RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 ABHD16BQ9H3Z7 469 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 SDR39U1Q9NRG7 319 aaPredicted RBP4.76□□□□□ -1.65
VPS13D-214ENST00000620676 ABCC13Q9NSE7 274 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 TCRBP04435 133 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 GKN3PP0CG01 181 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 KHKP50053 298 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 RAB13P51153 203 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 TAP2Q03519 686 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 SLC8B1Q6J4K2 584 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 UNC5DQ6UXZ4 953 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 LARP4Q71RC2 724 aaKnown RBP eCLIP4.76□□□□□ -1.65
VPS13D-214ENST00000620676 CERS5Q8N5B7 392 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 GCDHQ92947 438 aaPredicted RBP4.76□□□□□ -1.65
VPS13D-214ENST00000620676 CPNE6O95741 557 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 SCG5P05408 212 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 EPHA1P21709 976 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 AGTR1P30556 359 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 CATSPERGQ6ZRH7 1159 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 SIAH1Q8IUQ4 282 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 ADGRF3Q8IZF5 1079 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 SPACA7Q96KW9 195 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 GSX2Q9BZM3 304 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 SLC19A3Q9BZV2 496 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 ACTL8Q9H568 366 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 RDH14Q9HBH5 336 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 HACL1Q9UJ83 578 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 IGLV3-22A0A075B6J6 115 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 ZNF320A2RRD8 509 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 YY2O15391 372 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 ZNF28P17035 718 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 PTPN2P17706 415 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 ETFDHQ16134 617 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 COX20Q5RI15 118 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 SYT13Q7L8C5 426 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 CDH26Q8IXH8 852 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 TMED6Q8WW62 240 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 SLC35G5Q96KT7 338 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 FAM120CQ9NX05 1096 aaKnown RBP4.76□□□□□ -1.65
VPS13D-214ENST00000620676 LIPT1Q9Y234 373 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 MYH7P12883 1935 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 LMTK2Q8IWU2 1503 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 ZNF208O43345 1280 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 CNOT4O95628 575 aaKnown RBP4.76□□□□□ -1.65
VPS13D-214ENST00000620676 ALDH1A1P00352 501 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 F10P00742 488 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 GAAP10253 952 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 SNU13P55769 128 aaKnown RBP4.76□□□□□ -1.65
VPS13D-214ENST00000620676 ACTA2P62736 377 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 ACTG2P63267 376 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 ACTC1P68032 377 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 ACTA1P68133 377 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 KEAP1Q14145 624 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 NKG7Q16617 165 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 TSSK4Q6SA08 328 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 GPR155Q7Z3F1 870 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 OR2W3Q7Z3T1 314 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 NUDT13Q86X67 352 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 MCEMP1Q8IX19 187 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 FAM213BQ8TBF2 198 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 SYT11Q9BT88 431 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 BORCS7-ASMTA0A0B4J1R7 106 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 ANHXE9PGG2 379 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 HLA-AP01891 365 aaKnown RBP4.76□□□□□ -1.65
VPS13D-214ENST00000620676 ADRA2BP18089 450 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 TANKQ92844 425 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 ZMAT3Q9HA38 289 aaKnown RBP4.76□□□□□ -1.65
VPS13D-214ENST00000620676 SIX4Q9UIU6 781 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 DIMT1Q9UNQ2 313 aaKnown RBP4.76□□□□□ -1.65
VPS13D-214ENST00000620676 MMP24Q9Y5R2 645 aa4.76□□□□□ -1.65
VPS13D-214ENST00000620676 ZCCHC11Q5TAX3 1644 aaKnown RBP4.76□□□□□ -1.65
VPS13D-214ENST00000620676 ENPP2Q13822 863 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 ST3GAL2Q16842 350 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 RPL13AP3Q6NVV1 102 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 PODNL1Q6PEZ8 512 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 LINC00469Q8N7U9 141 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 MALSU1Q96EH3 234 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 APIPQ96GX9 242 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 PCED1BQ96HM7 432 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 DERL2Q9GZP9 239 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 FAM183AA6NL82 134 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 ZNF195O14628 629 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 ZNF821O75541 412 aaPredicted RBP4.75□□□□□ -1.65
VPS13D-214ENST00000620676 USP2O75604 605 aaPredicted RBP4.75□□□□□ -1.65
VPS13D-214ENST00000620676 CLDN7O95471 211 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 RAB3DO95716 219 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 BPNT1O95861 308 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 ANKRD34CP0C6C1 535 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 S100A11P31949 105 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 RBMXP38159 391 aaKnown RBP4.75□□□□□ -1.65
VPS13D-214ENST00000620676 GUCA1AP43080 201 aaPredicted RBP4.75□□□□□ -1.65
VPS13D-214ENST00000620676 CPT1AP50416 773 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 DLX5P56178 289 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 FAM109BQ6ICB4 259 aaPredicted RBP4.75□□□□□ -1.65
VPS13D-214ENST00000620676 C9orf62Q8N4C0 152 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 NLGN2Q8NFZ4 835 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 OR4C5Q8NGB2 326 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 OR13C3Q8NGS6 347 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 KLK6Q92876 244 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 ARSGQ96EG1 525 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 CDKN2AIPNLQ96HQ2 116 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 264.1 ms