RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 CGAP01215 116 aa3.82□□□□□ -1.8
CPNE3-213ENST00000622183 UMPSP11172 480 aa3.82□□□□□ -1.8
CPNE3-213ENST00000622183 LAMP1P11279 417 aa3.82□□□□□ -1.8
CPNE3-213ENST00000622183 CAPN2P17655 700 aa3.82□□□□□ -1.8
CPNE3-213ENST00000622183 IDSP22304 550 aa3.82□□□□□ -1.8
CPNE3-213ENST00000622183 ATP5A1P25705 553 aaKnown RBP3.82□□□□□ -1.8
CPNE3-213ENST00000622183 GNPDA1P46926 289 aa3.82□□□□□ -1.8
CPNE3-213ENST00000622183 ACTR1AP61163 376 aa3.82□□□□□ -1.8
CPNE3-213ENST00000622183 RND3P61587 244 aa3.82□□□□□ -1.8
CPNE3-213ENST00000622183 RPL8P62917 257 aaKnown RBP3.82□□□□□ -1.8
CPNE3-213ENST00000622183 ZFP36L1Q07352 338 aaKnown RBP3.82□□□□□ -1.8
CPNE3-213ENST00000622183 PUDPQ08623 228 aa3.82□□□□□ -1.8
CPNE3-213ENST00000622183 PEX6Q13608 980 aa3.82□□□□□ -1.8
CPNE3-213ENST00000622183 SLC10A1Q14973 349 aa3.82□□□□□ -1.8
CPNE3-213ENST00000622183 CCDC152Q4G0S7 254 aa3.82□□□□□ -1.8
CPNE3-213ENST00000622183 LRRC23Q53EV4 343 aaPredicted RBP3.82□□□□□ -1.8
CPNE3-213ENST00000622183 MEDAGQ5VYS4 303 aa3.82□□□□□ -1.8
CPNE3-213ENST00000622183 ZNF772Q68DY9 489 aaPredicted RBP3.82□□□□□ -1.8
CPNE3-213ENST00000622183 ZNF57Q68EA5 555 aaPredicted RBP3.82□□□□□ -1.8
CPNE3-213ENST00000622183 PVRIGQ6DKI7 326 aa3.82□□□□□ -1.8
CPNE3-213ENST00000622183 M1APQ8TC57 530 aa3.82□□□□□ -1.8
CPNE3-213ENST00000622183 VN1R17PQ8TDU5 208 aa3.82□□□□□ -1.8
CPNE3-213ENST00000622183 CTNNBL1Q8WYA6 563 aaPredicted RBP3.82□□□□□ -1.8
CPNE3-213ENST00000622183 FAM3CQ92520 227 aa3.82□□□□□ -1.8
CPNE3-213ENST00000622183 C1orf147Q96MC9 270 aaPredicted RBP3.82□□□□□ -1.8
CPNE3-213ENST00000622183 DUSP16Q9BY84 665 aa3.82□□□□□ -1.8
CPNE3-213ENST00000622183 PUS3Q9BZE2 481 aaKnown RBP3.82□□□□□ -1.8
CPNE3-213ENST00000622183 ELOVL3Q9HB03 270 aa3.82□□□□□ -1.8
CPNE3-213ENST00000622183 SMPD3Q9NY59 655 aaPredicted RBP3.82□□□□□ -1.8
CPNE3-213ENST00000622183 USP6P35125 1406 aa3.81□□□□□ -1.8
CPNE3-213ENST00000622183 C15orf38-AP3S2A0A0A6YYH1 394 aa3.81□□□□□ -1.8
CPNE3-213ENST00000622183 A0A1W2PNV4 684 aa3.81□□□□□ -1.8
CPNE3-213ENST00000622183 EFCAB7A8K855 629 aa3.81□□□□□ -1.8
CPNE3-213ENST00000622183 FAM220BPB1ANY3 271 aa3.81□□□□□ -1.8
CPNE3-213ENST00000622183 G3V3Y1 287 aa3.81□□□□□ -1.8
CPNE3-213ENST00000622183 MTX2O75431 263 aa3.81□□□□□ -1.8
CPNE3-213ENST00000622183 UQCRC2P22695 453 aa3.81□□□□□ -1.8
CPNE3-213ENST00000622183 CDH5P33151 784 aaPredicted RBP3.81□□□□□ -1.8
CPNE3-213ENST00000622183 EWSR1Q01844 656 aaKnown RBP eCLIP3.81□□□□□ -1.8
CPNE3-213ENST00000622183 RGS1Q08116 209 aa3.81□□□□□ -1.8
CPNE3-213ENST00000622183 COX10Q12887 443 aa3.81□□□□□ -1.8
CPNE3-213ENST00000622183 IL24Q13007 206 aa3.81□□□□□ -1.8
CPNE3-213ENST00000622183 DPYSL3Q14195 570 aa3.81□□□□□ -1.8
CPNE3-213ENST00000622183 SYPL1Q16563 259 aa3.81□□□□□ -1.8
CPNE3-213ENST00000622183 TEX44Q53QW1 395 aa3.81□□□□□ -1.8
CPNE3-213ENST00000622183 FAM120AOSQ5T036 256 aa3.81□□□□□ -1.8
CPNE3-213ENST00000622183 KDELC1Q6UW63 502 aa3.81□□□□□ -1.8
CPNE3-213ENST00000622183 GCNT7Q6ZNI0 430 aa3.81□□□□□ -1.8
CPNE3-213ENST00000622183 KIAA1328Q86T90 577 aa3.81□□□□□ -1.8
CPNE3-213ENST00000622183 ZNF683Q8IZ20 524 aa3.81□□□□□ -1.8
CPNE3-213ENST00000622183 LRRC43Q8N309 656 aa3.81□□□□□ -1.8
CPNE3-213ENST00000622183 CLDN19Q8N6F1 224 aa3.81□□□□□ -1.8
CPNE3-213ENST00000622183 SYT14Q8NB59 555 aa3.81□□□□□ -1.8
CPNE3-213ENST00000622183 OR2L2Q8NH16 312 aa3.81□□□□□ -1.8
CPNE3-213ENST00000622183 CNIH3Q8TBE1 160 aa3.81□□□□□ -1.8
CPNE3-213ENST00000622183 RPL3LQ92901 407 aaKnown RBP3.81□□□□□ -1.8
CPNE3-213ENST00000622183 GNG12Q9UBI6 72 aa3.81□□□□□ -1.8
CPNE3-213ENST00000622183 A0A1B0GU03 582 aa3.8□□□□□ -1.8
CPNE3-213ENST00000622183 RHBDL1O75783 438 aa3.8□□□□□ -1.8
CPNE3-213ENST00000622183 SLC2A10O95528 541 aa3.8□□□□□ -1.8
CPNE3-213ENST00000622183 PGCP20142 388 aa3.8□□□□□ -1.8
CPNE3-213ENST00000622183 BCL3P20749 454 aa3.8□□□□□ -1.8
CPNE3-213ENST00000622183 RIPPLY1Q0D2K3 151 aa3.8□□□□□ -1.8
CPNE3-213ENST00000622183 LPAL2Q16609 132 aa3.8□□□□□ -1.8
CPNE3-213ENST00000622183 HIGD2BQ4VC39 106 aa3.8□□□□□ -1.8
CPNE3-213ENST00000622183 OR8G2PQ6IF36 304 aa3.8□□□□□ -1.8
CPNE3-213ENST00000622183 CENPPQ6IPU0 288 aa3.8□□□□□ -1.8
CPNE3-213ENST00000622183 ACSM5Q6NUN0 579 aa3.8□□□□□ -1.8
CPNE3-213ENST00000622183 CNPY4Q8N129 248 aa3.8□□□□□ -1.8
CPNE3-213ENST00000622183 ANKFN1Q8N957 763 aa3.8□□□□□ -1.8
CPNE3-213ENST00000622183 ZNF485Q8NCK3 441 aa3.8□□□□□ -1.8
CPNE3-213ENST00000622183 OR9A4Q8NGU2 314 aa3.8□□□□□ -1.8
CPNE3-213ENST00000622183 TRMT10AQ8TBZ6 339 aaKnown RBP3.8□□□□□ -1.8
CPNE3-213ENST00000622183 ADAMTS16Q8TE57 1224 aa3.8□□□□□ -1.8
CPNE3-213ENST00000622183 IL1F10Q8WWZ1 152 aa3.8□□□□□ -1.8
CPNE3-213ENST00000622183 EMG1Q92979 244 aaKnown RBP3.8□□□□□ -1.8
CPNE3-213ENST00000622183 TMEM80Q96HE8 168 aa3.8□□□□□ -1.8
CPNE3-213ENST00000622183 PPP1R16AQ96I34 528 aa3.8□□□□□ -1.8
CPNE3-213ENST00000622183 RANBP9Q96S59 729 aa3.8□□□□□ -1.8
CPNE3-213ENST00000622183 RIT2Q99578 217 aa3.8□□□□□ -1.8
CPNE3-213ENST00000622183 CUTCQ9NTM9 273 aa3.8□□□□□ -1.8
CPNE3-213ENST00000622183 C6orf203Q9P0P8 240 aaPredicted RBP3.8□□□□□ -1.8
CPNE3-213ENST00000622183 SLC2A6Q9UGQ3 507 aa3.8□□□□□ -1.8
CPNE3-213ENST00000622183 SYNJ2BP-COX16A0A087WUM0 186 aa3.79□□□□□ -1.8
CPNE3-213ENST00000622183 SAGE2PA6NJ88 616 aa3.79□□□□□ -1.8
CPNE3-213ENST00000622183 OR6C65A6NJZ3 312 aa3.79□□□□□ -1.8
CPNE3-213ENST00000622183 CCT8L1PA6NM43 557 aa3.79□□□□□ -1.8
CPNE3-213ENST00000622183 BTN3A3O00478 584 aa3.79□□□□□ -1.8
CPNE3-213ENST00000622183 RIPK2O43353 540 aa3.79□□□□□ -1.8
CPNE3-213ENST00000622183 TPST2O60704 377 aa3.79□□□□□ -1.8
CPNE3-213ENST00000622183 F10P00742 488 aa3.79□□□□□ -1.8
CPNE3-213ENST00000622183 CD55P08174 381 aa3.79□□□□□ -1.8
CPNE3-213ENST00000622183 H2BFMP0C1H6 154 aa3.79□□□□□ -1.8
CPNE3-213ENST00000622183 GATA1P15976 413 aaPredicted RBP3.79□□□□□ -1.8
CPNE3-213ENST00000622183 HNF1AP20823 631 aa3.79□□□□□ -1.8
CPNE3-213ENST00000622183 PTGER3P43115 390 aa3.79□□□□□ -1.8
CPNE3-213ENST00000622183 IST1P53990 364 aa3.79□□□□□ -1.8
CPNE3-213ENST00000622183 ZNF154Q13106 437 aa3.79□□□□□ -1.8
CPNE3-213ENST00000622183 RUNX3Q13761 415 aa3.79□□□□□ -1.8
CPNE3-213ENST00000622183 GGTA1PQ4G0N0 100 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms