RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 A8MV72 311 aaPredicted RBP7.41□□□□□ -1.22
SCARB2-220ENST00000640076 ANKRD65E5RJM6 399 aa7.41□□□□□ -1.22
SCARB2-220ENST00000640076 FGF17O60258 216 aa7.41□□□□□ -1.22
SCARB2-220ENST00000640076 B4GALT2O60909 372 aa7.41□□□□□ -1.22
SCARB2-220ENST00000640076 LDB3O75112 727 aa7.41□□□□□ -1.22
SCARB2-220ENST00000640076 JRKO75564 520 aa7.41□□□□□ -1.22
SCARB2-220ENST00000640076 CDC123O75794 336 aaPredicted RBP7.41□□□□□ -1.22
SCARB2-220ENST00000640076 BMP10O95393 424 aa7.41□□□□□ -1.22
SCARB2-220ENST00000640076 CPSF4O95639 269 aaKnown RBP7.41□□□□□ -1.22
SCARB2-220ENST00000640076 GPR75O95800 540 aa7.41□□□□□ -1.22
SCARB2-220ENST00000640076 ONECUT2O95948 504 aa7.41□□□□□ -1.22
SCARB2-220ENST00000640076 FHP07954 510 aa7.41□□□□□ -1.22
SCARB2-220ENST00000640076 C8orf89P0DMQ9 161 aa7.41□□□□□ -1.22
SCARB2-220ENST00000640076 CSNK2A2P19784 350 aaPredicted RBP7.41□□□□□ -1.22
SCARB2-220ENST00000640076 IL10P22301 178 aa7.41□□□□□ -1.22
SCARB2-220ENST00000640076 NTSP30990 170 aa7.41□□□□□ -1.22
SCARB2-220ENST00000640076 FEN1P39748 380 aaKnown RBP7.41□□□□□ -1.22
SCARB2-220ENST00000640076 SMCPP49901 116 aaPredicted RBP7.41□□□□□ -1.22
SCARB2-220ENST00000640076 PSME3P61289 254 aa7.41□□□□□ -1.22
SCARB2-220ENST00000640076 DCDP81605 110 aaKnown RBP7.41□□□□□ -1.22
SCARB2-220ENST00000640076 DUSP2Q05923 314 aa7.41□□□□□ -1.22
SCARB2-220ENST00000640076 C2orf76Q3KRA6 126 aa7.41□□□□□ -1.22
SCARB2-220ENST00000640076 GTDC1Q4AE62 458 aa7.41□□□□□ -1.22
SCARB2-220ENST00000640076 DNAL1Q4LDG9 190 aa7.41□□□□□ -1.22
SCARB2-220ENST00000640076 COX15Q7KZN9 410 aa7.41□□□□□ -1.22
SCARB2-220ENST00000640076 ZNF551Q7Z340 670 aaPredicted RBP7.41□□□□□ -1.22
SCARB2-220ENST00000640076 TMPRSS12Q86WS5 348 aa7.41□□□□□ -1.22
SCARB2-220ENST00000640076 OR4N5Q8IXE1 308 aa7.41□□□□□ -1.22
SCARB2-220ENST00000640076 OR4A15Q8NGL6 344 aa7.41□□□□□ -1.22
SCARB2-220ENST00000640076 WDR36Q8NI36 951 aaKnown RBP7.41□□□□□ -1.22
SCARB2-220ENST00000640076 SUN3Q8TAQ9 357 aa7.41□□□□□ -1.22
SCARB2-220ENST00000640076 OR5P2Q8WZ92 322 aa7.41□□□□□ -1.22
SCARB2-220ENST00000640076 ANKRD9Q96BM1 317 aaPredicted RBP7.41□□□□□ -1.22
SCARB2-220ENST00000640076 LRFN5Q96NI6 719 aa7.41□□□□□ -1.22
SCARB2-220ENST00000640076 OR1F2PQ96R84 312 aa7.41□□□□□ -1.22
SCARB2-220ENST00000640076 BBS4Q96RK4 519 aa7.41□□□□□ -1.22
SCARB2-220ENST00000640076 CGREF1Q99674 301 aa7.41□□□□□ -1.22
SCARB2-220ENST00000640076 HOPXQ9BPY8 73 aaPredicted RBP7.41□□□□□ -1.22
SCARB2-220ENST00000640076 THUMPD3Q9BV44 507 aaKnown RBP7.41□□□□□ -1.22
SCARB2-220ENST00000640076 CADM1Q9BY67 442 aaKnown RBP7.41□□□□□ -1.22
SCARB2-220ENST00000640076 ULBP3Q9BZM4 244 aa7.41□□□□□ -1.22
SCARB2-220ENST00000640076 GLIPR2Q9H4G4 154 aa7.41□□□□□ -1.22
SCARB2-220ENST00000640076 LANCL2Q9NS86 450 aa7.41□□□□□ -1.22
SCARB2-220ENST00000640076 GIMAP4Q9NUV9 329 aa7.41□□□□□ -1.22
SCARB2-220ENST00000640076 TAS2R9Q9NYW1 312 aa7.41□□□□□ -1.22
SCARB2-220ENST00000640076 DNAJB9Q9UBS3 223 aa7.41□□□□□ -1.22
SCARB2-220ENST00000640076 CTSFQ9UBX1 484 aa7.41□□□□□ -1.22
SCARB2-220ENST00000640076 ZNF780BQ9Y6R6 833 aa7.41□□□□□ -1.22
SCARB2-220ENST00000640076 NUP210LQ5VU65 1888 aa7.41□□□□□ -1.22
SCARB2-220ENST00000640076 SDK2Q58EX2 2172 aa7.41□□□□□ -1.22
SCARB2-220ENST00000640076 IGLV3-12A0A075B6K2 115 aa7.4□□□□□ -1.22
SCARB2-220ENST00000640076 OR2W5A6NFC9 320 aa7.4□□□□□ -1.22
SCARB2-220ENST00000640076 FAM90A20PA6NIJ5 464 aa7.4□□□□□ -1.22
SCARB2-220ENST00000640076 RAB27BO00194 218 aa7.4□□□□□ -1.22
SCARB2-220ENST00000640076 CLDN4O14493 209 aa7.4□□□□□ -1.22
SCARB2-220ENST00000640076 TSPAN4O14817 238 aa7.4□□□□□ -1.22
SCARB2-220ENST00000640076 GSC2O15499 205 aa7.4□□□□□ -1.22
SCARB2-220ENST00000640076 HNRNPRO43390 633 aaKnown RBP7.4□□□□□ -1.22
SCARB2-220ENST00000640076 CTNSO60931 367 aa7.4□□□□□ -1.22
SCARB2-220ENST00000640076 KCNK5O95279 499 aa7.4□□□□□ -1.22
SCARB2-220ENST00000640076 ANP32DO95626 131 aa7.4□□□□□ -1.22
SCARB2-220ENST00000640076 ABCB1P08183 1280 aaPredicted RBP7.4□□□□□ -1.22
SCARB2-220ENST00000640076 RPSAP08865 295 aaKnown RBP7.4□□□□□ -1.22
SCARB2-220ENST00000640076 ZCCHC18P0CG32 403 aa7.4□□□□□ -1.22
SCARB2-220ENST00000640076 EPXP11678 715 aa7.4□□□□□ -1.22
SCARB2-220ENST00000640076 CPMP14384 443 aa7.4□□□□□ -1.22
SCARB2-220ENST00000640076 NID1P14543 1247 aa7.4□□□□□ -1.22
SCARB2-220ENST00000640076 SLC6A2P23975 617 aa7.4□□□□□ -1.22
SCARB2-220ENST00000640076 ACVR2AP27037 513 aa7.4□□□□□ -1.22
SCARB2-220ENST00000640076 PPP2R1BP30154 601 aa7.4□□□□□ -1.22
SCARB2-220ENST00000640076 PRKAR1BP31321 381 aa7.4□□□□□ -1.22
SCARB2-220ENST00000640076 MPIP34949 423 aa7.4□□□□□ -1.22
SCARB2-220ENST00000640076 XKP51811 444 aa7.4□□□□□ -1.22
SCARB2-220ENST00000640076 NCBP2P52298 156 aaKnown RBP eCLIP7.4□□□□□ -1.22
SCARB2-220ENST00000640076 BLVRAP53004 296 aa7.4□□□□□ -1.22
SCARB2-220ENST00000640076 TUBA1BP68363 451 aa7.4□□□□□ -1.22
SCARB2-220ENST00000640076 BTG2P78543 158 aa7.4□□□□□ -1.22
SCARB2-220ENST00000640076 ID2Q02363 134 aa7.4□□□□□ -1.22
SCARB2-220ENST00000640076 DBPQ10586 325 aaPredicted RBP7.4□□□□□ -1.22
SCARB2-220ENST00000640076 HSPB3Q12988 150 aa7.4□□□□□ -1.22
SCARB2-220ENST00000640076 GAB1Q13480 694 aa7.4□□□□□ -1.22
SCARB2-220ENST00000640076 VWA2Q5GFL6 755 aa7.4□□□□□ -1.22
SCARB2-220ENST00000640076 TUBA1AQ71U36 451 aa7.4□□□□□ -1.22
SCARB2-220ENST00000640076 LRRC25Q8N386 305 aaPredicted RBP7.4□□□□□ -1.22
SCARB2-220ENST00000640076 POMGNT2Q8NAT1 580 aa7.4□□□□□ -1.22
SCARB2-220ENST00000640076 ZFP28Q8NHY6 868 aa7.4□□□□□ -1.22
SCARB2-220ENST00000640076 PSMA8Q8TAA3 256 aa7.4□□□□□ -1.22
SCARB2-220ENST00000640076 ADAMTS14Q8WXS8 1223 aa7.4□□□□□ -1.22
SCARB2-220ENST00000640076 CMTM3Q96MX0 182 aa7.4□□□□□ -1.22
SCARB2-220ENST00000640076 ANKRD27Q96NW4 1050 aa7.4□□□□□ -1.22
SCARB2-220ENST00000640076 NR1H4Q96RI1 486 aaPredicted RBP7.4□□□□□ -1.22
SCARB2-220ENST00000640076 SOX7Q9BT81 388 aa7.4□□□□□ -1.22
SCARB2-220ENST00000640076 TRIM4Q9C037 500 aa7.4□□□□□ -1.22
SCARB2-220ENST00000640076 SPAG4Q9NPE6 437 aa7.4□□□□□ -1.22
SCARB2-220ENST00000640076 MKKSQ9NPJ1 570 aaPredicted RBP7.4□□□□□ -1.22
SCARB2-220ENST00000640076 PRTFDC1Q9NRG1 225 aa7.4□□□□□ -1.22
SCARB2-220ENST00000640076 SELENONQ9NZV5 590 aa7.4□□□□□ -1.22
SCARB2-220ENST00000640076 VPS4AQ9UN37 437 aa7.4□□□□□ -1.22
SCARB2-220ENST00000640076 SATB2Q9UPW6 733 aa7.4□□□□□ -1.22
SCARB2-220ENST00000640076 CLDN16Q9Y5I7 305 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms