RNA–Protein interactions for RNA: ENST00000619079.1

UPF3A-212, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-212ENST00000619079 ARF5P84085 180 aa10.14□□□□□ -0.79
UPF3A-212ENST00000619079 TAF10Q12962 218 aa10.14□□□□□ -0.79
UPF3A-212ENST00000619079 VASNQ6EMK4 673 aa10.14□□□□□ -0.79
UPF3A-212ENST00000619079 ZNF322Q6U7Q0 402 aaPredicted RBP10.14□□□□□ -0.79
UPF3A-212ENST00000619079 IL20RBQ6UXL0 311 aa10.14□□□□□ -0.79
UPF3A-212ENST00000619079 B3GLCTQ6Y288 498 aa10.14□□□□□ -0.79
UPF3A-212ENST00000619079 ZER1Q7Z7L7 766 aa10.14□□□□□ -0.79
UPF3A-212ENST00000619079 SLC38A5Q8WUX1 472 aa10.14□□□□□ -0.79
UPF3A-212ENST00000619079 SPRYD4Q8WW59 207 aaPredicted RBP10.14□□□□□ -0.79
UPF3A-212ENST00000619079 CDX2Q99626 313 aaPredicted RBP10.14□□□□□ -0.79
UPF3A-212ENST00000619079 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.14□□□□□ -0.79
UPF3A-212ENST00000619079 DNTTIP1Q9H147 329 aa10.14□□□□□ -0.79
UPF3A-212ENST00000619079 SLC35C2Q9NQQ7 365 aa10.14□□□□□ -0.79
UPF3A-212ENST00000619079 MGAT4CQ9UBM8 478 aa10.14□□□□□ -0.79
UPF3A-212ENST00000619079 MLXQ9UH92 298 aa10.14□□□□□ -0.79
UPF3A-212ENST00000619079 FBXL2Q9UKC9 423 aa10.14□□□□□ -0.79
UPF3A-212ENST00000619079 CA5BQ9Y2D0 317 aa10.14□□□□□ -0.79
UPF3A-212ENST00000619079 MYO7AQ13402 2215 aa10.14□□□□□ -0.79
UPF3A-212ENST00000619079 PRUNE2Q8WUY3 3088 aa10.14□□□□□ -0.79
UPF3A-212ENST00000619079 PQLC2LA1A4F0 135 aa10.13□□□□□ -0.79
UPF3A-212ENST00000619079 TRABD2BA6NFA1 517 aa10.13□□□□□ -0.79
UPF3A-212ENST00000619079 OR6C75A6NL08 312 aa10.13□□□□□ -0.79
UPF3A-212ENST00000619079 HMSDA8MTL9 139 aa10.13□□□□□ -0.79
UPF3A-212ENST00000619079 PGRMC2O15173 223 aa10.13□□□□□ -0.79
UPF3A-212ENST00000619079 MT-ND4P03905 459 aa10.13□□□□□ -0.79
UPF3A-212ENST00000619079 ATP6V1E1P36543 226 aa10.13□□□□□ -0.79
UPF3A-212ENST00000619079 RPL35P42766 123 aaKnown RBP10.13□□□□□ -0.79
UPF3A-212ENST00000619079 MAPK9P45984 424 aa10.13□□□□□ -0.79
UPF3A-212ENST00000619079 SLC6A11P48066 632 aa10.13□□□□□ -0.79
UPF3A-212ENST00000619079 AP3S2P59780 193 aa10.13□□□□□ -0.79
UPF3A-212ENST00000619079 KLF9Q13886 244 aaPredicted RBP10.13□□□□□ -0.79
UPF3A-212ENST00000619079 INSL4Q14641 139 aa10.13□□□□□ -0.79
UPF3A-212ENST00000619079 HLXQ14774 488 aaPredicted RBP10.13□□□□□ -0.79
UPF3A-212ENST00000619079 RNF219Q5W0B1 726 aaPredicted RBP10.13□□□□□ -0.79
UPF3A-212ENST00000619079 CXorf57Q6NSI4 855 aaKnown RBP10.13□□□□□ -0.79
UPF3A-212ENST00000619079 KIAA1161Q6NSJ0 714 aa10.13□□□□□ -0.79
UPF3A-212ENST00000619079 ALKAL2Q6UX46 152 aa10.13□□□□□ -0.79
UPF3A-212ENST00000619079 ZNF783Q6ZMS7 281 aa10.13□□□□□ -0.79
UPF3A-212ENST00000619079 TPGS1Q6ZTW0 290 aa10.13□□□□□ -0.79
UPF3A-212ENST00000619079 SHFQ7M4L6 423 aa10.13□□□□□ -0.79
UPF3A-212ENST00000619079 METTL3Q86U44 580 aaKnown RBP10.13□□□□□ -0.79
UPF3A-212ENST00000619079 TSPAN33Q86UF1 283 aa10.13□□□□□ -0.79
UPF3A-212ENST00000619079 KLBQ86Z14 1044 aa10.13□□□□□ -0.79
UPF3A-212ENST00000619079 OR6V1Q8N148 313 aa10.13□□□□□ -0.79
UPF3A-212ENST00000619079 FAM98AQ8NCA5 519 aaKnown RBP10.13□□□□□ -0.79
UPF3A-212ENST00000619079 RGMAQ96B86 450 aa10.13□□□□□ -0.79
UPF3A-212ENST00000619079 TMEM19Q96HH6 336 aa10.13□□□□□ -0.79
UPF3A-212ENST00000619079 CHIAQ9BZP6 476 aa10.13□□□□□ -0.79
UPF3A-212ENST00000619079 ABCG4Q9H172 646 aa10.13□□□□□ -0.79
UPF3A-212ENST00000619079 GPN1Q9HCN4 374 aaPredicted RBP10.13□□□□□ -0.79
UPF3A-212ENST00000619079 MED17Q9NVC6 651 aa10.13□□□□□ -0.79
UPF3A-212ENST00000619079 A4GNTQ9UNA3 340 aa10.13□□□□□ -0.79
UPF3A-212ENST00000619079 ZNF197O14709 1029 aa10.13□□□□□ -0.79
UPF3A-212ENST00000619079 SERPIND1P05546 499 aa10.13□□□□□ -0.79
UPF3A-212ENST00000619079 H2AFB1P0C5Y9 115 aa10.13□□□□□ -0.79
UPF3A-212ENST00000619079 SAGP10523 405 aaPredicted RBP10.13□□□□□ -0.79
UPF3A-212ENST00000619079 RORAP35398 523 aa10.13□□□□□ -0.79
UPF3A-212ENST00000619079 OPRD1P41143 372 aa10.13□□□□□ -0.79
UPF3A-212ENST00000619079 STAT5AP42229 794 aa10.13□□□□□ -0.79
UPF3A-212ENST00000619079 ZNF791Q3KP31 576 aaPredicted RBP10.13□□□□□ -0.79
UPF3A-212ENST00000619079 TCEAL5Q5H9L2 206 aa10.13□□□□□ -0.79
UPF3A-212ENST00000619079 RPS26P11Q5JNZ5 115 aaPredicted RBP10.13□□□□□ -0.79
UPF3A-212ENST00000619079 ELFN2Q5R3F8 820 aa10.13□□□□□ -0.79
UPF3A-212ENST00000619079 SLC9B2Q86UD5 537 aa10.13□□□□□ -0.79
UPF3A-212ENST00000619079 IQCHQ86VS3 1027 aa10.13□□□□□ -0.79
UPF3A-212ENST00000619079 HORMAD2Q8N7B1 307 aa10.13□□□□□ -0.79
UPF3A-212ENST00000619079 TMIEQ8NEW7 156 aa10.13□□□□□ -0.79
UPF3A-212ENST00000619079 OR1S1Q8NH92 325 aa10.13□□□□□ -0.79
UPF3A-212ENST00000619079 KAT2AQ92830 837 aa10.13□□□□□ -0.79
UPF3A-212ENST00000619079 ELP4Q96EB1 424 aa10.13□□□□□ -0.79
UPF3A-212ENST00000619079 NEURL3Q96EH8 262 aa10.13□□□□□ -0.79
UPF3A-212ENST00000619079 LRRC46Q96FV0 321 aa10.13□□□□□ -0.79
UPF3A-212ENST00000619079 MVB12BQ9H7P6 319 aa10.13□□□□□ -0.79
UPF3A-212ENST00000619079 NANSQ9NR45 359 aa10.13□□□□□ -0.79
UPF3A-212ENST00000619079 NLGN3Q9NZ94 848 aa10.13□□□□□ -0.79
UPF3A-212ENST00000619079 CAMK2AQ9UQM7 478 aa10.13□□□□□ -0.79
UPF3A-212ENST00000619079 GPR52Q9Y2T5 361 aa10.13□□□□□ -0.79
UPF3A-212ENST00000619079 SLC6A5Q9Y345 797 aa10.13□□□□□ -0.79
UPF3A-212ENST00000619079 NPFFR2Q9Y5X5 522 aa10.13□□□□□ -0.79
UPF3A-212ENST00000619079 BACE2Q9Y5Z0 518 aa10.13□□□□□ -0.79
UPF3A-212ENST00000619079 IRAK3Q9Y616 596 aa10.13□□□□□ -0.79
UPF3A-212ENST00000619079 MTCH2Q9Y6C9 303 aa10.13□□□□□ -0.79
UPF3A-212ENST00000619079 ZNF106Q9H2Y7 1883 aaKnown RBP10.13□□□□□ -0.79
UPF3A-212ENST00000619079 PIKFYVEQ9Y2I7 2098 aa10.12□□□□□ -0.79
UPF3A-212ENST00000619079 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.12□□□□□ -0.79
UPF3A-212ENST00000619079 TCRBV16S1A1N1A0A5B0 115 aa10.12□□□□□ -0.79
UPF3A-212ENST00000619079 SLC9B1P1A6NJY1 282 aa10.12□□□□□ -0.79
UPF3A-212ENST00000619079 ANXA2P2A6NMY6 339 aa10.12□□□□□ -0.79
UPF3A-212ENST00000619079 ADAM12O43184 909 aa10.12□□□□□ -0.79
UPF3A-212ENST00000619079 SULT1B1O43704 296 aa10.12□□□□□ -0.79
UPF3A-212ENST00000619079 SUSD5O60279 629 aa10.12□□□□□ -0.79
UPF3A-212ENST00000619079 GALR3O60755 368 aaPredicted RBP10.12□□□□□ -0.79
UPF3A-212ENST00000619079 STX11O75558 287 aa10.12□□□□□ -0.79
UPF3A-212ENST00000619079 AQP8O94778 261 aa10.12□□□□□ -0.79
UPF3A-212ENST00000619079 OR2A4O95047 310 aa10.12□□□□□ -0.79
UPF3A-212ENST00000619079 CLDN7O95471 211 aa10.12□□□□□ -0.79
UPF3A-212ENST00000619079 ECDO95905 644 aaPredicted RBP10.12□□□□□ -0.79
UPF3A-212ENST00000619079 GABRA1P14867 456 aa10.12□□□□□ -0.79
UPF3A-212ENST00000619079 IFNGR1P15260 489 aa10.12□□□□□ -0.79
UPF3A-212ENST00000619079 FOSL1P15407 271 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms