RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 ASB5Q8WWX0 329 aa12.74□□□□□ -0.37
SNRPA1-216ENST00000626000 ABTB1Q969K4 478 aaPredicted RBP12.74□□□□□ -0.37
SNRPA1-216ENST00000626000 SFXN2Q96NB2 322 aa12.74□□□□□ -0.37
SNRPA1-216ENST00000626000 TRNT1Q96Q11 434 aaKnown RBP12.74□□□□□ -0.37
SNRPA1-216ENST00000626000 PIGQQ9BRB3 760 aa12.74□□□□□ -0.37
SNRPA1-216ENST00000626000 PRDM14Q9GZV8 571 aa12.74□□□□□ -0.37
SNRPA1-216ENST00000626000 ZNF350Q9GZX5 532 aa12.74□□□□□ -0.37
SNRPA1-216ENST00000626000 FGFR1OP2Q9NVK5 253 aa12.74□□□□□ -0.37
SNRPA1-216ENST00000626000 CCDC167Q9P0B6 97 aa12.74□□□□□ -0.37
SNRPA1-216ENST00000626000 SH3BGRL2Q9UJC5 107 aa12.74□□□□□ -0.37
SNRPA1-216ENST00000626000 WDR45Q9Y484 360 aa12.74□□□□□ -0.37
SNRPA1-216ENST00000626000 DTNAQ9Y4J8 743 aa12.74□□□□□ -0.37
SNRPA1-216ENST00000626000 LIPGQ9Y5X9 500 aa12.74□□□□□ -0.37
SNRPA1-216ENST00000626000 DIDO1Q9BTC0 2240 aaKnown RBP12.74□□□□□ -0.37
SNRPA1-216ENST00000626000 A0A096LPI6 279 aa12.73□□□□□ -0.37
SNRPA1-216ENST00000626000 A0A1W2PP18 115 aa12.73□□□□□ -0.37
SNRPA1-216ENST00000626000 C7orf72A4D263 438 aa12.73□□□□□ -0.37
SNRPA1-216ENST00000626000 NR5A2O00482 541 aa12.73□□□□□ -0.37
SNRPA1-216ENST00000626000 CPN1P15169 458 aa12.73□□□□□ -0.37
SNRPA1-216ENST00000626000 ZNF17P17021 662 aa12.73□□□□□ -0.37
SNRPA1-216ENST00000626000 EIF1P41567 113 aaKnown RBP12.73□□□□□ -0.37
SNRPA1-216ENST00000626000 ZNF41P51814 821 aaPredicted RBP12.73□□□□□ -0.37
SNRPA1-216ENST00000626000 ARFIP2P53365 341 aa12.73□□□□□ -0.37
SNRPA1-216ENST00000626000 RPS26P62854 115 aaKnown RBP12.73□□□□□ -0.37
SNRPA1-216ENST00000626000 GUCY1A3Q02108 690 aa12.73□□□□□ -0.37
SNRPA1-216ENST00000626000 CRYZQ08257 329 aaKnown RBP12.73□□□□□ -0.37
SNRPA1-216ENST00000626000 STX5Q13190 355 aa12.73□□□□□ -0.37
SNRPA1-216ENST00000626000 MAPRE2Q15555 327 aa12.73□□□□□ -0.37
SNRPA1-216ENST00000626000 ZNF141Q15928 474 aa12.73□□□□□ -0.37
SNRPA1-216ENST00000626000 ZSWIM7Q19AV6 140 aa12.73□□□□□ -0.37
SNRPA1-216ENST00000626000 AGKQ53H12 422 aa12.73□□□□□ -0.37
SNRPA1-216ENST00000626000 KLHL26Q53HC5 615 aa12.73□□□□□ -0.37
SNRPA1-216ENST00000626000 WIPI1Q5MNZ9 446 aaPredicted RBP12.73□□□□□ -0.37
SNRPA1-216ENST00000626000 CCNJQ5T5M9 372 aa12.73□□□□□ -0.37
SNRPA1-216ENST00000626000 C1orf185Q5T7R7 199 aa12.73□□□□□ -0.37
SNRPA1-216ENST00000626000 MARCH3Q86UD3 253 aa12.73□□□□□ -0.37
SNRPA1-216ENST00000626000 RNF130Q86XS8 419 aa12.73□□□□□ -0.37
SNRPA1-216ENST00000626000 OR9I1Q8NGQ6 314 aa12.73□□□□□ -0.37
SNRPA1-216ENST00000626000 ZFP90Q8TF47 636 aa12.73□□□□□ -0.37
SNRPA1-216ENST00000626000 XAGE5Q8WWM1 108 aa12.73□□□□□ -0.37
SNRPA1-216ENST00000626000 RND1Q92730 232 aa12.73□□□□□ -0.37
SNRPA1-216ENST00000626000 ZBTB8AQ96BR9 441 aa12.73□□□□□ -0.37
SNRPA1-216ENST00000626000 ROPN1LQ96C74 230 aa12.73□□□□□ -0.37
SNRPA1-216ENST00000626000 C1GALT1C1Q96EU7 318 aa12.73□□□□□ -0.37
SNRPA1-216ENST00000626000 CCDC120Q96HB5 630 aa12.73□□□□□ -0.37
SNRPA1-216ENST00000626000 DMRTA2Q96SC8 542 aa12.73□□□□□ -0.37
SNRPA1-216ENST00000626000 INPP5KQ9BT40 448 aa12.73□□□□□ -0.37
SNRPA1-216ENST00000626000 TMEM120AQ9BXJ8 343 aa12.73□□□□□ -0.37
SNRPA1-216ENST00000626000 NSRP1Q9H0G5 558 aaKnown RBP12.73□□□□□ -0.37
SNRPA1-216ENST00000626000 DSN1Q9H410 356 aa12.73□□□□□ -0.37
SNRPA1-216ENST00000626000 TPT1P8Q9HAU6 139 aa12.73□□□□□ -0.37
SNRPA1-216ENST00000626000 KLHL14Q9P2G3 628 aa12.73□□□□□ -0.37
SNRPA1-216ENST00000626000 SPRR3Q9UBC9 169 aa12.73□□□□□ -0.37
SNRPA1-216ENST00000626000 P2RX2Q9UBL9 471 aa12.73□□□□□ -0.37
SNRPA1-216ENST00000626000 SLC35A3Q9Y2D2 325 aa12.73□□□□□ -0.37
SNRPA1-216ENST00000626000 GMEB1Q9Y692 573 aa12.73□□□□□ -0.37
SNRPA1-216ENST00000626000 RELNP78509 3460 aa12.72□□□□□ -0.37
SNRPA1-216ENST00000626000 C9JVG2 144 aa12.72□□□□□ -0.37
SNRPA1-216ENST00000626000 NPIPB9F8W1W9 429 aa12.72□□□□□ -0.37
SNRPA1-216ENST00000626000 GTPBP1O00178 669 aaKnown RBP12.72□□□□□ -0.37
SNRPA1-216ENST00000626000 ANGPT2O15123 496 aa12.72□□□□□ -0.37
SNRPA1-216ENST00000626000 SLC22A2O15244 555 aa12.72□□□□□ -0.37
SNRPA1-216ENST00000626000 KIAA0513O60268 411 aa12.72□□□□□ -0.37
SNRPA1-216ENST00000626000 EIF4E2O60573 245 aaKnown RBP12.72□□□□□ -0.37
SNRPA1-216ENST00000626000 OR12D1P0DN82 309 aa12.72□□□□□ -0.37
SNRPA1-216ENST00000626000 PEPDP12955 493 aa12.72□□□□□ -0.37
SNRPA1-216ENST00000626000 ADH7P40394 386 aa12.72□□□□□ -0.37
SNRPA1-216ENST00000626000 ART3Q13508 389 aa12.72□□□□□ -0.37
SNRPA1-216ENST00000626000 EIPR1Q53HC9 387 aa12.72□□□□□ -0.37
SNRPA1-216ENST00000626000 LRIF1Q5T3J3 769 aa12.72□□□□□ -0.37
SNRPA1-216ENST00000626000 ZNF585AQ6P3V2 769 aa12.72□□□□□ -0.37
SNRPA1-216ENST00000626000 TNFAIP8L2Q6P589 184 aaPredicted RBP12.72□□□□□ -0.37
SNRPA1-216ENST00000626000 MAMDC2Q7Z304 686 aaPredicted RBP12.72□□□□□ -0.37
SNRPA1-216ENST00000626000 MRGPRGQ86SM5 289 aa12.72□□□□□ -0.37
SNRPA1-216ENST00000626000 YRDCQ86U90 279 aaKnown RBP12.72□□□□□ -0.37
SNRPA1-216ENST00000626000 LACC1Q8IV20 430 aa12.72□□□□□ -0.37
SNRPA1-216ENST00000626000 CMIPQ8IY22 773 aa12.72□□□□□ -0.37
SNRPA1-216ENST00000626000 ZNF619Q8N2I2 560 aa12.72□□□□□ -0.37
SNRPA1-216ENST00000626000 METTL25Q8N6Q8 603 aa12.72□□□□□ -0.37
SNRPA1-216ENST00000626000 B4GALNT2Q8NHY0 566 aa12.72□□□□□ -0.37
SNRPA1-216ENST00000626000 RFWD2Q8NHY2 731 aa12.72□□□□□ -0.37
SNRPA1-216ENST00000626000 PHOSPHO1Q8TCT1 267 aa12.72□□□□□ -0.37
SNRPA1-216ENST00000626000 ZPLD1Q8TCW7 415 aa12.72□□□□□ -0.37
SNRPA1-216ENST00000626000 GTF2H4Q92759 462 aa12.72□□□□□ -0.37
SNRPA1-216ENST00000626000 VPS33AQ96AX1 596 aa12.72□□□□□ -0.37
SNRPA1-216ENST00000626000 OTUB1Q96FW1 271 aaPredicted RBP12.72□□□□□ -0.37
SNRPA1-216ENST00000626000 PSMG3-AS1Q96PY0 264 aa12.72□□□□□ -0.37
SNRPA1-216ENST00000626000 TIMP4Q99727 224 aa12.72□□□□□ -0.37
SNRPA1-216ENST00000626000 SAP130Q9H0E3 1048 aa12.72□□□□□ -0.37
SNRPA1-216ENST00000626000 PNPLA3Q9NST1 481 aa12.72□□□□□ -0.37
SNRPA1-216ENST00000626000 LEF1Q9UJU2 399 aaPredicted RBP12.72□□□□□ -0.37
SNRPA1-216ENST00000626000 FBXL2Q9UKC9 423 aa12.72□□□□□ -0.37
SNRPA1-216ENST00000626000 KLF2Q9Y5W3 355 aaPredicted RBP12.72□□□□□ -0.37
SNRPA1-216ENST00000626000 SPTBN1Q01082 2364 aaKnown RBP12.72□□□□□ -0.37
SNRPA1-216ENST00000626000 MYO7BQ6PIF6 2116 aa12.71□□□□□ -0.37
SNRPA1-216ENST00000626000 DOPEY2Q9Y3R5 2298 aa12.71□□□□□ -0.37
SNRPA1-216ENST00000626000 NCKAP5O14513 1909 aa12.71□□□□□ -0.37
SNRPA1-216ENST00000626000 C2orf72A6NCS6 295 aa12.71□□□□□ -0.37
SNRPA1-216ENST00000626000 EVPLLA8MZ36 301 aa12.71□□□□□ -0.37
SNRPA1-216ENST00000626000 HMGN4O00479 90 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms