RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 EXOSC7Q15024 291 aaKnown RBP15.67■□□□□ 0.1
PHGDH-223ENST00000641597 PGGHGQ32M88 737 aa15.67■□□□□ 0.1
PHGDH-223ENST00000641597 ZNF628Q5EBL2 1059 aa15.67■□□□□ 0.1
PHGDH-223ENST00000641597 ZNF544Q6NX49 715 aa15.67■□□□□ 0.1
PHGDH-223ENST00000641597 ZAR1Q86SH2 424 aa15.67■□□□□ 0.1
PHGDH-223ENST00000641597 PAQR7Q86WK9 346 aa15.67■□□□□ 0.1
PHGDH-223ENST00000641597 CLDN22Q8N7P3 220 aa15.67■□□□□ 0.1
PHGDH-223ENST00000641597 MRPS18AQ9NVS2 196 aaKnown RBP15.67■□□□□ 0.1
PHGDH-223ENST00000641597 IL20Q9NYY1 176 aa15.67■□□□□ 0.1
PHGDH-223ENST00000641597 KCMF1Q9P0J7 381 aa15.67■□□□□ 0.1
PHGDH-223ENST00000641597 CACNA1IQ9P0X4 2223 aa15.67■□□□□ 0.1
PHGDH-223ENST00000641597 GABRPO00591 440 aa15.67■□□□□ 0.1
PHGDH-223ENST00000641597 KLF4O43474 513 aa15.67■□□□□ 0.1
PHGDH-223ENST00000641597 IDH3BO43837 385 aa15.67■□□□□ 0.1
PHGDH-223ENST00000641597 MRPL3P09001 348 aaKnown RBP15.67■□□□□ 0.1
PHGDH-223ENST00000641597 POLR2CP19387 275 aaPredicted RBP15.67■□□□□ 0.1
PHGDH-223ENST00000641597 GABRA5P31644 462 aa15.67■□□□□ 0.1
PHGDH-223ENST00000641597 KIR2DL1P43626 348 aaPredicted RBP15.67■□□□□ 0.1
PHGDH-223ENST00000641597 CTBP2P56545 445 aa15.67■□□□□ 0.1
PHGDH-223ENST00000641597 ZNF761Q86XN6 746 aaPredicted RBP15.67■□□□□ 0.1
PHGDH-223ENST00000641597 ARIH2OSQ8N7S6 290 aa15.67■□□□□ 0.1
PHGDH-223ENST00000641597 TMEM99Q8N816 258 aa15.67■□□□□ 0.1
PHGDH-223ENST00000641597 NEIL3Q8TAT5 605 aa15.67■□□□□ 0.1
PHGDH-223ENST00000641597 EFHD2Q96C19 240 aaPredicted RBP15.67■□□□□ 0.1
PHGDH-223ENST00000641597 RNF32Q9H0A6 362 aa15.67■□□□□ 0.1
PHGDH-223ENST00000641597 UBQLN3Q9H347 655 aa15.67■□□□□ 0.1
PHGDH-223ENST00000641597 CLCA3PQ9Y6N3 262 aa15.67■□□□□ 0.1
PHGDH-223ENST00000641597 LRRC72A6NJI9 287 aa15.66■□□□□ 0.1
PHGDH-223ENST00000641597 SYT5O00445 386 aa15.66■□□□□ 0.1
PHGDH-223ENST00000641597 STK25O00506 426 aa15.66■□□□□ 0.1
PHGDH-223ENST00000641597 ADH1BP00325 375 aa15.66■□□□□ 0.1
PHGDH-223ENST00000641597 CTSBP07858 339 aa15.66■□□□□ 0.1
PHGDH-223ENST00000641597 CD83Q01151 205 aa15.66■□□□□ 0.1
PHGDH-223ENST00000641597 GNA13Q14344 377 aa15.66■□□□□ 0.1
PHGDH-223ENST00000641597 EOGTQ5NDL2 527 aa15.66■□□□□ 0.1
PHGDH-223ENST00000641597 THSD4Q6ZMP0 1018 aa15.66■□□□□ 0.1
PHGDH-223ENST00000641597 TMEM91Q6ZNR0 172 aa15.66■□□□□ 0.1
PHGDH-223ENST00000641597 LRRC25Q8N386 305 aaPredicted RBP15.66■□□□□ 0.1
PHGDH-223ENST00000641597 HERVK_113Q902F9 699 aa15.66■□□□□ 0.1
PHGDH-223ENST00000641597 TIMP4Q99727 224 aa15.66■□□□□ 0.1
PHGDH-223ENST00000641597 PRSS27Q9BQR3 290 aa15.66■□□□□ 0.1
PHGDH-223ENST00000641597 SRMSQ9H3Y6 488 aa15.66■□□□□ 0.1
PHGDH-223ENST00000641597 CFAP54Q96N23 3096 aa15.66■□□□□ 0.1
PHGDH-223ENST00000641597 E9PI62 339 aa15.66■□□□□ 0.1
PHGDH-223ENST00000641597 MAGEB4O15481 346 aaPredicted RBP15.66■□□□□ 0.1
PHGDH-223ENST00000641597 HCRTR1O43613 425 aa15.66■□□□□ 0.1
PHGDH-223ENST00000641597 GUCY1B2O75343 617 aa15.66■□□□□ 0.1
PHGDH-223ENST00000641597 FPR3P25089 353 aa15.66■□□□□ 0.1
PHGDH-223ENST00000641597 ACTR1BP42025 376 aa15.66■□□□□ 0.1
PHGDH-223ENST00000641597 ANXA11P50995 505 aaKnown RBP15.66■□□□□ 0.1
PHGDH-223ENST00000641597 RAB25P57735 213 aa15.66■□□□□ 0.1
PHGDH-223ENST00000641597 ACTR1AP61163 376 aa15.66■□□□□ 0.1
PHGDH-223ENST00000641597 ASPGQ86U10 573 aa15.66■□□□□ 0.1
PHGDH-223ENST00000641597 FAM181AQ8N9Y4 354 aa15.66■□□□□ 0.1
PHGDH-223ENST00000641597 ATF6BQ99941 703 aa15.66■□□□□ 0.1
PHGDH-223ENST00000641597 GYPBP06028 91 aa15.65■□□□□ 0.1
PHGDH-223ENST00000641597 EN2P19622 333 aaPredicted RBP15.65■□□□□ 0.1
PHGDH-223ENST00000641597 PRKAR1BP31321 381 aa15.65■□□□□ 0.1
PHGDH-223ENST00000641597 SLC16A1P53985 500 aa15.65■□□□□ 0.1
PHGDH-223ENST00000641597 PPP1CAP62136 330 aa15.65■□□□□ 0.1
PHGDH-223ENST00000641597 PLAURQ03405 335 aa15.65■□□□□ 0.1
PHGDH-223ENST00000641597 CEBPEQ15744 281 aa15.65■□□□□ 0.1
PHGDH-223ENST00000641597 KLHL12Q53G59 568 aa15.65■□□□□ 0.1
PHGDH-223ENST00000641597 ZNF776Q68DI1 518 aaPredicted RBP15.65■□□□□ 0.1
PHGDH-223ENST00000641597 HEPHL1Q6MZM0 1159 aa15.65■□□□□ 0.1
PHGDH-223ENST00000641597 XKRXQ6PP77 449 aa15.65■□□□□ 0.1
PHGDH-223ENST00000641597 MBOAT2Q6ZWT7 520 aa15.65■□□□□ 0.1
PHGDH-223ENST00000641597 LINC00471Q8N535 108 aa15.65■□□□□ 0.1
PHGDH-223ENST00000641597 CYB561A3Q8NBI2 242 aa15.65■□□□□ 0.1
PHGDH-223ENST00000641597 SDF2Q99470 211 aa15.65■□□□□ 0.1
PHGDH-223ENST00000641597 RAB11FIP5Q9BXF6 653 aa15.65■□□□□ 0.1
PHGDH-223ENST00000641597 SFXN1Q9H9B4 322 aa15.65■□□□□ 0.1
PHGDH-223ENST00000641597 KLHL28Q9NXS3 571 aa15.65■□□□□ 0.1
PHGDH-223ENST00000641597 FANCMQ8IYD8 2048 aa15.65■□□□□ 0.1
PHGDH-223ENST00000641597 EPOPA6NHQ4 379 aa15.65■□□□□ 0.1
PHGDH-223ENST00000641597 C12orf71A8MTZ7 269 aa15.65■□□□□ 0.1
PHGDH-223ENST00000641597 GPR89AB7ZAQ6 455 aa15.65■□□□□ 0.1
PHGDH-223ENST00000641597 PLRG1O43660 514 aaKnown RBP15.65■□□□□ 0.1
PHGDH-223ENST00000641597 GPR89BP0CG08 455 aa15.65■□□□□ 0.1
PHGDH-223ENST00000641597 NOS3P29474 1203 aa15.65■□□□□ 0.1
PHGDH-223ENST00000641597 ABATP80404 500 aa15.65■□□□□ 0.1
PHGDH-223ENST00000641597 TNFRSF17Q02223 184 aa15.65■□□□□ 0.1
PHGDH-223ENST00000641597 ENPP2Q13822 863 aa15.65■□□□□ 0.1
PHGDH-223ENST00000641597 DECR1Q16698 335 aa15.65■□□□□ 0.1
PHGDH-223ENST00000641597 PRRT3Q5FWE3 981 aa15.65■□□□□ 0.1
PHGDH-223ENST00000641597 CDC73Q6P1J9 531 aa15.65■□□□□ 0.1
PHGDH-223ENST00000641597 RPTNQ6XPR3 784 aa15.65■□□□□ 0.1
PHGDH-223ENST00000641597 FLVCR1-AS1Q8TAF5 88 aa15.65■□□□□ 0.1
PHGDH-223ENST00000641597 SETD6Q8TBK2 473 aa15.65■□□□□ 0.1
PHGDH-223ENST00000641597 MS4A4EQ96PG1 132 aa15.65■□□□□ 0.1
PHGDH-223ENST00000641597 OR2M4Q96R27 311 aa15.65■□□□□ 0.1
PHGDH-223ENST00000641597 OR52D1Q9H346 318 aa15.65■□□□□ 0.1
PHGDH-223ENST00000641597 CCDC86Q9H6F5 360 aaKnown RBP15.65■□□□□ 0.1
PHGDH-223ENST00000641597 GDE1Q9NZC3 331 aa15.65■□□□□ 0.1
PHGDH-223ENST00000641597 KLF15Q9UIH9 416 aa15.65■□□□□ 0.1
PHGDH-223ENST00000641597 EXOSC1Q9Y3B2 195 aaKnown RBP15.65■□□□□ 0.1
PHGDH-223ENST00000641597 TDRD6O60522 2096 aaKnown RBP15.64■□□□□ 0.09
PHGDH-223ENST00000641597 TRAV27A0A087WT01 109 aa15.64■□□□□ 0.09
PHGDH-223ENST00000641597 TTC36A6NLP5 189 aa15.64■□□□□ 0.09
PHGDH-223ENST00000641597 ADAM11O75078 769 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms