RNA–Protein interactions for RNA: ENST00000625778.2

UBE3A-209, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 3,217 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-209ENST00000625778 EMC7Q9NPA0 242 aa12.98□□□□□ -0.33
UBE3A-209ENST00000625778 CCL26Q9Y258 94 aa12.98□□□□□ -0.33
UBE3A-209ENST00000625778 PLXND1Q9Y4D7 1925 aa12.98□□□□□ -0.33
UBE3A-209ENST00000625778 IRGMA1A4Y4 181 aa12.98□□□□□ -0.33
UBE3A-209ENST00000625778 KDM4BO94953 1096 aa12.98□□□□□ -0.33
UBE3A-209ENST00000625778 RPLP2P05387 115 aaKnown RBP12.98□□□□□ -0.33
UBE3A-209ENST00000625778 RD3LP0DJH9 198 aa12.98□□□□□ -0.33
UBE3A-209ENST00000625778 GSTM3P21266 225 aa12.98□□□□□ -0.33
UBE3A-209ENST00000625778 MAPK9P45984 424 aa12.98□□□□□ -0.33
UBE3A-209ENST00000625778 BLVRAP53004 296 aa12.98□□□□□ -0.33
UBE3A-209ENST00000625778 BTG1P62324 171 aa12.98□□□□□ -0.33
UBE3A-209ENST00000625778 ARHGAP15Q53QZ3 475 aa12.98□□□□□ -0.33
UBE3A-209ENST00000625778 NDUFAF5Q5TEU4 345 aa12.98□□□□□ -0.33
UBE3A-209ENST00000625778 KHDRBS2Q5VWX1 349 aaKnown RBP12.98□□□□□ -0.33
UBE3A-209ENST00000625778 HBMQ6B0K9 141 aa12.98□□□□□ -0.33
UBE3A-209ENST00000625778 SLC25A25Q6KCM7 469 aa12.98□□□□□ -0.33
UBE3A-209ENST00000625778 C17orf99Q6UX52 265 aa12.98□□□□□ -0.33
UBE3A-209ENST00000625778 TMEM255BQ8WV15 326 aa12.98□□□□□ -0.33
UBE3A-209ENST00000625778 C12orf57Q99622 126 aa12.98□□□□□ -0.33
UBE3A-209ENST00000625778 GLIPR2Q9H4G4 154 aa12.98□□□□□ -0.33
UBE3A-209ENST00000625778 CYSLTR2Q9NS75 346 aa12.98□□□□□ -0.33
UBE3A-209ENST00000625778 TET1Q8NFU7 2136 aa12.98□□□□□ -0.33
UBE3A-209ENST00000625778 GLTPD2A6NH11 291 aa12.98□□□□□ -0.33
UBE3A-209ENST00000625778 SCAMP1O15126 338 aa12.98□□□□□ -0.33
UBE3A-209ENST00000625778 MID1O15344 667 aa12.98□□□□□ -0.33
UBE3A-209ENST00000625778 FGBP02675 491 aa12.98□□□□□ -0.33
UBE3A-209ENST00000625778 ANKRD34CP0C6C1 535 aa12.98□□□□□ -0.33
UBE3A-209ENST00000625778 TRHRP34981 398 aaPredicted RBP12.98□□□□□ -0.33
UBE3A-209ENST00000625778 KIAA1024LP59773 190 aa12.98□□□□□ -0.33
UBE3A-209ENST00000625778 PUDPQ08623 228 aa12.98□□□□□ -0.33
UBE3A-209ENST00000625778 COL28A1Q2UY09 1125 aa12.98□□□□□ -0.33
UBE3A-209ENST00000625778 C9orf64Q5T6V5 341 aa12.98□□□□□ -0.33
UBE3A-209ENST00000625778 ZDHHC20Q5W0Z9 365 aa12.98□□□□□ -0.33
UBE3A-209ENST00000625778 ALKAL2Q6UX46 152 aa12.98□□□□□ -0.33
UBE3A-209ENST00000625778 LINGO2Q7L985 606 aa12.98□□□□□ -0.33
UBE3A-209ENST00000625778 CXXC5Q7LFL8 322 aaKnown RBP12.98□□□□□ -0.33
UBE3A-209ENST00000625778 NPAS4Q8IUM7 802 aa12.98□□□□□ -0.33
UBE3A-209ENST00000625778 ANKRD53Q8N9V6 530 aa12.98□□□□□ -0.33
UBE3A-209ENST00000625778 RPLP0P6Q8NHW5 317 aa12.98□□□□□ -0.33
UBE3A-209ENST00000625778 LHFPL5Q8TAF8 219 aa12.98□□□□□ -0.33
UBE3A-209ENST00000625778 GNPDA2Q8TDQ7 276 aa12.98□□□□□ -0.33
UBE3A-209ENST00000625778 SCMH1Q96GD3 660 aa12.98□□□□□ -0.33
UBE3A-209ENST00000625778 ZCCHC2Q9C0B9 1178 aaKnown RBP12.98□□□□□ -0.33
UBE3A-209ENST00000625778 WSB2Q9NYS7 404 aaPredicted RBP12.98□□□□□ -0.33
UBE3A-209ENST00000625778 PHF11Q9UIL8 331 aa12.98□□□□□ -0.33
UBE3A-209ENST00000625778 UNC80Q8N2C7 3258 aa12.98□□□□□ -0.33
UBE3A-209ENST00000625778 ARID1BQ8NFD5 2236 aaPredicted RBP12.97□□□□□ -0.33
UBE3A-209ENST00000625778 RPS10-NUDT3A0A1W2PQS6 291 aa12.97□□□□□ -0.33
UBE3A-209ENST00000625778 POP7O75817 140 aaKnown RBP12.97□□□□□ -0.33
UBE3A-209ENST00000625778 PTHLHP12272 177 aa12.97□□□□□ -0.33
UBE3A-209ENST00000625778 POU3F2P20265 443 aaPredicted RBP12.97□□□□□ -0.33
UBE3A-209ENST00000625778 IFNGR2P38484 337 aa12.97□□□□□ -0.33
UBE3A-209ENST00000625778 CAPZA2P47755 286 aa12.97□□□□□ -0.33
UBE3A-209ENST00000625778 RFX3P48380 749 aa12.97□□□□□ -0.33
UBE3A-209ENST00000625778 PRLHRP49683 370 aa12.97□□□□□ -0.33
UBE3A-209ENST00000625778 CD200R1LQ6Q8B3 271 aa12.97□□□□□ -0.33
UBE3A-209ENST00000625778 TRAM1L1Q8N609 369 aa12.97□□□□□ -0.33
UBE3A-209ENST00000625778 VOPP1Q96AW1 172 aa12.97□□□□□ -0.33
UBE3A-209ENST00000625778 CHFRQ96EP1 664 aa12.97□□□□□ -0.33
UBE3A-209ENST00000625778 SORCS2Q96PQ0 1159 aa12.97□□□□□ -0.33
UBE3A-209ENST00000625778 WNT1P04628 370 aa12.97□□□□□ -0.33
UBE3A-209ENST00000625778 HK1P19367 917 aa12.97□□□□□ -0.33
UBE3A-209ENST00000625778 PYCR1P32322 319 aa12.97□□□□□ -0.33
UBE3A-209ENST00000625778 VEGFCP49767 419 aa12.97□□□□□ -0.33
UBE3A-209ENST00000625778 HENMT1Q5T8I9 393 aaKnown RBP12.97□□□□□ -0.33
UBE3A-209ENST00000625778 RNLSQ5VYX0 342 aa12.97□□□□□ -0.33
UBE3A-209ENST00000625778 Q6ZNB5 142 aa12.97□□□□□ -0.33
UBE3A-209ENST00000625778 DGLUCYQ7Z3D6 616 aa12.97□□□□□ -0.33
UBE3A-209ENST00000625778 ACBD7Q8N6N7 88 aa12.97□□□□□ -0.33
UBE3A-209ENST00000625778 C17orf47Q8NEP4 570 aa12.97□□□□□ -0.33
UBE3A-209ENST00000625778 OR51L1Q8NGJ5 315 aa12.97□□□□□ -0.33
UBE3A-209ENST00000625778 OR5W2Q8NH69 310 aa12.97□□□□□ -0.33
UBE3A-209ENST00000625778 SGIP1Q9BQI5 828 aa12.97□□□□□ -0.33
UBE3A-209ENST00000625778 TMEM175Q9BSA9 504 aa12.97□□□□□ -0.33
UBE3A-209ENST00000625778 DPH7Q9BTV6 452 aa12.97□□□□□ -0.33
UBE3A-209ENST00000625778 FAIM2Q9BWQ8 316 aa12.97□□□□□ -0.33
UBE3A-209ENST00000625778 DPH1Q9BZG8 443 aa12.97□□□□□ -0.33
UBE3A-209ENST00000625778 DLL4Q9NR61 685 aa12.97□□□□□ -0.33
UBE3A-209ENST00000625778 AK6Q9Y3D8 172 aaKnown RBP12.97□□□□□ -0.33
UBE3A-209ENST00000625778 HRH3Q9Y5N1 445 aa12.97□□□□□ -0.33
UBE3A-209ENST00000625778 H3BSH0 61 aa12.96□□□□□ -0.33
UBE3A-209ENST00000625778 GRM6O15303 877 aa12.96□□□□□ -0.33
UBE3A-209ENST00000625778 SOX30O94993 753 aa12.96□□□□□ -0.33
UBE3A-209ENST00000625778 ACSM4P0C7M7 580 aa12.96□□□□□ -0.33
UBE3A-209ENST00000625778 TIMP2P16035 220 aa12.96□□□□□ -0.33
UBE3A-209ENST00000625778 GPR1P46091 355 aa12.96□□□□□ -0.33
UBE3A-209ENST00000625778 HCCSP53701 268 aa12.96□□□□□ -0.33
UBE3A-209ENST00000625778 CAMK2DQ13557 499 aa12.96□□□□□ -0.33
UBE3A-209ENST00000625778 TCTN1Q2MV58 587 aa12.96□□□□□ -0.33
UBE3A-209ENST00000625778 GAREM2Q75VX8 874 aa12.96□□□□□ -0.33
UBE3A-209ENST00000625778 PRSS42Q7Z5A4 293 aa12.96□□□□□ -0.33
UBE3A-209ENST00000625778 METTL3Q86U44 580 aaKnown RBP12.96□□□□□ -0.33
UBE3A-209ENST00000625778 OAFQ86UD1 273 aa12.96□□□□□ -0.33
UBE3A-209ENST00000625778 LINC00518Q8N0U6 118 aa12.96□□□□□ -0.33
UBE3A-209ENST00000625778 PCSK9Q8NBP7 692 aaKnown RBP12.96□□□□□ -0.33
UBE3A-209ENST00000625778 CXorf58Q96LI9 332 aa12.96□□□□□ -0.33
UBE3A-209ENST00000625778 ZSWIM3Q96MP5 696 aa12.96□□□□□ -0.33
UBE3A-209ENST00000625778 ERMAPQ96PL5 475 aaPredicted RBP12.96□□□□□ -0.33
UBE3A-209ENST00000625778 FUZQ9BT04 418 aa12.96□□□□□ -0.33
UBE3A-209ENST00000625778 HCAR1Q9BXC0 346 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms