-203ENSMUST00000113706 Akr1e2Q9DCT1 301 aa14.79□□□□□ -0.04
Trim39-203ENSMUST00000113706 Arr3Q9EQP6 381 aa14.79□□□□□ -0.04
Trim39-203ENSMUST00000113706 Lgi1Q9JIA1 557 aa14.79□□□□□ -0.04
Trim39-203ENSMUST00000113706 ChmlQ9QZD5 621 aa14.79□□□□□ -0.04
Trim39-203ENSMUST00000113706 Slc35a2Q9R0M8 390 aa14.79□□□□□ -0.04
Trim39-203ENSMUST00000113706 Olfr521E9Q519 321 aa14.79□□□□□ -0.04
Trim39-203ENSMUST00000113706 2410141K09RikK7N769 464 aa14.79□□□□□ -0.04
Trim39-203ENSMUST00000113706 Il13P20109 131 aa14.79□□□□□ -0.04
Trim39-203ENSMUST00000113706 LhcgrP30730 700 aa14.79□□□□□ -0.04
Trim39-203ENSMUST00000113706 TstP52196 297 aaKnown RBP14.79□□□□□ -0.04
Trim39-203ENSMUST00000113706 Fbxo40P62932 710 aa14.79□□□□□ -0.04
Trim39-203ENSMUST00000113706 Cuzd1P70412 606 aa14.79□□□□□ -0.04
Trim39-203ENSMUST00000113706 Wbp1P97764 304 aa14.79□□□□□ -0.04
Trim39-203ENSMUST00000113706 Eif1aQ60872 144 aaKnown RBP14.79□□□□□ -0.04
Trim39-203ENSMUST00000113706 Serpinf2Q61247 491 aa14.79□□□□□ -0.04
Trim39-203ENSMUST00000113706 Frg2f1Q6P3A2 227 aa14.79□□□□□ -0.04
Trim39-203ENSMUST00000113706 CapslQ6P8Y1 208 aa14.79□□□□□ -0.04
Trim39-203ENSMUST00000113706 Morn4Q6PGF2 146 aa14.79□□□□□ -0.04
Trim39-203ENSMUST00000113706 Cldn34b3Q80ZS5 209 aa14.79□□□□□ -0.04
Trim39-203ENSMUST00000113706 Mettl2Q8BMK1 389 aa14.79□□□□□ -0.04
Trim39-203ENSMUST00000113706 PxkQ8BX57 582 aa14.79□□□□□ -0.04
Trim39-203ENSMUST00000113706 Cnot2Q8C5L3 540 aaKnown RBP14.79□□□□□ -0.04
Trim39-203ENSMUST00000113706 Olfr514Q8VFZ6 310 aa14.79□□□□□ -0.04
Retrieved 100 of 22,080 RNA–protein pairs in 36 ms