RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Q8C0X8 640 aa8.09□□□□□ -1.11
Trim39-201ENSMUST00000042717 Q8C784 167 aa8.09□□□□□ -1.11
Trim39-201ENSMUST00000042717 Rbm4Q8C7Q4 361 aaKnown RBP8.09□□□□□ -1.11
Trim39-201ENSMUST00000042717 Utp4Q8R2N2 686 aaKnown RBP8.09□□□□□ -1.11
Trim39-201ENSMUST00000042717 Ogfrl1Q8VE52 464 aa8.09□□□□□ -1.11
Trim39-201ENSMUST00000042717 Rbm4bQ8VE92 357 aaKnown RBP8.09□□□□□ -1.11
Trim39-201ENSMUST00000042717 SmoxQ99K82 555 aa8.09□□□□□ -1.11
Trim39-201ENSMUST00000042717 Nkain1Q9D035 207 aa8.09□□□□□ -1.11
Trim39-201ENSMUST00000042717 Pex13Q9D0K1 405 aa8.09□□□□□ -1.11
Trim39-201ENSMUST00000042717 Dnase1l1Q9D7J6 314 aa8.09□□□□□ -1.11
Trim39-201ENSMUST00000042717 Mfsd2aQ9DA75 534 aa8.09□□□□□ -1.11
Trim39-201ENSMUST00000042717 Fstl3Q9EQC7 256 aa8.09□□□□□ -1.11
Trim39-201ENSMUST00000042717 Srebf1Q9WTN3 1134 aa8.09□□□□□ -1.11
Trim39-201ENSMUST00000042717 Cdh20Q9Z0M3 801 aa8.09□□□□□ -1.11
Trim39-201ENSMUST00000042717 Olfr1338A2ACY7 313 aa8.09□□□□□ -1.12
Trim39-201ENSMUST00000042717 LipiF6YQT7 476 aa8.09□□□□□ -1.12
Trim39-201ENSMUST00000042717 Serpinb9cI7HJI5 387 aa8.09□□□□□ -1.12
Trim39-201ENSMUST00000042717 Man2b2O54782 1018 aa8.09□□□□□ -1.12
Trim39-201ENSMUST00000042717 BgnP28653 369 aa8.09□□□□□ -1.12
Trim39-201ENSMUST00000042717 Stt3aP46978 705 aa8.09□□□□□ -1.12
Trim39-201ENSMUST00000042717 Kcnab2P62482 367 aa8.09□□□□□ -1.12
Trim39-201ENSMUST00000042717 Fam129aQ3UW53 926 aa8.09□□□□□ -1.12
Trim39-201ENSMUST00000042717 Mks1Q5SW45 561 aa8.09□□□□□ -1.12
Trim39-201ENSMUST00000042717 Galnt2Q6PB93 570 aa8.09□□□□□ -1.12
Trim39-201ENSMUST00000042717 Tigd4Q8BUZ3 513 aa8.09□□□□□ -1.12
Trim39-201ENSMUST00000042717 Ctdsp2Q8BX07 270 aa8.09□□□□□ -1.12
Trim39-201ENSMUST00000042717 Nlgn3Q8BYM5 825 aa8.09□□□□□ -1.12
Trim39-201ENSMUST00000042717 TiparpQ8C1B2 657 aa8.09□□□□□ -1.12
Trim39-201ENSMUST00000042717 Phf21bQ8C966 487 aa8.09□□□□□ -1.12
Trim39-201ENSMUST00000042717 Colec10Q8CF98 277 aa8.09□□□□□ -1.12
Trim39-201ENSMUST00000042717 C1sbQ8CFG8 688 aa8.09□□□□□ -1.12
Trim39-201ENSMUST00000042717 Wdr45Q91VM3 360 aa8.09□□□□□ -1.12
Trim39-201ENSMUST00000042717 Znf24Q91VN1 368 aa8.09□□□□□ -1.12
Trim39-201ENSMUST00000042717 MvdQ99JF5 401 aa8.09□□□□□ -1.12
Trim39-201ENSMUST00000042717 Maf1Q9D0U6 258 aa8.09□□□□□ -1.12
Trim39-201ENSMUST00000042717 D930007J09RikQ9D2K6 131 aa8.09□□□□□ -1.12
Trim39-201ENSMUST00000042717 Fabp12Q9DAK4 132 aa8.09□□□□□ -1.12
Trim39-201ENSMUST00000042717 Twsg1Q9EP52 222 aa8.09□□□□□ -1.12
Trim39-201ENSMUST00000042717 Rhox9Q9EQM5 227 aa8.09□□□□□ -1.12
Trim39-201ENSMUST00000042717 Ube4bQ9ES00 1173 aa8.09□□□□□ -1.12
Trim39-201ENSMUST00000042717 Actr10Q9QZB7 417 aa8.09□□□□□ -1.12
Trim39-201ENSMUST00000042717 Espl1P60330 2118 aa8.08□□□□□ -1.12
Trim39-201ENSMUST00000042717 Ralgapa1Q6GYP7 2035 aa8.08□□□□□ -1.12
Trim39-201ENSMUST00000042717 Gm21876F6XK35 94 aa8.08□□□□□ -1.12
Trim39-201ENSMUST00000042717 Vmn2r51L7N215 852 aa8.08□□□□□ -1.12
Trim39-201ENSMUST00000042717 Mmp2P33434 662 aa8.08□□□□□ -1.12
Trim39-201ENSMUST00000042717 Nudt2P56380 147 aa8.08□□□□□ -1.12
Trim39-201ENSMUST00000042717 Pdcd5P56812 126 aa8.08□□□□□ -1.12
Trim39-201ENSMUST00000042717 Agbl4Q09LZ8 540 aa8.08□□□□□ -1.12
Trim39-201ENSMUST00000042717 RalyQ64012 312 aaKnown RBP8.08□□□□□ -1.12
Trim39-201ENSMUST00000042717 Cyp4b1Q64462 511 aa8.08□□□□□ -1.12
Trim39-201ENSMUST00000042717 Amigo2Q80ZD9 519 aa8.08□□□□□ -1.12
Trim39-201ENSMUST00000042717 Tyw3Q8BSA9 257 aa8.08□□□□□ -1.12
Trim39-201ENSMUST00000042717 RhbgQ8BUX5 455 aa8.08□□□□□ -1.12
Trim39-201ENSMUST00000042717 Lpcat2Q8BYI6 544 aa8.08□□□□□ -1.12
Trim39-201ENSMUST00000042717 RydenQ8CAK3 290 aaKnown RBP8.08□□□□□ -1.12
Trim39-201ENSMUST00000042717 Elf5Q8VDK3 253 aa8.08□□□□□ -1.12
Trim39-201ENSMUST00000042717 Lrg1Q91XL1 342 aa8.08□□□□□ -1.12
Trim39-201ENSMUST00000042717 Hrasls5Q9CPX5 270 aa8.08□□□□□ -1.12
Trim39-201ENSMUST00000042717 Rcc1lQ9CYF5 461 aa8.08□□□□□ -1.12
Trim39-201ENSMUST00000042717 Cib4Q9D9N5 185 aa8.08□□□□□ -1.12
Trim39-201ENSMUST00000042717 Aldh6a1Q9EQ20 535 aaKnown RBP8.08□□□□□ -1.12
Trim39-201ENSMUST00000042717 Hipk3Q9ERH7 1192 aa8.08□□□□□ -1.12
Trim39-201ENSMUST00000042717 Rad18Q9QXK2 509 aaKnown RBP8.08□□□□□ -1.12
Trim39-201ENSMUST00000042717 Gm8251F6VUT6 1994 aa8.08□□□□□ -1.12
Trim39-201ENSMUST00000042717 Loxhd1C8YR32 2068 aa8.08□□□□□ -1.12
Trim39-201ENSMUST00000042717 Zfp937A2ANU7 503 aa8.08□□□□□ -1.12
Trim39-201ENSMUST00000042717 2010106E10RikA2ANY3 279 aa8.08□□□□□ -1.12
Trim39-201ENSMUST00000042717 Rex2A2AWF2 685 aa8.08□□□□□ -1.12
Trim39-201ENSMUST00000042717 Zfp605E9QAH2 694 aa8.08□□□□□ -1.12
Trim39-201ENSMUST00000042717 MbP04247 154 aa8.08□□□□□ -1.12
Trim39-201ENSMUST00000042717 Apoa2P09813 102 aa8.08□□□□□ -1.12
Trim39-201ENSMUST00000042717 Clk1P22518 483 aa8.08□□□□□ -1.12
Trim39-201ENSMUST00000042717 Crhr1P35347 415 aa8.08□□□□□ -1.12
Trim39-201ENSMUST00000042717 Tie1Q06806 1134 aa8.08□□□□□ -1.12
Trim39-201ENSMUST00000042717 Abcb7Q61102 752 aaKnown RBP8.08□□□□□ -1.12
Trim39-201ENSMUST00000042717 E2f1Q61501 430 aa8.08□□□□□ -1.12
Trim39-201ENSMUST00000042717 RgmaQ6PCX7 454 aa8.08□□□□□ -1.12
Trim39-201ENSMUST00000042717 Plekha6Q7TQG1 1173 aa8.08□□□□□ -1.12
Trim39-201ENSMUST00000042717 Olfr1015Q7TR94 312 aa8.08□□□□□ -1.12
Trim39-201ENSMUST00000042717 Rims3Q80U57 307 aa8.08□□□□□ -1.12
Trim39-201ENSMUST00000042717 Aldh3b1Q80VQ0 468 aa8.08□□□□□ -1.12
Trim39-201ENSMUST00000042717 Dzank1Q8C008 778 aa8.08□□□□□ -1.12
Trim39-201ENSMUST00000042717 Tmsb15lQ8C0W0 80 aa8.08□□□□□ -1.12
Trim39-201ENSMUST00000042717 Gm9938Q8C3P5 112 aa8.08□□□□□ -1.12
Trim39-201ENSMUST00000042717 Tmem150cQ8C8S3 249 aa8.08□□□□□ -1.12
Trim39-201ENSMUST00000042717 Olfr617Q8VGA1 318 aa8.08□□□□□ -1.12
Trim39-201ENSMUST00000042717 Olfr1047Q8VGS0 319 aa8.08□□□□□ -1.12
Trim39-201ENSMUST00000042717 Acss1Q99NB1 682 aa8.08□□□□□ -1.12
Trim39-201ENSMUST00000042717 Zswim7Q9CWQ2 152 aa8.08□□□□□ -1.12
Trim39-201ENSMUST00000042717 PacrglQ9D3X5 248 aa8.08□□□□□ -1.12
Trim39-201ENSMUST00000042717 Sec23bQ9D662 767 aa8.08□□□□□ -1.12
Trim39-201ENSMUST00000042717 Angptl2Q9R045 493 aa8.08□□□□□ -1.12
Trim39-201ENSMUST00000042717 MpdzQ8VBX6 2055 aa8.08□□□□□ -1.12
Trim39-201ENSMUST00000042717 SvilQ8K4L3 2170 aa8.07□□□□□ -1.12
Trim39-201ENSMUST00000042717 AgrnA2ASQ1 1950 aa8.07□□□□□ -1.12
Trim39-201ENSMUST00000042717 CN725425A0A087WRU1 652 aa8.07□□□□□ -1.12
Trim39-201ENSMUST00000042717 Olfr1032A2ATE5 310 aa8.07□□□□□ -1.12
Trim39-201ENSMUST00000042717 Vmn2r90E9PXJ8 863 aa8.07□□□□□ -1.12
Trim39-201ENSMUST00000042717 Psmc3ipO35047 217 aa8.07□□□□□ -1.12
Retrieved 100 of 22,080 RNA–protein pairs in 31.9 ms