RNA–Protein interactions for RNA: ENST00000628078.2

TCF4-262, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-262ENST00000628078 PSPHP78330 225 aa12.08□□□□□ -0.48
TCF4-262ENST00000628078 PRR5P85299 388 aa12.08□□□□□ -0.48
TCF4-262ENST00000628078 PPP2R2BQ00005 443 aa12.08□□□□□ -0.48
TCF4-262ENST00000628078 TMEM44Q2T9K0 475 aa12.08□□□□□ -0.48
TCF4-262ENST00000628078 FAM153CQ494X1 144 aa12.08□□□□□ -0.48
TCF4-262ENST00000628078 PRSS57Q6UWY2 283 aa12.08□□□□□ -0.48
TCF4-262ENST00000628078 C20orf204Q6ZNR8 217 aa12.08□□□□□ -0.48
TCF4-262ENST00000628078 ZNF619Q8N2I2 560 aa12.08□□□□□ -0.48
TCF4-262ENST00000628078 ATP6V1C2Q8NEY4 427 aa12.08□□□□□ -0.48
TCF4-262ENST00000628078 NUP43Q8NFH3 380 aa12.08□□□□□ -0.48
TCF4-262ENST00000628078 RAB3IL1Q8TBN0 382 aa12.08□□□□□ -0.48
TCF4-262ENST00000628078 TMEM171Q8WVE6 324 aa12.08□□□□□ -0.48
TCF4-262ENST00000628078 RNF145Q96MT1 663 aa12.08□□□□□ -0.48
TCF4-262ENST00000628078 ACTR6Q9GZN1 396 aa12.08□□□□□ -0.48
TCF4-262ENST00000628078 SIRT5Q9NXA8 310 aa12.08□□□□□ -0.48
TCF4-262ENST00000628078 SH3BP4Q9P0V3 963 aa12.08□□□□□ -0.48
TCF4-262ENST00000628078 ADAM21Q9UKJ8 722 aa12.08□□□□□ -0.48
TCF4-262ENST00000628078 STK38LQ9Y2H1 464 aa12.08□□□□□ -0.48
TCF4-262ENST00000628078 USF3Q68DE3 2245 aa12.07□□□□□ -0.48
TCF4-262ENST00000628078 SERTM1A2A2V5 107 aa12.07□□□□□ -0.48
TCF4-262ENST00000628078 LINC01387J3KSC0 135 aa12.07□□□□□ -0.48
TCF4-262ENST00000628078 SYNGR4O95473 234 aa12.07□□□□□ -0.48
TCF4-262ENST00000628078 SHC1P29353 583 aa12.07□□□□□ -0.48
TCF4-262ENST00000628078 SFTPDP35247 375 aa12.07□□□□□ -0.48
TCF4-262ENST00000628078 ATP5J2P56134 94 aa12.07□□□□□ -0.48
TCF4-262ENST00000628078 SLC18A2Q05940 514 aa12.07□□□□□ -0.48
TCF4-262ENST00000628078 TNK1Q13470 666 aa12.07□□□□□ -0.48
TCF4-262ENST00000628078 SLC29A2Q14542 456 aa12.07□□□□□ -0.48
TCF4-262ENST00000628078 GLYR1Q49A26 553 aaPredicted RBP12.07□□□□□ -0.48
TCF4-262ENST00000628078 BEX5Q5H9J7 111 aa12.07□□□□□ -0.48
TCF4-262ENST00000628078 CFAP157Q5JU67 520 aa12.07□□□□□ -0.48
TCF4-262ENST00000628078 HBMQ6B0K9 141 aa12.07□□□□□ -0.48
TCF4-262ENST00000628078 ZYG11AQ6WRX3 759 aa12.07□□□□□ -0.48
TCF4-262ENST00000628078 SH2D5Q6ZV89 423 aa12.07□□□□□ -0.48
TCF4-262ENST00000628078 WDR75Q8IWA0 830 aaKnown RBP12.07□□□□□ -0.48
TCF4-262ENST00000628078 SLC16A11Q8NCK7 471 aa12.07□□□□□ -0.48
TCF4-262ENST00000628078 OR6K3Q8NGY3 331 aa12.07□□□□□ -0.48
TCF4-262ENST00000628078 AKAP1Q92667 903 aaKnown RBP eCLIP12.07□□□□□ -0.48
TCF4-262ENST00000628078 OSTF1Q92882 214 aa12.07□□□□□ -0.48
TCF4-262ENST00000628078 NEUROG1Q92886 237 aa12.07□□□□□ -0.48
TCF4-262ENST00000628078 CHMP6Q96FZ7 201 aa12.07□□□□□ -0.48
TCF4-262ENST00000628078 TSSK3Q96PN8 268 aa12.07□□□□□ -0.48
TCF4-262ENST00000628078 GSX2Q9BZM3 304 aa12.07□□□□□ -0.48
TCF4-262ENST00000628078 C3orf14Q9HBI5 128 aa12.07□□□□□ -0.48
TCF4-262ENST00000628078 RRAGDQ9NQL2 400 aaPredicted RBP12.07□□□□□ -0.48
TCF4-262ENST00000628078 TAS2R7Q9NYW3 318 aa12.07□□□□□ -0.48
TCF4-262ENST00000628078 DCDC2Q9UHG0 476 aa12.07□□□□□ -0.48
TCF4-262ENST00000628078 LAMP3Q9UQV4 416 aa12.07□□□□□ -0.48
TCF4-262ENST00000628078 NPIPA5A0A0B4J1W7 369 aa12.06□□□□□ -0.48
TCF4-262ENST00000628078 A0A1W2PRB8 838 aa12.06□□□□□ -0.48
TCF4-262ENST00000628078 SMIM23A6NLE4 172 aa12.06□□□□□ -0.48
TCF4-262ENST00000628078 NPIPA7E9PJI5 369 aa12.06□□□□□ -0.48
TCF4-262ENST00000628078 PDPK1O15530 556 aa12.06□□□□□ -0.48
TCF4-262ENST00000628078 NPIPA8P0DM63 369 aa12.06□□□□□ -0.48
TCF4-262ENST00000628078 FCGR2AP12318 317 aa12.06□□□□□ -0.48
TCF4-262ENST00000628078 GSTM5P46439 218 aa12.06□□□□□ -0.48
TCF4-262ENST00000628078 PCYT1AP49585 367 aa12.06□□□□□ -0.48
TCF4-262ENST00000628078 MANFP55145 182 aaKnown RBP12.06□□□□□ -0.48
TCF4-262ENST00000628078 FGFBP1Q14512 234 aa12.06□□□□□ -0.48
TCF4-262ENST00000628078 KIAA0040Q15053 153 aa12.06□□□□□ -0.48
TCF4-262ENST00000628078 DUSP5Q16690 384 aa12.06□□□□□ -0.48
TCF4-262ENST00000628078 NUFIP2Q7Z417 695 aaKnown RBP12.06□□□□□ -0.48
TCF4-262ENST00000628078 TRIM46Q7Z4K8 759 aa12.06□□□□□ -0.48
TCF4-262ENST00000628078 ATG4DQ86TL0 474 aaPredicted RBP12.06□□□□□ -0.48
TCF4-262ENST00000628078 GSPT2Q8IYD1 628 aaKnown RBP12.06□□□□□ -0.48
TCF4-262ENST00000628078 CCDC63Q8NA47 563 aa12.06□□□□□ -0.48
TCF4-262ENST00000628078 OR2T11Q8NH01 316 aa12.06□□□□□ -0.48
TCF4-262ENST00000628078 OR2V1Q8NHB1 315 aa12.06□□□□□ -0.48
TCF4-262ENST00000628078 POC1BQ8TC44 478 aa12.06□□□□□ -0.48
TCF4-262ENST00000628078 JADE3Q92613 823 aa12.06□□□□□ -0.48
TCF4-262ENST00000628078 GMPPAQ96IJ6 420 aaPredicted RBP12.06□□□□□ -0.48
TCF4-262ENST00000628078 MED17Q9NVC6 651 aa12.06□□□□□ -0.48
TCF4-262ENST00000628078 GIN1Q9NXP7 522 aa12.06□□□□□ -0.48
TCF4-262ENST00000628078 MCTS1Q9ULC4 181 aaKnown RBP12.06□□□□□ -0.48
TCF4-262ENST00000628078 CCL27Q9Y4X3 112 aa12.06□□□□□ -0.48
TCF4-262ENST00000628078 JMJD1CQ15652 2540 aa12.06□□□□□ -0.48
TCF4-262ENST00000628078 RTTNQ86VV8 2226 aa12.05□□□□□ -0.48
TCF4-262ENST00000628078 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.05□□□□□ -0.48
TCF4-262ENST00000628078 IGLV3-32A0A0A0MS00 114 aa12.05□□□□□ -0.48
TCF4-262ENST00000628078 CLOCKO15516 846 aa12.05□□□□□ -0.48
TCF4-262ENST00000628078 OIP5O43482 229 aa12.05□□□□□ -0.48
TCF4-262ENST00000628078 SS18L1O75177 396 aaPredicted RBP12.05□□□□□ -0.48
TCF4-262ENST00000628078 RSL1D1O76021 490 aaKnown RBP12.05□□□□□ -0.48
TCF4-262ENST00000628078 SLITRK5O94991 958 aa12.05□□□□□ -0.48
TCF4-262ENST00000628078 KCNK2O95069 426 aa12.05□□□□□ -0.48
TCF4-262ENST00000628078 NKX2-2O95096 273 aa12.05□□□□□ -0.48
TCF4-262ENST00000628078 PROCP04070 461 aa12.05□□□□□ -0.48
TCF4-262ENST00000628078 ABHD2P08910 425 aa12.05□□□□□ -0.48
TCF4-262ENST00000628078 LINC00032P0C843 101 aa12.05□□□□□ -0.48
TCF4-262ENST00000628078 HPGDP15428 266 aa12.05□□□□□ -0.48
TCF4-262ENST00000628078 PRIM2P49643 509 aa12.05□□□□□ -0.48
TCF4-262ENST00000628078 ZNF41P51814 821 aaPredicted RBP12.05□□□□□ -0.48
TCF4-262ENST00000628078 CARD18P57730 90 aa12.05□□□□□ -0.48
TCF4-262ENST00000628078 ZNF844Q08AG5 666 aa12.05□□□□□ -0.48
TCF4-262ENST00000628078 CAPRIN1Q14444 709 aaKnown RBP12.05□□□□□ -0.48
TCF4-262ENST00000628078 CD226Q15762 336 aa12.05□□□□□ -0.48
TCF4-262ENST00000628078 PLPPR5Q32ZL2 321 aa12.05□□□□□ -0.48
TCF4-262ENST00000628078 NDUFAF6Q330K2 333 aa12.05□□□□□ -0.48
TCF4-262ENST00000628078 GLE1Q53GS7 698 aaKnown RBP12.05□□□□□ -0.48
TCF4-262ENST00000628078 CPTPQ5TA50 214 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms