RNA–Protein interactions for RNA: ENST00000638883.1

NECAP1-213, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,940 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-213ENST00000638883 ZNF546Q86UE3 836 aa6.69□□□□□ -1.34
NECAP1-213ENST00000638883 NANOGP1Q8N7R0 232 aa6.69□□□□□ -1.34
NECAP1-213ENST00000638883 B3GALNT2Q8NCR0 500 aa6.69□□□□□ -1.34
NECAP1-213ENST00000638883 OR7G2Q8NG99 324 aa6.69□□□□□ -1.34
NECAP1-213ENST00000638883 GCDHQ92947 438 aaPredicted RBP6.69□□□□□ -1.34
NECAP1-213ENST00000638883 C14orf144Q96I85 54 aa6.69□□□□□ -1.34
NECAP1-213ENST00000638883 HHIPQ96QV1 700 aa6.69□□□□□ -1.34
NECAP1-213ENST00000638883 GABARAPL3Q9BY60 117 aa6.69□□□□□ -1.34
NECAP1-213ENST00000638883 AGO3Q9H9G7 860 aaKnown RBP6.69□□□□□ -1.34
NECAP1-213ENST00000638883 GAR1Q9NY12 217 aaKnown RBP6.69□□□□□ -1.34
NECAP1-213ENST00000638883 RHCGQ9UBD6 479 aa6.69□□□□□ -1.34
NECAP1-213ENST00000638883 MTCL1Q9Y4B5 1905 aaKnown RBP6.69□□□□□ -1.34
NECAP1-213ENST00000638883 TRAPPC13A5PLN9 417 aa6.69□□□□□ -1.34
NECAP1-213ENST00000638883 GABRR3A8MPY1 467 aa6.69□□□□□ -1.34
NECAP1-213ENST00000638883 F5H5P2 479 aa6.69□□□□□ -1.34
NECAP1-213ENST00000638883 AP4M1O00189 453 aa6.69□□□□□ -1.34
NECAP1-213ENST00000638883 FADS1O60427 444 aa6.69□□□□□ -1.34
NECAP1-213ENST00000638883 KERAO60938 352 aa6.69□□□□□ -1.34
NECAP1-213ENST00000638883 REM1O75628 298 aa6.69□□□□□ -1.34
NECAP1-213ENST00000638883 OTCP00480 354 aa6.69□□□□□ -1.34
NECAP1-213ENST00000638883 F2P00734 622 aa6.69□□□□□ -1.34
NECAP1-213ENST00000638883 SNRNP70P08621 437 aaKnown RBP6.69□□□□□ -1.34
NECAP1-213ENST00000638883 BCKDHAP12694 445 aa6.69□□□□□ -1.34
NECAP1-213ENST00000638883 HOXB8P17481 243 aaPredicted RBP6.69□□□□□ -1.34
NECAP1-213ENST00000638883 CTPS1P17812 591 aa6.69□□□□□ -1.34
NECAP1-213ENST00000638883 CD86P42081 329 aa6.69□□□□□ -1.34
NECAP1-213ENST00000638883 OMPP47874 163 aa6.69□□□□□ -1.34
NECAP1-213ENST00000638883 SORDQ00796 357 aa6.69□□□□□ -1.34
NECAP1-213ENST00000638883 MELKQ14680 651 aa6.69□□□□□ -1.34
NECAP1-213ENST00000638883 MARCH8Q5T0T0 291 aa6.69□□□□□ -1.34
NECAP1-213ENST00000638883 ADAMTSL4Q6UY14 1074 aa6.69□□□□□ -1.34
NECAP1-213ENST00000638883 DPPA4Q7L190 304 aa6.69□□□□□ -1.34
NECAP1-213ENST00000638883 CXXC5Q7LFL8 322 aaKnown RBP6.69□□□□□ -1.34
NECAP1-213ENST00000638883 DEFB128Q7Z7B8 93 aa6.69□□□□□ -1.34
NECAP1-213ENST00000638883 PRSS58Q8IYP2 241 aa6.69□□□□□ -1.34
NECAP1-213ENST00000638883 ADGRG2Q8IZP9 1017 aa6.69□□□□□ -1.34
NECAP1-213ENST00000638883 CHST14Q8NCH0 376 aa6.69□□□□□ -1.34
NECAP1-213ENST00000638883 SETD7Q8WTS6 366 aaKnown RBP6.69□□□□□ -1.34
NECAP1-213ENST00000638883 HSPA12BQ96MM6 686 aa6.69□□□□□ -1.34
NECAP1-213ENST00000638883 OSMRQ99650 979 aa6.69□□□□□ -1.34
NECAP1-213ENST00000638883 GPR21Q99679 349 aa6.69□□□□□ -1.34
NECAP1-213ENST00000638883 ZNF559Q9BR84 538 aa6.69□□□□□ -1.34
NECAP1-213ENST00000638883 FDXACB1Q9BRP7 624 aaPredicted RBP6.69□□□□□ -1.34
NECAP1-213ENST00000638883 SUV39H2Q9H5I1 410 aa6.69□□□□□ -1.34
NECAP1-213ENST00000638883 DDIT4Q9NX09 232 aa6.69□□□□□ -1.34
NECAP1-213ENST00000638883 RUVBL1Q9Y265 456 aaKnown RBP6.69□□□□□ -1.34
NECAP1-213ENST00000638883 SMAD9O15198 467 aaKnown RBP6.68□□□□□ -1.34
NECAP1-213ENST00000638883 HSPA12AO43301 675 aa6.68□□□□□ -1.34
NECAP1-213ENST00000638883 HPP00738 406 aa6.68□□□□□ -1.34
NECAP1-213ENST00000638883 IFNA10P01566 189 aa6.68□□□□□ -1.34
NECAP1-213ENST00000638883 HLA-DQB1P01920 261 aa6.68□□□□□ -1.34
NECAP1-213ENST00000638883 TYRP14679 529 aa6.68□□□□□ -1.34
NECAP1-213ENST00000638883 BPIP17213 487 aa6.68□□□□□ -1.34
NECAP1-213ENST00000638883 PSMB1P20618 241 aaKnown RBP6.68□□□□□ -1.34
NECAP1-213ENST00000638883 SDHAP31040 664 aa6.68□□□□□ -1.34
NECAP1-213ENST00000638883 CASP9P55211 416 aa6.68□□□□□ -1.34
NECAP1-213ENST00000638883 ACTR1AP61163 376 aa6.68□□□□□ -1.34
NECAP1-213ENST00000638883 RPS14P62263 151 aaKnown RBP6.68□□□□□ -1.34
NECAP1-213ENST00000638883 DDX39BQ13838 428 aaKnown RBP6.68□□□□□ -1.34
NECAP1-213ENST00000638883 PPA1Q15181 289 aa6.68□□□□□ -1.34
NECAP1-213ENST00000638883 MICBQ29980 383 aa6.68□□□□□ -1.34
NECAP1-213ENST00000638883 SPRYD7Q5W111 196 aa6.68□□□□□ -1.34
NECAP1-213ENST00000638883 HEPHL1Q6MZM0 1159 aa6.68□□□□□ -1.34
NECAP1-213ENST00000638883 METTL7BQ6UX53 244 aa6.68□□□□□ -1.34
NECAP1-213ENST00000638883 Q6ZSR9 355 aa6.68□□□□□ -1.34
NECAP1-213ENST00000638883 POMGNT2Q8NAT1 580 aa6.68□□□□□ -1.34
NECAP1-213ENST00000638883 RBM18Q96H35 190 aaKnown RBP6.68□□□□□ -1.34
NECAP1-213ENST00000638883 LRFN5Q96NI6 719 aa6.68□□□□□ -1.34
NECAP1-213ENST00000638883 INPP5KQ9BT40 448 aa6.68□□□□□ -1.34
NECAP1-213ENST00000638883 ZNF350Q9GZX5 532 aa6.68□□□□□ -1.34
NECAP1-213ENST00000638883 SPATC1LQ9H0A9 340 aa6.68□□□□□ -1.34
NECAP1-213ENST00000638883 METTL9Q9H1A3 318 aa6.68□□□□□ -1.34
NECAP1-213ENST00000638883 POLR2J3Q9H1A7 115 aaKnown RBP6.68□□□□□ -1.34
NECAP1-213ENST00000638883 WNT5BQ9H1J7 359 aa6.68□□□□□ -1.34
NECAP1-213ENST00000638883 IPPKQ9H8X2 491 aa6.68□□□□□ -1.34
NECAP1-213ENST00000638883 KCNK12Q9HB15 430 aa6.68□□□□□ -1.34
NECAP1-213ENST00000638883 SLC52A3Q9NQ40 469 aa6.68□□□□□ -1.34
NECAP1-213ENST00000638883 FAM86C1Q9NVL1 165 aa6.68□□□□□ -1.34
NECAP1-213ENST00000638883 TMEM248Q9NWD8 314 aa6.68□□□□□ -1.34
NECAP1-213ENST00000638883 SLC25A37Q9NYZ2 338 aa6.68□□□□□ -1.34
NECAP1-213ENST00000638883 PCDHB10Q9UN67 800 aa6.68□□□□□ -1.34
NECAP1-213ENST00000638883 NUP210Q8TEM1 1887 aaPredicted RBP6.68□□□□□ -1.34
NECAP1-213ENST00000638883 TRBV23OR9-2A0A075B6M9 112 aa6.68□□□□□ -1.34
NECAP1-213ENST00000638883 A0A1W2PRB8 838 aa6.68□□□□□ -1.34
NECAP1-213ENST00000638883 MAGEB17A8MXT2 336 aa6.68□□□□□ -1.34
NECAP1-213ENST00000638883 E7EQ34 232 aa6.68□□□□□ -1.34
NECAP1-213ENST00000638883 CXCL11O14625 94 aa6.68□□□□□ -1.34
NECAP1-213ENST00000638883 GOSR2O14653 212 aa6.68□□□□□ -1.34
NECAP1-213ENST00000638883 LRRTM2O43300 516 aa6.68□□□□□ -1.34
NECAP1-213ENST00000638883 CHST10O43529 356 aa6.68□□□□□ -1.34
NECAP1-213ENST00000638883 OR2T1O43869 369 aa6.68□□□□□ -1.34
NECAP1-213ENST00000638883 UBXN7O94888 489 aa6.68□□□□□ -1.34
NECAP1-213ENST00000638883 EFNA5P52803 228 aa6.68□□□□□ -1.34
NECAP1-213ENST00000638883 RABGGTBP53611 331 aa6.68□□□□□ -1.34
NECAP1-213ENST00000638883 WNT3AP56704 352 aa6.68□□□□□ -1.34
NECAP1-213ENST00000638883 ECH1Q13011 328 aa6.68□□□□□ -1.34
NECAP1-213ENST00000638883 DYRK1AQ13627 763 aa6.68□□□□□ -1.34
NECAP1-213ENST00000638883 KIAA0141Q14154 515 aaPredicted RBP6.68□□□□□ -1.34
NECAP1-213ENST00000638883 TAF13Q15543 124 aa6.68□□□□□ -1.34
NECAP1-213ENST00000638883 CPSF6Q16630 551 aaKnown RBP eCLIP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms