RNA–Protein interactions for RNA: ENST00000634178.1

TRAPPC9-216, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2

Gene TRAPPC9, Length 455 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-216ENST00000634178 NUP37Q8NFH4 326 aa4.27□□□□□ -1.73
TRAPPC9-216ENST00000634178 IPMKQ8NFU5 416 aa4.27□□□□□ -1.73
TRAPPC9-216ENST00000634178 WDR36Q8NI36 951 aaKnown RBP4.27□□□□□ -1.73
TRAPPC9-216ENST00000634178 FAM76AQ8TAV0 307 aa4.27□□□□□ -1.73
TRAPPC9-216ENST00000634178 CCDC51Q96ER9 411 aa4.27□□□□□ -1.73
TRAPPC9-216ENST00000634178 DUX3Q96PT4 197 aa4.27□□□□□ -1.73
TRAPPC9-216ENST00000634178 OVOL2Q9BRP0 275 aa4.27□□□□□ -1.73
TRAPPC9-216ENST00000634178 EGLN1Q9GZT9 426 aa4.27□□□□□ -1.73
TRAPPC9-216ENST00000634178 WDR76Q9H967 626 aa4.27□□□□□ -1.73
TRAPPC9-216ENST00000634178 P2RX2Q9UBL9 471 aa4.27□□□□□ -1.73
TRAPPC9-216ENST00000634178 EXTL2Q9UBQ6 330 aa4.27□□□□□ -1.73
TRAPPC9-216ENST00000634178 BAIAP2L1Q9UHR4 511 aa4.27□□□□□ -1.73
TRAPPC9-216ENST00000634178 ATP6V1HQ9UI12 483 aa4.27□□□□□ -1.73
TRAPPC9-216ENST00000634178 SNX6Q9UNH7 406 aa4.27□□□□□ -1.73
TRAPPC9-216ENST00000634178 SLC9A8Q9Y2E8 581 aa4.27□□□□□ -1.73
TRAPPC9-216ENST00000634178 MRPS7Q9Y2R9 242 aaKnown RBP4.27□□□□□ -1.73
TRAPPC9-216ENST00000634178 ATG4BQ9Y4P1 393 aa4.27□□□□□ -1.73
TRAPPC9-216ENST00000634178 ANGPTL3Q9Y5C1 460 aa4.27□□□□□ -1.73
TRAPPC9-216ENST00000634178 NAV2Q8IVL1 2488 aa4.27□□□□□ -1.73
TRAPPC9-216ENST00000634178 FREM2Q5SZK8 3169 aa4.26□□□□□ -1.73
TRAPPC9-216ENST00000634178 DOCK8Q8NF50 2099 aa4.26□□□□□ -1.73
TRAPPC9-216ENST00000634178 RALGAPA1Q6GYQ0 2036 aa4.26□□□□□ -1.73
TRAPPC9-216ENST00000634178 LAMA1P25391 3075 aa4.26□□□□□ -1.73
TRAPPC9-216ENST00000634178 LAMA5O15230 3695 aa4.26□□□□□ -1.73
TRAPPC9-216ENST00000634178 LOC105371242A0A075B767 164 aa4.26□□□□□ -1.73
TRAPPC9-216ENST00000634178 NPIPA5A0A0B4J1W7 369 aa4.26□□□□□ -1.73
TRAPPC9-216ENST00000634178 NPIPA5E9PKD4 350 aa4.26□□□□□ -1.73
TRAPPC9-216ENST00000634178 NEDD8-MDP1E9PL57 170 aa4.26□□□□□ -1.73
TRAPPC9-216ENST00000634178 H0YCG3 227 aa4.26□□□□□ -1.73
TRAPPC9-216ENST00000634178 K7EQD1 137 aa4.26□□□□□ -1.73
TRAPPC9-216ENST00000634178 GMFGO60234 142 aa4.26□□□□□ -1.73
TRAPPC9-216ENST00000634178 STK17BO94768 372 aa4.26□□□□□ -1.73
TRAPPC9-216ENST00000634178 RHOBTB1O94844 696 aa4.26□□□□□ -1.73
TRAPPC9-216ENST00000634178 CHRNA1P02708 482 aa4.26□□□□□ -1.73
TRAPPC9-216ENST00000634178 FHP07954 510 aa4.26□□□□□ -1.73
TRAPPC9-216ENST00000634178 SLC35G4P0C7Q5 338 aa4.26□□□□□ -1.73
TRAPPC9-216ENST00000634178 PATE4P0C8F1 98 aa4.26□□□□□ -1.73
TRAPPC9-216ENST00000634178 ZNF286BP0CG31 522 aa4.26□□□□□ -1.73
TRAPPC9-216ENST00000634178 SMIM10L2AP0DMW4 78 aa4.26□□□□□ -1.73
TRAPPC9-216ENST00000634178 SMIM10L2BP0DMW5 78 aa4.26□□□□□ -1.73
TRAPPC9-216ENST00000634178 PRG2P13727 222 aa4.26□□□□□ -1.73
TRAPPC9-216ENST00000634178 PAICSP22234 425 aaKnown RBP4.26□□□□□ -1.73
TRAPPC9-216ENST00000634178 PSMA5P28066 241 aa4.26□□□□□ -1.73
TRAPPC9-216ENST00000634178 MMP12P39900 470 aa4.26□□□□□ -1.73
TRAPPC9-216ENST00000634178 KRTAP10-9P60411 292 aa4.26□□□□□ -1.73
TRAPPC9-216ENST00000634178 RPL27P61353 136 aaKnown RBP4.26□□□□□ -1.73
TRAPPC9-216ENST00000634178 TRA2BP62995 288 aaKnown RBP4.26□□□□□ -1.73
TRAPPC9-216ENST00000634178 IL9RQ01113 521 aa4.26□□□□□ -1.73
TRAPPC9-216ENST00000634178 FUT7Q11130 342 aa4.26□□□□□ -1.73
TRAPPC9-216ENST00000634178 HKDC1Q2TB90 917 aa4.26□□□□□ -1.73
TRAPPC9-216ENST00000634178 ADPRMQ3LIE5 342 aa4.26□□□□□ -1.73
TRAPPC9-216ENST00000634178 ZNF311Q5JNZ3 666 aa4.26□□□□□ -1.73
TRAPPC9-216ENST00000634178 CELF3Q5SZQ8 465 aaKnown RBP4.26□□□□□ -1.73
TRAPPC9-216ENST00000634178 DCAF12Q5T6F0 453 aa4.26□□□□□ -1.73
TRAPPC9-216ENST00000634178 BSPRYQ5W0U4 402 aa4.26□□□□□ -1.73
TRAPPC9-216ENST00000634178 RHBDD2Q6NTF9 364 aa4.26□□□□□ -1.73
TRAPPC9-216ENST00000634178 STEAP1BQ6NZ63 245 aa4.26□□□□□ -1.73
TRAPPC9-216ENST00000634178 C18orf65Q6ZTR6 163 aa4.26□□□□□ -1.73
TRAPPC9-216ENST00000634178 SPPL2AQ8TCT8 520 aa4.26□□□□□ -1.73
TRAPPC9-216ENST00000634178 PCNPQ8WW12 178 aaKnown RBP4.26□□□□□ -1.73
TRAPPC9-216ENST00000634178 C19orf43Q9BQ61 176 aa4.26□□□□□ -1.73
TRAPPC9-216ENST00000634178 SYT15Q9BQS2 421 aa4.26□□□□□ -1.73
TRAPPC9-216ENST00000634178 CRACR2AQ9BSW2 395 aa4.26□□□□□ -1.73
TRAPPC9-216ENST00000634178 RBM24Q9BX46 236 aaKnown RBP4.26□□□□□ -1.73
TRAPPC9-216ENST00000634178 CXXC4Q9H2H0 198 aa4.26□□□□□ -1.73
TRAPPC9-216ENST00000634178 SP140LQ9H930 580 aa4.26□□□□□ -1.73
TRAPPC9-216ENST00000634178 PLEKHA3Q9HB20 300 aa4.26□□□□□ -1.73
TRAPPC9-216ENST00000634178 CIDEBQ9UHD4 219 aa4.26□□□□□ -1.73
TRAPPC9-216ENST00000634178 MRPS18CQ9Y3D5 142 aaKnown RBP4.26□□□□□ -1.73
TRAPPC9-216ENST00000634178 FKBP7Q9Y680 259 aa4.26□□□□□ -1.73
TRAPPC9-216ENST00000634178 GREB1Q4ZG55 1949 aa4.25□□□□□ -1.73
TRAPPC9-216ENST00000634178 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.25□□□□□ -1.73
TRAPPC9-216ENST00000634178 LOC390937A0A1W2PQ73 354 aa4.25□□□□□ -1.73
TRAPPC9-216ENST00000634178 BCLAF3A2AJT9 711 aaKnown RBP4.25□□□□□ -1.73
TRAPPC9-216ENST00000634178 MBLAC1A4D2B0 266 aaPredicted RBP4.25□□□□□ -1.73
TRAPPC9-216ENST00000634178 A8MU76 341 aa4.25□□□□□ -1.73
TRAPPC9-216ENST00000634178 GPR89AB7ZAQ6 455 aa4.25□□□□□ -1.73
TRAPPC9-216ENST00000634178 WASH3PC4AMC7 463 aa4.25□□□□□ -1.73
TRAPPC9-216ENST00000634178 IKBKBO14920 756 aa4.25□□□□□ -1.73
TRAPPC9-216ENST00000634178 TFECO14948 347 aaPredicted RBP4.25□□□□□ -1.73
TRAPPC9-216ENST00000634178 TLX2O43763 284 aaPredicted RBP4.25□□□□□ -1.73
TRAPPC9-216ENST00000634178 SURF6O75683 361 aaKnown RBP4.25□□□□□ -1.73
TRAPPC9-216ENST00000634178 APBB3O95704 486 aa4.25□□□□□ -1.73
TRAPPC9-216ENST00000634178 CALCAP01258 141 aa4.25□□□□□ -1.73
TRAPPC9-216ENST00000634178 RETP07949 1114 aa4.25□□□□□ -1.73
TRAPPC9-216ENST00000634178 GPR89BP0CG08 455 aa4.25□□□□□ -1.73
TRAPPC9-216ENST00000634178 EPB41P11171 864 aaKnown RBP4.25□□□□□ -1.73
TRAPPC9-216ENST00000634178 CALML3P27482 149 aa4.25□□□□□ -1.73
TRAPPC9-216ENST00000634178 PDHA2P29803 388 aa4.25□□□□□ -1.73
TRAPPC9-216ENST00000634178 ADRA1AP35348 466 aa4.25□□□□□ -1.73
TRAPPC9-216ENST00000634178 OPRL1P41146 370 aa4.25□□□□□ -1.73
TRAPPC9-216ENST00000634178 NDST2P52849 883 aa4.25□□□□□ -1.73
TRAPPC9-216ENST00000634178 GNB1P62873 340 aa4.25□□□□□ -1.73
TRAPPC9-216ENST00000634178 PPIAP62937 165 aaKnown RBP4.25□□□□□ -1.73
TRAPPC9-216ENST00000634178 NOP14P78316 857 aaKnown RBP4.25□□□□□ -1.73
TRAPPC9-216ENST00000634178 SRYQ05066 204 aa4.25□□□□□ -1.73
TRAPPC9-216ENST00000634178 ZNF177Q13360 481 aaPredicted RBP4.25□□□□□ -1.73
TRAPPC9-216ENST00000634178 KIAA0141Q14154 515 aaPredicted RBP4.25□□□□□ -1.73
TRAPPC9-216ENST00000634178 FASTKQ14296 549 aaKnown RBP4.25□□□□□ -1.73
TRAPPC9-216ENST00000634178 MTF1Q14872 753 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms