RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 hCG_2039718K7EN88 272 aa15.93■□□□□ 0.14
PHGDH-234ENST00000642041 FAAHO00519 579 aa15.93■□□□□ 0.14
PHGDH-234ENST00000642041 AP3D1O14617 1153 aa15.93■□□□□ 0.14
PHGDH-234ENST00000642041 LDB3O75112 727 aa15.93■□□□□ 0.14
PHGDH-234ENST00000642041 CCNB2O95067 398 aa15.93■□□□□ 0.14
PHGDH-234ENST00000642041 MT-ND1P03886 318 aa15.93■□□□□ 0.14
PHGDH-234ENST00000642041 PDGFAP04085 211 aa15.93■□□□□ 0.14
PHGDH-234ENST00000642041 FBLP22087 321 aaKnown RBP15.93■□□□□ 0.14
PHGDH-234ENST00000642041 MAP3K8P41279 467 aa15.93■□□□□ 0.14
PHGDH-234ENST00000642041 CRYBA2P53672 197 aa15.93■□□□□ 0.14
PHGDH-234ENST00000642041 ESRRGP62508 458 aa15.93■□□□□ 0.14
PHGDH-234ENST00000642041 OLR1P78380 273 aa15.93■□□□□ 0.14
PHGDH-234ENST00000642041 SPIBQ01892 262 aa15.93■□□□□ 0.14
PHGDH-234ENST00000642041 TEKQ02763 1124 aa15.93■□□□□ 0.14
PHGDH-234ENST00000642041 FUT7Q11130 342 aa15.93■□□□□ 0.14
PHGDH-234ENST00000642041 LIN52Q52LA3 116 aa15.93■□□□□ 0.14
PHGDH-234ENST00000642041 RBM48Q5RL73 367 aaKnown RBP15.93■□□□□ 0.14
PHGDH-234ENST00000642041 DCST1Q5T197 706 aa15.93■□□□□ 0.14
PHGDH-234ENST00000642041 FAM180BQ6P0A1 224 aa15.93■□□□□ 0.14
PHGDH-234ENST00000642041 FAHD1Q6P587 224 aa15.93■□□□□ 0.14
PHGDH-234ENST00000642041 TTLL10Q6ZVT0 673 aa15.93■□□□□ 0.14
PHGDH-234ENST00000642041 THAP5Q7Z6K1 395 aa15.93■□□□□ 0.14
PHGDH-234ENST00000642041 ZNF619Q8N2I2 560 aa15.93■□□□□ 0.14
PHGDH-234ENST00000642041 PARP8Q8N3A8 854 aa15.93■□□□□ 0.14
PHGDH-234ENST00000642041 SLC9A6Q92581 669 aa15.93■□□□□ 0.14
PHGDH-234ENST00000642041 OTUB1Q96FW1 271 aaPredicted RBP15.93■□□□□ 0.14
PHGDH-234ENST00000642041 SLC35A4Q96G79 324 aa15.93■□□□□ 0.14
PHGDH-234ENST00000642041 DHRS1Q96LJ7 313 aa15.93■□□□□ 0.14
PHGDH-234ENST00000642041 SDF2Q99470 211 aa15.93■□□□□ 0.14
PHGDH-234ENST00000642041 MRPS26Q9BYN8 205 aaKnown RBP15.93■□□□□ 0.14
PHGDH-234ENST00000642041 SPRTNQ9H040 489 aaPredicted RBP15.93■□□□□ 0.14
PHGDH-234ENST00000642041 ING2Q9H160 280 aa15.93■□□□□ 0.14
PHGDH-234ENST00000642041 KRT84Q9NSB2 600 aa15.93■□□□□ 0.14
PHGDH-234ENST00000642041 FAM118AQ9NWS6 357 aa15.93■□□□□ 0.14
PHGDH-234ENST00000642041 OCIAD1Q9NX40 245 aa15.93■□□□□ 0.14
PHGDH-234ENST00000642041 ABCG2Q9UNQ0 655 aa15.93■□□□□ 0.14
PHGDH-234ENST00000642041 LYVE1Q9Y5Y7 322 aa15.93■□□□□ 0.14
PHGDH-234ENST00000642041 SCN3AQ9NY46 2000 aa15.93■□□□□ 0.14
PHGDH-234ENST00000642041 CSMD2Q7Z408 3487 aa15.93■□□□□ 0.14
PHGDH-234ENST00000642041 LOC100130705A0A1B0GUX0 176 aa15.92■□□□□ 0.14
PHGDH-234ENST00000642041 A0A1W2PRQ8 180 aa15.92■□□□□ 0.14
PHGDH-234ENST00000642041 HTR3EA5X5Y0 456 aa15.92■□□□□ 0.14
PHGDH-234ENST00000642041 MPZL2O60487 215 aa15.92■□□□□ 0.14
PHGDH-234ENST00000642041 FMO6PO60774 539 aa15.92■□□□□ 0.14
PHGDH-234ENST00000642041 ADAP00813 363 aa15.92■□□□□ 0.14
PHGDH-234ENST00000642041 H1F0P07305 194 aaKnown RBP15.92■□□□□ 0.14
PHGDH-234ENST00000642041 PRF1P14222 555 aa15.92■□□□□ 0.14
PHGDH-234ENST00000642041 IL7RP16871 459 aa15.92■□□□□ 0.14
PHGDH-234ENST00000642041 TNNI3P19429 210 aa15.92■□□□□ 0.14
PHGDH-234ENST00000642041 ALAS2P22557 587 aa15.92■□□□□ 0.14
PHGDH-234ENST00000642041 TTKP33981 857 aa15.92■□□□□ 0.14
PHGDH-234ENST00000642041 TRHRP34981 398 aaPredicted RBP15.92■□□□□ 0.14
PHGDH-234ENST00000642041 SH3BGRP55822 239 aaPredicted RBP15.92■□□□□ 0.14
PHGDH-234ENST00000642041 CXCR4P61073 352 aa15.92■□□□□ 0.14
PHGDH-234ENST00000642041 RPS26P62854 115 aaKnown RBP15.92■□□□□ 0.14
PHGDH-234ENST00000642041 OCA2Q04671 838 aa15.92■□□□□ 0.14
PHGDH-234ENST00000642041 MGAT2Q10469 447 aa15.92■□□□□ 0.14
PHGDH-234ENST00000642041 ST3GAL3Q11203 375 aa15.92■□□□□ 0.14
PHGDH-234ENST00000642041 MRPL49Q13405 166 aaKnown RBP15.92■□□□□ 0.14
PHGDH-234ENST00000642041 DGCR6Q14129 220 aa15.92■□□□□ 0.14
PHGDH-234ENST00000642041 DUSP7Q16829 419 aa15.92■□□□□ 0.14
PHGDH-234ENST00000642041 CYP27C1Q4G0S4 372 aa15.92■□□□□ 0.14
PHGDH-234ENST00000642041 TTC33Q6PID6 262 aaPredicted RBP15.92■□□□□ 0.14
PHGDH-234ENST00000642041 PRSS41Q7RTY9 318 aa15.92■□□□□ 0.14
PHGDH-234ENST00000642041 DEPDC4Q8N2C3 294 aa15.92■□□□□ 0.14
PHGDH-234ENST00000642041 OR5T3Q8NGG3 340 aa15.92■□□□□ 0.14
PHGDH-234ENST00000642041 OR5D16Q8NGK9 328 aa15.92■□□□□ 0.14
PHGDH-234ENST00000642041 OR52P1PQ8NH57 321 aa15.92■□□□□ 0.14
PHGDH-234ENST00000642041 OR14A16Q8NHC5 309 aa15.92■□□□□ 0.14
PHGDH-234ENST00000642041 FNDC11Q9BVV2 318 aa15.92■□□□□ 0.14
PHGDH-234ENST00000642041 AMBRA1Q9C0C7 1298 aa15.92■□□□□ 0.14
PHGDH-234ENST00000642041 ZNF350Q9GZX5 532 aa15.92■□□□□ 0.14
PHGDH-234ENST00000642041 SLC38A1Q9H2H9 487 aa15.92■□□□□ 0.14
PHGDH-234ENST00000642041 SERHL2Q9H4I8 314 aa15.92■□□□□ 0.14
PHGDH-234ENST00000642041 VCX3AQ9NNX9 186 aa15.92■□□□□ 0.14
PHGDH-234ENST00000642041 ADAP2Q9NPF8 381 aa15.92■□□□□ 0.14
PHGDH-234ENST00000642041 NDOR1Q9UHB4 597 aa15.92■□□□□ 0.14
PHGDH-234ENST00000642041 DNHD1Q96M86 4753 aa15.91■□□□□ 0.14
PHGDH-234ENST00000642041 A0A087WXM4 84 aa15.91■□□□□ 0.14
PHGDH-234ENST00000642041 OR6C76A6NM76 312 aa15.91■□□□□ 0.14
PHGDH-234ENST00000642041 TMEM229AB2RXF0 380 aa15.91■□□□□ 0.14
PHGDH-234ENST00000642041 DLGAP1O14490 977 aa15.91■□□□□ 0.14
PHGDH-234ENST00000642041 UGT2B17O75795 530 aa15.91■□□□□ 0.14
PHGDH-234ENST00000642041 GSTM3P21266 225 aa15.91■□□□□ 0.14
PHGDH-234ENST00000642041 RORAP35398 523 aa15.91■□□□□ 0.14
PHGDH-234ENST00000642041 NUP107P57740 925 aa15.91■□□□□ 0.14
PHGDH-234ENST00000642041 ELAVL1Q15717 326 aaKnown RBP15.91■□□□□ 0.14
PHGDH-234ENST00000642041 MAPK11Q15759 364 aa15.91■□□□□ 0.14
PHGDH-234ENST00000642041 ZNF750Q32MQ0 723 aa15.91■□□□□ 0.14
PHGDH-234ENST00000642041 TRMT12Q53H54 448 aaKnown RBP15.91■□□□□ 0.14
PHGDH-234ENST00000642041 RANBP3LQ86VV4 465 aaPredicted RBP15.91■□□□□ 0.14
PHGDH-234ENST00000642041 OR4N5Q8IXE1 308 aa15.91■□□□□ 0.14
PHGDH-234ENST00000642041 OR10G2Q8NGC3 310 aa15.91■□□□□ 0.14
PHGDH-234ENST00000642041 OR1L3Q8NH93 324 aa15.91■□□□□ 0.14
PHGDH-234ENST00000642041 GPR151Q8TDV0 419 aa15.91■□□□□ 0.14
PHGDH-234ENST00000642041 SLC38A4Q969I6 547 aa15.91■□□□□ 0.14
PHGDH-234ENST00000642041 MARVELD3Q96A59 401 aa15.91■□□□□ 0.14
PHGDH-234ENST00000642041 C16orf58Q96GQ5 468 aa15.91■□□□□ 0.14
PHGDH-234ENST00000642041 PRRC1Q96M27 445 aa15.91■□□□□ 0.14
PHGDH-234ENST00000642041 PTCHD1Q96NR3 888 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms