RNA–Protein interactions for RNA: ENST00000638120.1

CACNA1D-228, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 2 BASIC

Gene CACNA1D, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-228ENST00000638120 SLC46A1Q96NT5 459 aa11.33□□□□□ -0.6
CACNA1D-228ENST00000638120 SIGLEC11Q96RL6 698 aa11.33□□□□□ -0.6
CACNA1D-228ENST00000638120 TSC22D3Q99576 134 aa11.33□□□□□ -0.6
CACNA1D-228ENST00000638120 GPA33Q99795 319 aa11.33□□□□□ -0.6
CACNA1D-228ENST00000638120 RHNO1Q9BSD3 238 aa11.33□□□□□ -0.6
CACNA1D-228ENST00000638120 GTPBP2Q9BX10 602 aaKnown RBP11.33□□□□□ -0.6
CACNA1D-228ENST00000638120 SLC7A5P2Q9GIP4 190 aa11.33□□□□□ -0.6
CACNA1D-228ENST00000638120 C14orf105Q9NVL8 296 aa11.33□□□□□ -0.6
CACNA1D-228ENST00000638120 ERVK-18Q9QC07 812 aa11.33□□□□□ -0.6
CACNA1D-228ENST00000638120 CTSFQ9UBX1 484 aa11.33□□□□□ -0.6
CACNA1D-228ENST00000638120 OR10H1Q9Y4A9 318 aa11.33□□□□□ -0.6
CACNA1D-228ENST00000638120 M0R129 80 aa11.32□□□□□ -0.6
CACNA1D-228ENST00000638120 DDAH2O95865 285 aa11.32□□□□□ -0.6
CACNA1D-228ENST00000638120 IGKV3-11P04433 115 aa11.32□□□□□ -0.6
CACNA1D-228ENST00000638120 IGFBP1P08833 259 aaPredicted RBP11.32□□□□□ -0.6
CACNA1D-228ENST00000638120 GSTT1P30711 240 aa11.32□□□□□ -0.6
CACNA1D-228ENST00000638120 RORAP35398 523 aa11.32□□□□□ -0.6
CACNA1D-228ENST00000638120 OMPP47874 163 aa11.32□□□□□ -0.6
CACNA1D-228ENST00000638120 DUSP3P51452 185 aaPredicted RBP11.32□□□□□ -0.6
CACNA1D-228ENST00000638120 ATP12AP54707 1039 aa11.32□□□□□ -0.6
CACNA1D-228ENST00000638120 TSPAN31Q12999 210 aa11.32□□□□□ -0.6
CACNA1D-228ENST00000638120 LPAL2Q16609 132 aa11.32□□□□□ -0.6
CACNA1D-228ENST00000638120 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.32□□□□□ -0.6
CACNA1D-228ENST00000638120 GTF2IRD2BQ6EKJ0 949 aa11.32□□□□□ -0.6
CACNA1D-228ENST00000638120 RRM2BQ7LG56 351 aa11.32□□□□□ -0.6
CACNA1D-228ENST00000638120 GTF2IRD2Q86UP8 949 aa11.32□□□□□ -0.6
CACNA1D-228ENST00000638120 ZNF614Q8N883 585 aa11.32□□□□□ -0.6
CACNA1D-228ENST00000638120 BCORP1Q8N888 145 aa11.32□□□□□ -0.6
CACNA1D-228ENST00000638120 ZNF321PQ8N8H1 164 aa11.32□□□□□ -0.6
CACNA1D-228ENST00000638120 OR13F1Q8NGS4 319 aa11.32□□□□□ -0.6
CACNA1D-228ENST00000638120 PIGXQ8TBF5 258 aa11.32□□□□□ -0.6
CACNA1D-228ENST00000638120 SLC2A12Q8TD20 617 aa11.32□□□□□ -0.6
CACNA1D-228ENST00000638120 ZNF721Q8TF20 911 aa11.32□□□□□ -0.6
CACNA1D-228ENST00000638120 NMD3Q96D46 503 aaKnown RBP11.32□□□□□ -0.6
CACNA1D-228ENST00000638120 TGIF2Q9GZN2 237 aa11.32□□□□□ -0.6
CACNA1D-228ENST00000638120 VN1R1Q9GZP7 353 aa11.32□□□□□ -0.6
CACNA1D-228ENST00000638120 CCDC90BQ9GZT6 254 aa11.32□□□□□ -0.6
CACNA1D-228ENST00000638120 C11orf16Q9NQ32 467 aa11.32□□□□□ -0.6
CACNA1D-228ENST00000638120 SLC22A11Q9NSA0 550 aa11.32□□□□□ -0.6
CACNA1D-228ENST00000638120 RARRES3Q9UL19 164 aa11.32□□□□□ -0.6
CACNA1D-228ENST00000638120 SLC7A7Q9UM01 511 aa11.32□□□□□ -0.6
CACNA1D-228ENST00000638120 CFL2Q9Y281 166 aa11.32□□□□□ -0.6
CACNA1D-228ENST00000638120 CLCA3PQ9Y6N3 262 aa11.32□□□□□ -0.6
CACNA1D-228ENST00000638120 COMMD3-BMI1R4GMX3 469 aa11.32□□□□□ -0.6
CACNA1D-228ENST00000638120 MUC3AQ02505 3323 aa11.32□□□□□ -0.6
CACNA1D-228ENST00000638120 IGLV3-12A0A075B6K2 115 aa11.32□□□□□ -0.6
CACNA1D-228ENST00000638120 SYNDIG1LA6NDD5 238 aa11.32□□□□□ -0.6
CACNA1D-228ENST00000638120 A8MUA0 341 aa11.32□□□□□ -0.6
CACNA1D-228ENST00000638120 ZNF701M0R085 212 aaPredicted RBP11.32□□□□□ -0.6
CACNA1D-228ENST00000638120 POLR1CO15160 346 aaPredicted RBP11.32□□□□□ -0.6
CACNA1D-228ENST00000638120 RGS10O43665 173 aa11.32□□□□□ -0.6
CACNA1D-228ENST00000638120 SEC14L2O76054 403 aa11.32□□□□□ -0.6
CACNA1D-228ENST00000638120 TIAF1O95411 115 aa11.32□□□□□ -0.6
CACNA1D-228ENST00000638120 NTN1O95631 604 aa11.32□□□□□ -0.6
CACNA1D-228ENST00000638120 ITIH1P19827 911 aa11.32□□□□□ -0.6
CACNA1D-228ENST00000638120 PPICP45877 212 aa11.32□□□□□ -0.6
CACNA1D-228ENST00000638120 RNF144AP50876 292 aaPredicted RBP11.32□□□□□ -0.6
CACNA1D-228ENST00000638120 FGFBP1Q14512 234 aa11.32□□□□□ -0.6
CACNA1D-228ENST00000638120 OR1Q1Q15612 314 aa11.32□□□□□ -0.6
CACNA1D-228ENST00000638120 NSDHLQ15738 373 aa11.32□□□□□ -0.6
CACNA1D-228ENST00000638120 ZSWIM7Q19AV6 140 aa11.32□□□□□ -0.6
CACNA1D-228ENST00000638120 MBOAT2Q6ZWT7 520 aa11.32□□□□□ -0.6
CACNA1D-228ENST00000638120 PRSS48Q7RTY5 328 aa11.32□□□□□ -0.6
CACNA1D-228ENST00000638120 PRICKLE2Q7Z3G6 844 aa11.32□□□□□ -0.6
CACNA1D-228ENST00000638120 CLVS1Q8IUQ0 354 aaPredicted RBP11.32□□□□□ -0.6
CACNA1D-228ENST00000638120 SLITRK4Q8IW52 837 aa11.32□□□□□ -0.6
CACNA1D-228ENST00000638120 PRSS58Q8IYP2 241 aa11.32□□□□□ -0.6
CACNA1D-228ENST00000638120 PLPP5Q8NEB5 264 aa11.32□□□□□ -0.6
CACNA1D-228ENST00000638120 OR14A16Q8NHC5 309 aa11.32□□□□□ -0.6
CACNA1D-228ENST00000638120 TMEM255BQ8WV15 326 aa11.32□□□□□ -0.6
CACNA1D-228ENST00000638120 CNOT9Q92600 299 aaKnown RBP11.32□□□□□ -0.6
CACNA1D-228ENST00000638120 SLC35B4Q969S0 331 aa11.32□□□□□ -0.6
CACNA1D-228ENST00000638120 MUL1Q969V5 352 aa11.32□□□□□ -0.6
CACNA1D-228ENST00000638120 ART5Q96L15 291 aa11.32□□□□□ -0.6
CACNA1D-228ENST00000638120 GFM1Q96RP9 751 aaKnown RBP11.32□□□□□ -0.6
CACNA1D-228ENST00000638120 PRSS27Q9BQR3 290 aa11.32□□□□□ -0.6
CACNA1D-228ENST00000638120 OR8D2Q9GZM6 311 aa11.32□□□□□ -0.6
CACNA1D-228ENST00000638120 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.32□□□□□ -0.6
CACNA1D-228ENST00000638120 FKBP14Q9NWM8 211 aa11.32□□□□□ -0.6
CACNA1D-228ENST00000638120 DNAJB12Q9NXW2 375 aaKnown RBP11.32□□□□□ -0.6
CACNA1D-228ENST00000638120 PTTG2Q9NZH5 202 aa11.32□□□□□ -0.6
CACNA1D-228ENST00000638120 PSORS1C1Q9UIG5 152 aa11.32□□□□□ -0.6
CACNA1D-228ENST00000638120 MKL2Q9ULH7 1088 aa11.32□□□□□ -0.6
CACNA1D-228ENST00000638120 SEC16AO15027 2179 aa11.31□□□□□ -0.6
CACNA1D-228ENST00000638120 D6RAR5 112 aa11.31□□□□□ -0.6
CACNA1D-228ENST00000638120 NTN3O00634 580 aaPredicted RBP11.31□□□□□ -0.6
CACNA1D-228ENST00000638120 SCRG1O75711 98 aa11.31□□□□□ -0.6
CACNA1D-228ENST00000638120 LYPD3O95274 346 aa11.31□□□□□ -0.6
CACNA1D-228ENST00000638120 MT-ND2P03891 347 aa11.31□□□□□ -0.6
CACNA1D-228ENST00000638120 PAX7P23759 505 aa11.31□□□□□ -0.6
CACNA1D-228ENST00000638120 FPR3P25089 353 aa11.31□□□□□ -0.6
CACNA1D-228ENST00000638120 MPLP40238 635 aa11.31□□□□□ -0.6
CACNA1D-228ENST00000638120 EMX1Q04741 257 aaPredicted RBP11.31□□□□□ -0.6
CACNA1D-228ENST00000638120 TUBA3CQ13748 450 aa11.31□□□□□ -0.6
CACNA1D-228ENST00000638120 PWWP2BQ6NUJ5 590 aa11.31□□□□□ -0.6
CACNA1D-228ENST00000638120 ZNF613Q6PF04 617 aa11.31□□□□□ -0.6
CACNA1D-228ENST00000638120 RASSF6Q6ZTQ3 369 aa11.31□□□□□ -0.6
CACNA1D-228ENST00000638120 PTCHD4Q6ZW05 846 aa11.31□□□□□ -0.6
CACNA1D-228ENST00000638120 AHSA2Q719I0 299 aa11.31□□□□□ -0.6
CACNA1D-228ENST00000638120 LAPTM4BQ86VI4 370 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms