RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 NRROSQ86YC3 692 aa11□□□□□ -0.65
C11orf54-215ENST00000617482 YIPF7Q8N8F6 280 aa11□□□□□ -0.65
C11orf54-215ENST00000617482 SRFBP1Q8NEF9 429 aaKnown RBP11□□□□□ -0.65
C11orf54-215ENST00000617482 NECTIN4Q96NY8 510 aa11□□□□□ -0.65
C11orf54-215ENST00000617482 DPH1Q9BZG8 443 aa11□□□□□ -0.65
C11orf54-215ENST00000617482 UBQLN3Q9H347 655 aa11□□□□□ -0.65
C11orf54-215ENST00000617482 ANKRD19PQ9H560 264 aa11□□□□□ -0.65
C11orf54-215ENST00000617482 MTHFD2LQ9H903 347 aaPredicted RBP11□□□□□ -0.65
C11orf54-215ENST00000617482 RBFOX1Q9NWB1 397 aaKnown RBP11□□□□□ -0.65
C11orf54-215ENST00000617482 WDR45Q9Y484 360 aa11□□□□□ -0.65
C11orf54-215ENST00000617482 ALG5Q9Y673 324 aa11□□□□□ -0.65
C11orf54-215ENST00000617482 SIRT4Q9Y6E7 314 aaPredicted RBP11□□□□□ -0.65
C11orf54-215ENST00000617482 A0A1B0GVC2 190 aa10.99□□□□□ -0.65
C11orf54-215ENST00000617482 SYNDIG1LA6NDD5 238 aa10.99□□□□□ -0.65
C11orf54-215ENST00000617482 A6NIN4 97 aa10.99□□□□□ -0.65
C11orf54-215ENST00000617482 C12orf71A8MTZ7 269 aa10.99□□□□□ -0.65
C11orf54-215ENST00000617482 GPR89AB7ZAQ6 455 aa10.99□□□□□ -0.65
C11orf54-215ENST00000617482 BTN3A3O00478 584 aa10.99□□□□□ -0.65
C11orf54-215ENST00000617482 KLF4O43474 513 aa10.99□□□□□ -0.65
C11orf54-215ENST00000617482 SCO2O43819 266 aa10.99□□□□□ -0.65
C11orf54-215ENST00000617482 HCN1O60741 890 aa10.99□□□□□ -0.65
C11orf54-215ENST00000617482 IGHA1P01876 353 aa10.99□□□□□ -0.65
C11orf54-215ENST00000617482 GPR89BP0CG08 455 aa10.99□□□□□ -0.65
C11orf54-215ENST00000617482 PRKAR1AP10644 381 aa10.99□□□□□ -0.65
C11orf54-215ENST00000617482 ALAS2P22557 587 aa10.99□□□□□ -0.65
C11orf54-215ENST00000617482 CMPK1P30085 196 aa10.99□□□□□ -0.65
C11orf54-215ENST00000617482 INPP1P49441 399 aa10.99□□□□□ -0.65
C11orf54-215ENST00000617482 ABATP80404 500 aa10.99□□□□□ -0.65
C11orf54-215ENST00000617482 SIM1P81133 766 aaPredicted RBP10.99□□□□□ -0.65
C11orf54-215ENST00000617482 CSTF1Q05048 431 aaKnown RBP10.99□□□□□ -0.65
C11orf54-215ENST00000617482 IDNKQ5T6J7 187 aa10.99□□□□□ -0.65
C11orf54-215ENST00000617482 THOC7Q6I9Y2 204 aaKnown RBP10.99□□□□□ -0.65
C11orf54-215ENST00000617482 MFSD12Q6NUT3 480 aa10.99□□□□□ -0.65
C11orf54-215ENST00000617482 MZT2BQ6NZ67 158 aa10.99□□□□□ -0.65
C11orf54-215ENST00000617482 NR2C2APQ86WQ0 139 aa10.99□□□□□ -0.65
C11orf54-215ENST00000617482 PEX5LQ8IYB4 626 aa10.99□□□□□ -0.65
C11orf54-215ENST00000617482 SHISA5Q8N114 240 aa10.99□□□□□ -0.65
C11orf54-215ENST00000617482 MFSD9Q8NBP5 474 aa10.99□□□□□ -0.65
C11orf54-215ENST00000617482 NR4A3Q92570 626 aa10.99□□□□□ -0.65
C11orf54-215ENST00000617482 GFM1Q96RP9 751 aaKnown RBP10.99□□□□□ -0.65
C11orf54-215ENST00000617482 TIMM29Q9BSF4 260 aa10.99□□□□□ -0.65
C11orf54-215ENST00000617482 WACQ9BTA9 647 aa10.99□□□□□ -0.65
C11orf54-215ENST00000617482 TMEM43Q9BTV4 400 aa10.99□□□□□ -0.65
C11orf54-215ENST00000617482 PCDHGB7Q9Y5F8 929 aa10.99□□□□□ -0.65
C11orf54-215ENST00000617482 SNRNP200O75643 2136 aaKnown RBP10.99□□□□□ -0.65
C11orf54-215ENST00000617482 LINC01553A4QN01 128 aa10.99□□□□□ -0.65
C11orf54-215ENST00000617482 DUXAA6NLW8 204 aa10.99□□□□□ -0.65
C11orf54-215ENST00000617482 EML2O95834 649 aa10.99□□□□□ -0.65
C11orf54-215ENST00000617482 ZGLP1P0C6A0 271 aa10.99□□□□□ -0.65
C11orf54-215ENST00000617482 ID2Q02363 134 aa10.99□□□□□ -0.65
C11orf54-215ENST00000617482 EIF2B5Q13144 721 aaKnown RBP10.99□□□□□ -0.65
C11orf54-215ENST00000617482 CEBPEQ15744 281 aa10.99□□□□□ -0.65
C11orf54-215ENST00000617482 DUSP5Q16690 384 aa10.99□□□□□ -0.65
C11orf54-215ENST00000617482 KLHL12Q53G59 568 aa10.99□□□□□ -0.65
C11orf54-215ENST00000617482 C2orf27AQ580R0 203 aa10.99□□□□□ -0.65
C11orf54-215ENST00000617482 ZNF57Q68EA5 555 aaPredicted RBP10.99□□□□□ -0.65
C11orf54-215ENST00000617482 MZT2AQ6P582 158 aa10.99□□□□□ -0.65
C11orf54-215ENST00000617482 IL20RBQ6UXL0 311 aa10.99□□□□□ -0.65
C11orf54-215ENST00000617482 ZNF836Q6ZNA1 936 aa10.99□□□□□ -0.65
C11orf54-215ENST00000617482 OR52N1Q8NH53 320 aa10.99□□□□□ -0.65
C11orf54-215ENST00000617482 OR14C36Q8NHC7 312 aa10.99□□□□□ -0.65
C11orf54-215ENST00000617482 ZCCHC10Q8TBK6 192 aa10.99□□□□□ -0.65
C11orf54-215ENST00000617482 SP7Q8TDD2 431 aaPredicted RBP10.99□□□□□ -0.65
C11orf54-215ENST00000617482 BADQ92934 168 aa10.99□□□□□ -0.65
C11orf54-215ENST00000617482 UPRTQ96BW1 309 aa10.99□□□□□ -0.65
C11orf54-215ENST00000617482 HCAR1Q9BXC0 346 aa10.99□□□□□ -0.65
C11orf54-215ENST00000617482 SLC6A17Q9H1V8 727 aa10.99□□□□□ -0.65
C11orf54-215ENST00000617482 PPIL3Q9H2H8 161 aaKnown RBP10.99□□□□□ -0.65
C11orf54-215ENST00000617482 TRIM45Q9H8W5 580 aaPredicted RBP10.99□□□□□ -0.65
C11orf54-215ENST00000617482 ATP13A2Q9NQ11 1180 aa10.99□□□□□ -0.65
C11orf54-215ENST00000617482 PRKAG2Q9UGJ0 569 aa10.99□□□□□ -0.65
C11orf54-215ENST00000617482 CDH10Q9Y6N8 788 aa10.99□□□□□ -0.65
C11orf54-215ENST00000617482 A0A1W2PQU0 124 aa10.98□□□□□ -0.65
C11orf54-215ENST00000617482 SLC31A1O15431 190 aa10.98□□□□□ -0.65
C11orf54-215ENST00000617482 RNF13O43567 381 aa10.98□□□□□ -0.65
C11orf54-215ENST00000617482 REM1O75628 298 aa10.98□□□□□ -0.65
C11orf54-215ENST00000617482 OR5F1O95221 314 aa10.98□□□□□ -0.65
C11orf54-215ENST00000617482 HMGN1P05114 100 aa10.98□□□□□ -0.65
C11orf54-215ENST00000617482 CHRNB1P11230 501 aa10.98□□□□□ -0.65
C11orf54-215ENST00000617482 ELK1P19419 428 aa10.98□□□□□ -0.65
C11orf54-215ENST00000617482 PAICSP22234 425 aaKnown RBP10.98□□□□□ -0.65
C11orf54-215ENST00000617482 HLA-DMAP28067 261 aa10.98□□□□□ -0.65
C11orf54-215ENST00000617482 SLC16A1P53985 500 aa10.98□□□□□ -0.65
C11orf54-215ENST00000617482 RUNX3Q13761 415 aa10.98□□□□□ -0.65
C11orf54-215ENST00000617482 DEFB134Q4QY38 66 aa10.98□□□□□ -0.65
C11orf54-215ENST00000617482 FAM27D1Q5T7N8 215 aa10.98□□□□□ -0.65
C11orf54-215ENST00000617482 HEPHL1Q6MZM0 1159 aa10.98□□□□□ -0.65
C11orf54-215ENST00000617482 SYCE2Q6PIF2 218 aa10.98□□□□□ -0.65
C11orf54-215ENST00000617482 WDR88Q6ZMY6 472 aa10.98□□□□□ -0.65
C11orf54-215ENST00000617482 VN1R4Q7Z5H5 301 aa10.98□□□□□ -0.65
C11orf54-215ENST00000617482 LRRC25Q8N386 305 aaPredicted RBP10.98□□□□□ -0.65
C11orf54-215ENST00000617482 ACBD7Q8N6N7 88 aa10.98□□□□□ -0.65
C11orf54-215ENST00000617482 TMEM99Q8N816 258 aa10.98□□□□□ -0.65
C11orf54-215ENST00000617482 PFN4Q8NHR9 129 aa10.98□□□□□ -0.65
C11orf54-215ENST00000617482 SMAP2Q8WU79 429 aaPredicted RBP10.98□□□□□ -0.65
C11orf54-215ENST00000617482 LCN9Q8WX39 176 aa10.98□□□□□ -0.65
C11orf54-215ENST00000617482 C10orf90Q96M02 699 aa10.98□□□□□ -0.65
C11orf54-215ENST00000617482 COQ7Q99807 217 aa10.98□□□□□ -0.65
C11orf54-215ENST00000617482 OR52D1Q9H346 318 aa10.98□□□□□ -0.65
C11orf54-215ENST00000617482 C20orf141Q9NUB4 165 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms