RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 MRPL3P09001 348 aaKnown RBP6.53□□□□□ -1.36
NEDD9-216ENST00000620854 HOXB2P14652 356 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 AHRP35869 848 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 SKP1P63208 163 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 EEF1A2Q05639 463 aaKnown RBP6.53□□□□□ -1.36
NEDD9-216ENST00000620854 SNTA1Q13424 505 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 ZNF750Q32MQ0 723 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 ZNF311Q5JNZ3 666 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 SLC25A24Q6NUK1 477 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 GALNTL5Q7Z4T8 443 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.53□□□□□ -1.36
NEDD9-216ENST00000620854 GPR135Q8IZ08 494 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 COX18Q8N8Q8 333 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 RASGEF1AQ8N9B8 481 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 OR2T35Q8NGX2 323 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 RNASE11Q8TAA1 199 aaKnown RBP6.53□□□□□ -1.36
NEDD9-216ENST00000620854 FIBINQ8TAL6 211 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 TSEN15Q8WW01 171 aaKnown RBP6.53□□□□□ -1.36
NEDD9-216ENST00000620854 DNAJA4Q8WW22 397 aaPredicted RBP6.53□□□□□ -1.36
NEDD9-216ENST00000620854 TCEAL4Q96EI5 215 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 ALG14Q96F25 216 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 KLF16Q9BXK1 252 aaPredicted RBP6.53□□□□□ -1.36
NEDD9-216ENST00000620854 DDX31Q9H8H2 851 aaKnown RBP6.53□□□□□ -1.36
NEDD9-216ENST00000620854 BRD7Q9NPI1 651 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 OR6C2Q9NZP2 312 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 TNFRSF10DQ9UBN6 386 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 DIMT1Q9UNQ2 313 aaKnown RBP6.53□□□□□ -1.36
NEDD9-216ENST00000620854 RASD1Q9Y272 281 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 PLXND1Q9Y4D7 1925 aa6.53□□□□□ -1.36
NEDD9-216ENST00000620854 J3QLW9 94 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 MAGEB4O15481 346 aaPredicted RBP6.52□□□□□ -1.37
NEDD9-216ENST00000620854 DPM1O60762 260 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 TFPIP10646 304 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 PIPP12273 146 aaPredicted RBP6.52□□□□□ -1.37
NEDD9-216ENST00000620854 ZNF19P17023 458 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 POLR2CP19387 275 aaPredicted RBP6.52□□□□□ -1.37
NEDD9-216ENST00000620854 AHCYP23526 432 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 DNASE1P24855 282 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 STOMP27105 288 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 EPHA5P54756 1037 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 PCBP3P57721 371 aaKnown RBP6.52□□□□□ -1.37
NEDD9-216ENST00000620854 ID2Q02363 134 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 PUDPQ08623 228 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 RUNX3Q13761 415 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 EXOSC2Q13868 293 aaKnown RBP6.52□□□□□ -1.37
NEDD9-216ENST00000620854 SF3A2Q15428 464 aaKnown RBP6.52□□□□□ -1.37
NEDD9-216ENST00000620854 FCRLBQ6BAA4 426 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 METTL2BQ6P1Q9 378 aaKnown RBP6.52□□□□□ -1.37
NEDD9-216ENST00000620854 LYPD4Q6UWN0 246 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 TMEM91Q6ZNR0 172 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 BTN2A1Q7KYR7 527 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 NR2C2APQ86WQ0 139 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 KIF18BQ86Y91 864 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 TMEM163Q8TC26 289 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 TFGQ92734 400 aaPredicted RBP6.52□□□□□ -1.37
NEDD9-216ENST00000620854 RFT1Q96AA3 541 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 ABHD1Q96SE0 405 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 MS4A7Q9GZW8 240 aaPredicted RBP6.52□□□□□ -1.37
NEDD9-216ENST00000620854 TMEM38AQ9H6F2 299 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 ZNF334Q9HCZ1 680 aaPredicted RBP6.52□□□□□ -1.37
NEDD9-216ENST00000620854 FAM186AA6NE01 2351 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 H7BY64 318 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 FAAHO00519 579 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 SOCS6O14544 535 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 SIGLEC5O15389 551 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 PROM1O43490 865 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 MMP20O60882 483 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 SLC43A1O75387 559 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 ABLIM3O94929 683 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 SOD1P00441 154 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 MT-ND4P03905 459 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 HLA-DPB1P04440 258 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 EIF4EP06730 217 aaKnown RBP6.52□□□□□ -1.37
NEDD9-216ENST00000620854 GNSP15586 552 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 ZNF30P17039 623 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 FUT1P19526 365 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 SLC1A3P43003 542 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 PGDP52209 483 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 SIGLEC14Q08ET2 396 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 TMEM115Q12893 351 aaPredicted RBP6.52□□□□□ -1.37
NEDD9-216ENST00000620854 SHHQ15465 462 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 PIP5KL1Q5T9C9 394 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 ZNF776Q68DI1 518 aaPredicted RBP6.52□□□□□ -1.37
NEDD9-216ENST00000620854 SLC27A4Q6P1M0 643 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 NUDT13Q86X67 352 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 SRFBP1Q8NEF9 429 aaKnown RBP6.52□□□□□ -1.37
NEDD9-216ENST00000620854 DUSP18Q8NEJ0 188 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 RBM18Q96H35 190 aaKnown RBP6.52□□□□□ -1.37
NEDD9-216ENST00000620854 PRAP1Q96NZ9 151 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 GAL3ST4Q96RP7 486 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 CACNG6Q9BXT2 260 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 NANSQ9NR45 359 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 PFDN2Q9UHV9 154 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 RABL2BQ9UNT1 228 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 FLVCR2Q9UPI3 526 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 PCDHGB7Q9Y5F8 929 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 ATG2BQ96BY7 2078 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 LGALS8O00214 317 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 B4GALT2O60909 372 aa6.52□□□□□ -1.37
NEDD9-216ENST00000620854 KAT7O95251 611 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms