RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 NEK11Q8NG66 645 aa2.84□□□□□ -1.95
CCDC7-216ENST00000640058 RDH5Q92781 318 aa2.84□□□□□ -1.95
CCDC7-216ENST00000640058 TADA1Q96BN2 335 aa2.84□□□□□ -1.95
CCDC7-216ENST00000640058 NSMCE2Q96MF7 247 aa2.84□□□□□ -1.95
CCDC7-216ENST00000640058 ATG10Q9H0Y0 220 aa2.84□□□□□ -1.95
CCDC7-216ENST00000640058 C1orf21Q9H246 121 aa2.84□□□□□ -1.95
CCDC7-216ENST00000640058 HOMER3Q9NSC5 361 aa2.84□□□□□ -1.95
CCDC7-216ENST00000640058 DUS2Q9NX74 493 aaKnown RBP2.84□□□□□ -1.95
CCDC7-216ENST00000640058 EHFQ9NZC4 300 aa2.84□□□□□ -1.95
CCDC7-216ENST00000640058 ODF2LQ9ULJ1 636 aa2.84□□□□□ -1.95
CCDC7-216ENST00000640058 RAD54L2Q9Y4B4 1467 aa2.84□□□□□ -1.96
CCDC7-216ENST00000640058 KRT87PA6NCN2 255 aa2.83□□□□□ -1.96
CCDC7-216ENST00000640058 SCRG1O75711 98 aa2.83□□□□□ -1.96
CCDC7-216ENST00000640058 TGFAP01135 160 aa2.83□□□□□ -1.96
CCDC7-216ENST00000640058 STSP08842 583 aa2.83□□□□□ -1.96
CCDC7-216ENST00000640058 ETS1P14921 441 aa2.83□□□□□ -1.96
CCDC7-216ENST00000640058 CCNA2P20248 432 aa2.83□□□□□ -1.96
CCDC7-216ENST00000640058 MAPK3P27361 379 aaPredicted RBP2.83□□□□□ -1.96
CCDC7-216ENST00000640058 CD1BP29016 333 aa2.83□□□□□ -1.96
CCDC7-216ENST00000640058 NUMBP49757 651 aa2.83□□□□□ -1.96
CCDC7-216ENST00000640058 IL9RQ01113 521 aa2.83□□□□□ -1.96
CCDC7-216ENST00000640058 FUT7Q11130 342 aa2.83□□□□□ -1.96
CCDC7-216ENST00000640058 DPYSL3Q14195 570 aa2.83□□□□□ -1.96
CCDC7-216ENST00000640058 CCDC40Q4G0X9 1142 aa2.83□□□□□ -1.96
CCDC7-216ENST00000640058 ACSF3Q4G176 576 aaPredicted RBP2.83□□□□□ -1.96
CCDC7-216ENST00000640058 AGKQ53H12 422 aa2.83□□□□□ -1.96
CCDC7-216ENST00000640058 CCDC92Q53HC0 331 aaPredicted RBP2.83□□□□□ -1.96
CCDC7-216ENST00000640058 DCST2Q5T1A1 773 aa2.83□□□□□ -1.96
CCDC7-216ENST00000640058 OR6B2Q6IFH4 312 aa2.83□□□□□ -1.96
CCDC7-216ENST00000640058 PPP1R27Q86WC6 154 aa2.83□□□□□ -1.96
CCDC7-216ENST00000640058 ZNF786Q8N393 782 aa2.83□□□□□ -1.96
CCDC7-216ENST00000640058 RNF148Q8N7C7 305 aa2.83□□□□□ -1.96
CCDC7-216ENST00000640058 ZNF540Q8NDQ6 660 aa2.83□□□□□ -1.96
CCDC7-216ENST00000640058 OR56B1Q8NGI3 324 aa2.83□□□□□ -1.96
CCDC7-216ENST00000640058 KIR2DL5BQ8NHK3 375 aa2.83□□□□□ -1.96
CCDC7-216ENST00000640058 ZNF721Q8TF20 911 aa2.83□□□□□ -1.96
CCDC7-216ENST00000640058 FGGYQ96C11 551 aa2.83□□□□□ -1.96
CCDC7-216ENST00000640058 FAM111AQ96PZ2 611 aa2.83□□□□□ -1.96
CCDC7-216ENST00000640058 KCNK16Q96T55 309 aa2.83□□□□□ -1.96
CCDC7-216ENST00000640058 FAM124BQ9H5Z6 455 aaPredicted RBP2.83□□□□□ -1.96
CCDC7-216ENST00000640058 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.83□□□□□ -1.96
CCDC7-216ENST00000640058 IL20RAQ9UHF4 553 aa2.83□□□□□ -1.96
CCDC7-216ENST00000640058 WSB1Q9Y6I7 421 aa2.83□□□□□ -1.96
CCDC7-216ENST00000640058 IGKV2D-24A0A075B6R9 120 aa2.82□□□□□ -1.96
CCDC7-216ENST00000640058 TUBAL3A6NHL2 446 aa2.82□□□□□ -1.96
CCDC7-216ENST00000640058 TMEM110-MUSTN1A8MSY1 372 aa2.82□□□□□ -1.96
CCDC7-216ENST00000640058 ANKRD63C9JTQ0 380 aa2.82□□□□□ -1.96
CCDC7-216ENST00000640058 SSX5O60225 188 aa2.82□□□□□ -1.96
CCDC7-216ENST00000640058 FOXH1O75593 365 aa2.82□□□□□ -1.96
CCDC7-216ENST00000640058 MT-ATP6P00846 226 aa2.82□□□□□ -1.96
CCDC7-216ENST00000640058 ZCCHC18P0CG32 403 aa2.82□□□□□ -1.96
CCDC7-216ENST00000640058 CCDC192P0DO97 292 aa2.82□□□□□ -1.96
CCDC7-216ENST00000640058 GNSP15586 552 aa2.82□□□□□ -1.96
CCDC7-216ENST00000640058 CDH5P33151 784 aaPredicted RBP2.82□□□□□ -1.96
CCDC7-216ENST00000640058 CD86P42081 329 aa2.82□□□□□ -1.96
CCDC7-216ENST00000640058 MAGEA4P43358 317 aa2.82□□□□□ -1.96
CCDC7-216ENST00000640058 RPS10P46783 165 aaKnown RBP2.82□□□□□ -1.96
CCDC7-216ENST00000640058 PLOD1Q02809 727 aaPredicted RBP2.82□□□□□ -1.96
CCDC7-216ENST00000640058 SRYQ05066 204 aa2.82□□□□□ -1.96
CCDC7-216ENST00000640058 NME3Q13232 169 aa2.82□□□□□ -1.96
CCDC7-216ENST00000640058 PDIA5Q14554 519 aa2.82□□□□□ -1.96
CCDC7-216ENST00000640058 LRIT3Q3SXY7 679 aa2.82□□□□□ -1.96
CCDC7-216ENST00000640058 EOGTQ5NDL2 527 aa2.82□□□□□ -1.96
CCDC7-216ENST00000640058 METTL11BQ5VVY1 283 aa2.82□□□□□ -1.96
CCDC7-216ENST00000640058 RBM43Q6ZSC3 357 aaKnown RBP2.82□□□□□ -1.96
CCDC7-216ENST00000640058 TMEM110Q86TL2 294 aa2.82□□□□□ -1.96
CCDC7-216ENST00000640058 SYVN1Q86TM6 617 aa2.82□□□□□ -1.96
CCDC7-216ENST00000640058 LRRC17Q8N6Y2 441 aa2.82□□□□□ -1.96
CCDC7-216ENST00000640058 PHYHIPQ92561 330 aa2.82□□□□□ -1.96
CCDC7-216ENST00000640058 MCHR2Q969V1 340 aa2.82□□□□□ -1.96
CCDC7-216ENST00000640058 CCDC51Q96ER9 411 aa2.82□□□□□ -1.96
CCDC7-216ENST00000640058 TMEM80Q96HE8 168 aa2.82□□□□□ -1.96
CCDC7-216ENST00000640058 RTBDNQ9BSG5 229 aaPredicted RBP2.82□□□□□ -1.96
CCDC7-216ENST00000640058 CNOT2Q9NZN8 540 aaKnown RBP2.82□□□□□ -1.96
CCDC7-216ENST00000640058 CD274Q9NZQ7 290 aa2.82□□□□□ -1.96
CCDC7-216ENST00000640058 LCMT1Q9UIC8 334 aa2.82□□□□□ -1.96
CCDC7-216ENST00000640058 NAP1L2Q9ULW6 460 aaPredicted RBP2.82□□□□□ -1.96
CCDC7-216ENST00000640058 GRIN2DO15399 1336 aa2.82□□□□□ -1.96
CCDC7-216ENST00000640058 GTF3C1Q12789 2109 aa2.81□□□□□ -1.96
CCDC7-216ENST00000640058 A0A0J9YXY3 114 aa2.81□□□□□ -1.96
CCDC7-216ENST00000640058 SAGE2PA6NJ88 616 aa2.81□□□□□ -1.96
CCDC7-216ENST00000640058 C19orf81C9J6K1 198 aa2.81□□□□□ -1.96
CCDC7-216ENST00000640058 RASGRF2O14827 1237 aa2.81□□□□□ -1.96
CCDC7-216ENST00000640058 PPIHO43447 177 aaKnown RBP2.81□□□□□ -1.96
CCDC7-216ENST00000640058 TRAF3IP2O43734 574 aaPredicted RBP2.81□□□□□ -1.96
CCDC7-216ENST00000640058 CD55P08174 381 aa2.81□□□□□ -1.96
CCDC7-216ENST00000640058 PRDX6P30041 224 aa2.81□□□□□ -1.96
CCDC7-216ENST00000640058 ASMTP46597 345 aa2.81□□□□□ -1.96
CCDC7-216ENST00000640058 CAMLGP49069 296 aa2.81□□□□□ -1.96
CCDC7-216ENST00000640058 MYBPC1Q00872 1141 aa2.81□□□□□ -1.96
CCDC7-216ENST00000640058 SNX1Q13596 522 aa2.81□□□□□ -1.96
CCDC7-216ENST00000640058 GPNMBQ14956 572 aa2.81□□□□□ -1.96
CCDC7-216ENST00000640058 TEX44Q53QW1 395 aa2.81□□□□□ -1.96
CCDC7-216ENST00000640058 C12orf60Q5U649 245 aa2.81□□□□□ -1.96
CCDC7-216ENST00000640058 IL23RQ5VWK5 629 aa2.81□□□□□ -1.96
CCDC7-216ENST00000640058 ASPHD2Q6ICH7 369 aa2.81□□□□□ -1.96
CCDC7-216ENST00000640058 ZNF561Q8N587 486 aa2.81□□□□□ -1.96
CCDC7-216ENST00000640058 FAM71CQ8NEG0 241 aa2.81□□□□□ -1.96
CCDC7-216ENST00000640058 TAF4BQ92750 862 aa2.81□□□□□ -1.96
CCDC7-216ENST00000640058 ART4Q93070 314 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms