RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 BBOX1O75936 387 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 FLOT1O75955 427 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 SIX3O95343 332 aaPredicted RBP0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 IGHG1P01857 330 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 SFTPBP07988 381 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 SLC35E2P0CK97 266 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 CCDC166P0CW27 439 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 GHRP10912 638 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 KRT3P12035 628 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 ATP6V1B1P15313 513 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 UGT1A6P19224 532 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 IDSP22304 550 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 GLRA1P23415 457 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 UCP1P25874 307 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 RPA1P27694 616 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 CHRNA3P32297 505 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 CA8P35219 290 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 CTNNA1P35221 906 aaKnown RBP0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 DRD3P35462 400 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 TCF7P36402 384 aaPredicted RBP0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 NSFP46459 744 aaKnown RBP0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 OR3A4PP47883 348 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 TNFSF10P50591 281 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 ARHGDIBP52566 201 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 NDST1P52848 882 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 SLC25A1P53007 311 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 HAND2P61296 217 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 LYZP61626 148 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 TIMM10P62072 90 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 RPS4XP62701 263 aaKnown RBP0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 PPIAP62937 165 aaKnown RBP0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 ASIC1P78348 528 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 IGLV3-21P80748 117 aaPredicted RBP0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 CDKL1Q00532 357 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 NDPQ00604 133 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 POU5F1Q01860 360 aaKnown RBP0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 CNTN2Q02246 1040 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 GFPT1Q06210 699 aaPredicted RBP0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 PPP1R8Q12972 351 aaKnown RBP0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 NPRL3Q12980 569 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 SLMAPQ14BN4 828 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 TGIF1Q15583 401 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 OR1C1Q15619 314 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 LTB4RQ15722 352 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 STX1AQ16623 288 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 MEP1BQ16820 701 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 CCDC57Q2TAC2 916 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 ANKRD55Q3KP44 614 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 RABL6Q3YEC7 729 aaPredicted RBP0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 USH1GQ495M9 461 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 GPAT3Q53EU6 434 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 MPPE1Q53F39 396 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 TCEAL5Q5H9L2 206 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 GLRA4Q5JXX5 417 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 ZNF658Q5TYW1 1059 aaPredicted RBP0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 C1orf189Q5VU69 101 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 RSBN1Q5VWQ0 802 aaPredicted RBP0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 RNLSQ5VYX0 342 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 FAM219BQ5XKK7 198 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 OLFML2AQ68BL7 652 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 KCTD11Q693B1 232 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 BAIAP2L2Q6UXY1 529 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 ZNF600Q6ZNG1 722 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 LINC00696Q6ZRV3 163 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 CYP4V2Q6ZWL3 525 aaPredicted RBP0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 ARMCX2Q7L311 632 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 ASCL5Q7RTU5 278 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 TSEN54Q7Z6J9 526 aaKnown RBP0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 ERICH1Q86X53 443 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 PHC2Q8IXK0 858 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 MYOCDQ8IZQ8 938 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 PYROXD2Q8N2H3 581 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 CADM2Q8N3J6 435 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 C10orf53Q8N6V4 93 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 ZNRF1Q8ND25 227 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 STKLD1Q8NE28 680 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 CHDHQ8NE62 594 aaPredicted RBP0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 LPCAT1Q8NF37 534 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 VN1R2Q8NFZ6 395 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 OR4L1Q8NH43 312 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 OR4A16Q8NH70 328 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 RFESDQ8TAC1 157 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 GOLGA5Q8TBA6 731 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 SAP25Q8TEE9 199 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 PIBF1Q8WXW3 757 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 FRAT1Q92837 279 aaPredicted RBP0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 MARC2Q969Z3 335 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 TADA1Q96BN2 335 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 SNRNP40Q96DI7 357 aaKnown RBP0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 PHYHIPLQ96FC7 376 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 VMP1Q96GC9 406 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 B3GALT6Q96L58 329 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 CASD1Q96PB1 797 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 S1PR3Q99500 378 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 FAM213AQ9BRX8 229 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 DESI2Q9BSY9 194 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 APOOQ9BUR5 198 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 CACNG6Q9BXT2 260 aa0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 TEX13AQ9BXU3 409 aaPredicted RBP0.83□□□□□ -2.28
SMARCB1-209ENST00000635578 FUT8Q9BYC5 575 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms