RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 PPP1R16AQ96I34 528 aa12.87□□□□□ -0.35
SCARB2-227ENST00000640957 TRMT61BQ9BVS5 477 aaKnown RBP12.87□□□□□ -0.35
SCARB2-227ENST00000640957 HCAR1Q9BXC0 346 aa12.87□□□□□ -0.35
SCARB2-227ENST00000640957 SHARPINQ9H0F6 387 aa12.87□□□□□ -0.35
SCARB2-227ENST00000640957 SCPEP1Q9HB40 452 aa12.87□□□□□ -0.35
SCARB2-227ENST00000640957 GPBP1L1Q9HC44 474 aaPredicted RBP12.87□□□□□ -0.35
SCARB2-227ENST00000640957 TNFRSF10DQ9UBN6 386 aa12.87□□□□□ -0.35
SCARB2-227ENST00000640957 GPR55Q9Y2T6 319 aaPredicted RBP12.87□□□□□ -0.35
SCARB2-227ENST00000640957 PGRMC2O15173 223 aa12.87□□□□□ -0.35
SCARB2-227ENST00000640957 DPM1O60762 260 aa12.87□□□□□ -0.35
SCARB2-227ENST00000640957 F12P00748 615 aaPredicted RBP12.87□□□□□ -0.35
SCARB2-227ENST00000640957 TAS2R41P59536 307 aa12.87□□□□□ -0.35
SCARB2-227ENST00000640957 OCLNQ16625 522 aa12.87□□□□□ -0.35
SCARB2-227ENST00000640957 Q6ZVU0 165 aa12.87□□□□□ -0.35
SCARB2-227ENST00000640957 KLHL36Q8N4N3 616 aa12.87□□□□□ -0.35
SCARB2-227ENST00000640957 MEIOBQ8N635 442 aa12.87□□□□□ -0.35
SCARB2-227ENST00000640957 AMER3Q8N944 861 aa12.87□□□□□ -0.35
SCARB2-227ENST00000640957 OR8K3Q8NH51 312 aa12.87□□□□□ -0.35
SCARB2-227ENST00000640957 YIPF5Q969M3 257 aa12.87□□□□□ -0.35
SCARB2-227ENST00000640957 ECHDC3Q96DC8 303 aa12.87□□□□□ -0.35
SCARB2-227ENST00000640957 CYSLTR2Q9NS75 346 aa12.87□□□□□ -0.35
SCARB2-227ENST00000640957 CACNA1IQ9P0X4 2223 aa12.87□□□□□ -0.35
SCARB2-227ENST00000640957 SCN2AQ99250 2005 aa12.87□□□□□ -0.35
SCARB2-227ENST00000640957 MEIKINA0A087WXM9 373 aa12.87□□□□□ -0.35
SCARB2-227ENST00000640957 ANTXRLA6NF34 631 aa12.87□□□□□ -0.35
SCARB2-227ENST00000640957 TRABD2BA6NFA1 517 aa12.87□□□□□ -0.35
SCARB2-227ENST00000640957 NEDD8-MDP1E9PL57 170 aa12.87□□□□□ -0.35
SCARB2-227ENST00000640957 IGSF6O95976 241 aa12.87□□□□□ -0.35
SCARB2-227ENST00000640957 C8GP07360 202 aa12.87□□□□□ -0.35
SCARB2-227ENST00000640957 CBR1P16152 277 aa12.87□□□□□ -0.35
SCARB2-227ENST00000640957 TBPL1P62380 186 aa12.87□□□□□ -0.35
SCARB2-227ENST00000640957 TAP2Q03519 686 aa12.87□□□□□ -0.35
SCARB2-227ENST00000640957 GNA13Q14344 377 aa12.87□□□□□ -0.35
SCARB2-227ENST00000640957 RPE65Q16518 533 aa12.87□□□□□ -0.35
SCARB2-227ENST00000640957 GGTA1PQ4G0N0 100 aa12.87□□□□□ -0.35
SCARB2-227ENST00000640957 TMEM201Q5SNT2 666 aa12.87□□□□□ -0.35
SCARB2-227ENST00000640957 LIPJQ5W064 366 aa12.87□□□□□ -0.35
SCARB2-227ENST00000640957 NKAIN4Q8IVV8 208 aa12.87□□□□□ -0.35
SCARB2-227ENST00000640957 OR10Z1Q8NGY1 313 aa12.87□□□□□ -0.35
SCARB2-227ENST00000640957 OR4Q3Q8NH05 313 aa12.87□□□□□ -0.35
SCARB2-227ENST00000640957 TMEM159Q96B96 161 aa12.87□□□□□ -0.35
SCARB2-227ENST00000640957 C20orf85Q9H1P6 137 aa12.87□□□□□ -0.35
SCARB2-227ENST00000640957 NT5DC2Q9H857 520 aa12.87□□□□□ -0.35
SCARB2-227ENST00000640957 FANCFQ9NPI8 374 aa12.87□□□□□ -0.35
SCARB2-227ENST00000640957 PFDN2Q9UHV9 154 aa12.87□□□□□ -0.35
SCARB2-227ENST00000640957 AUP1Q9Y679 476 aa12.87□□□□□ -0.35
SCARB2-227ENST00000640957 KCNE3Q9Y6H6 103 aa12.87□□□□□ -0.35
SCARB2-227ENST00000640957 ZNF197O14709 1029 aa12.86□□□□□ -0.35
SCARB2-227ENST00000640957 RD3LP0DJH9 198 aa12.86□□□□□ -0.35
SCARB2-227ENST00000640957 DRD2P14416 443 aa12.86□□□□□ -0.35
SCARB2-227ENST00000640957 LASP1Q14847 261 aaKnown RBP12.86□□□□□ -0.35
SCARB2-227ENST00000640957 ATXN7L3Q14CW9 347 aaPredicted RBP12.86□□□□□ -0.35
SCARB2-227ENST00000640957 CD276Q5ZPR3 534 aa12.86□□□□□ -0.35
SCARB2-227ENST00000640957 ADAMTS19Q8TE59 1207 aa12.86□□□□□ -0.35
SCARB2-227ENST00000640957 SLC38A2Q96QD8 506 aa12.86□□□□□ -0.35
SCARB2-227ENST00000640957 ENKD1Q9H0I2 346 aa12.86□□□□□ -0.35
SCARB2-227ENST00000640957 B4GALT6Q9UBX8 382 aa12.86□□□□□ -0.35
SCARB2-227ENST00000640957 SCP2D1Q9UJQ7 156 aa12.86□□□□□ -0.35
SCARB2-227ENST00000640957 POMT2Q9UKY4 750 aa12.86□□□□□ -0.35
SCARB2-227ENST00000640957 C7orf66A4D0T2 115 aa12.86□□□□□ -0.35
SCARB2-227ENST00000640957 MFSD2BA6NFX1 497 aa12.86□□□□□ -0.35
SCARB2-227ENST00000640957 HMGN4O00479 90 aa12.86□□□□□ -0.35
SCARB2-227ENST00000640957 STK25O00506 426 aa12.86□□□□□ -0.35
SCARB2-227ENST00000640957 RNF13O43567 381 aa12.86□□□□□ -0.35
SCARB2-227ENST00000640957 RB1P06400 928 aa12.86□□□□□ -0.35
SCARB2-227ENST00000640957 ZP3P21754 424 aa12.86□□□□□ -0.35
SCARB2-227ENST00000640957 PSMA6P60900 246 aaKnown RBP12.86□□□□□ -0.35
SCARB2-227ENST00000640957 BTG1P62324 171 aa12.86□□□□□ -0.35
SCARB2-227ENST00000640957 CTAG1AP78358 180 aa12.86□□□□□ -0.35
SCARB2-227ENST00000640957 RAB40BQ12829 278 aa12.86□□□□□ -0.35
SCARB2-227ENST00000640957 C2orf68Q2NKX9 166 aa12.86□□□□□ -0.35
SCARB2-227ENST00000640957 HES5Q5TA89 166 aa12.86□□□□□ -0.35
SCARB2-227ENST00000640957 CHST14Q8NCH0 376 aa12.86□□□□□ -0.35
SCARB2-227ENST00000640957 OR5M1Q8NGP8 315 aa12.86□□□□□ -0.35
SCARB2-227ENST00000640957 OR51Q1Q8NH59 317 aa12.86□□□□□ -0.35
SCARB2-227ENST00000640957 ZNF461Q8TAF7 563 aa12.86□□□□□ -0.35
SCARB2-227ENST00000640957 LRRC46Q96FV0 321 aa12.86□□□□□ -0.35
SCARB2-227ENST00000640957 WBP1Q96G27 269 aa12.86□□□□□ -0.35
SCARB2-227ENST00000640957 DERL3Q96Q80 235 aa12.86□□□□□ -0.35
SCARB2-227ENST00000640957 TEFMQ96QE5 360 aaKnown RBP12.86□□□□□ -0.35
SCARB2-227ENST00000640957 SLC25A18Q9H1K4 315 aa12.86□□□□□ -0.35
SCARB2-227ENST00000640957 MAN2C1Q9NTJ4 1040 aa12.86□□□□□ -0.35
SCARB2-227ENST00000640957 RPS6KB2Q9UBS0 482 aa12.86□□□□□ -0.35
SCARB2-227ENST00000640957 KLHL18O94889 574 aa12.86□□□□□ -0.35
SCARB2-227ENST00000640957 OR5F1O95221 314 aa12.86□□□□□ -0.35
SCARB2-227ENST00000640957 HOXD10P28358 340 aa12.86□□□□□ -0.35
SCARB2-227ENST00000640957 PYCR1P32322 319 aa12.86□□□□□ -0.35
SCARB2-227ENST00000640957 GDNFP39905 211 aa12.86□□□□□ -0.35
SCARB2-227ENST00000640957 MAPK9P45984 424 aa12.86□□□□□ -0.35
SCARB2-227ENST00000640957 GPR85P60893 370 aa12.86□□□□□ -0.35
SCARB2-227ENST00000640957 LGALS3BPQ08380 585 aa12.86□□□□□ -0.35
SCARB2-227ENST00000640957 LRRC37A5PQ49AS3 106 aa12.86□□□□□ -0.35
SCARB2-227ENST00000640957 OAFQ86UD1 273 aa12.86□□□□□ -0.35
SCARB2-227ENST00000640957 ARL14Q8N4G2 192 aa12.86□□□□□ -0.35
SCARB2-227ENST00000640957 C16orf58Q96GQ5 468 aa12.86□□□□□ -0.35
SCARB2-227ENST00000640957 SAMD8Q96LT4 415 aa12.86□□□□□ -0.35
SCARB2-227ENST00000640957 OR2M2Q96R28 347 aa12.86□□□□□ -0.35
SCARB2-227ENST00000640957 MED18Q9BUE0 208 aa12.86□□□□□ -0.35
SCARB2-227ENST00000640957 BHLHE41Q9C0J9 482 aaPredicted RBP12.86□□□□□ -0.35
SCARB2-227ENST00000640957 TMEM38AQ9H6F2 299 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms