RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 SMIM24O75264 130 aa15.29■□□□□ 0.04
CSNK1E-215ENST00000612795 UTS2O95399 124 aa15.29■□□□□ 0.04
CSNK1E-215ENST00000612795 SLC25A16P16260 332 aa15.29■□□□□ 0.04
CSNK1E-215ENST00000612795 PTNP21246 168 aa15.29■□□□□ 0.04
CSNK1E-215ENST00000612795 TYK2P29597 1187 aa15.29■□□□□ 0.04
CSNK1E-215ENST00000612795 SERPINB8P50452 374 aa15.29■□□□□ 0.04
CSNK1E-215ENST00000612795 MRPS25P82663 173 aaKnown RBP15.29■□□□□ 0.04
CSNK1E-215ENST00000612795 STK11Q15831 433 aa15.29■□□□□ 0.04
CSNK1E-215ENST00000612795 LETMD1Q6P1Q0 360 aa15.29■□□□□ 0.04
CSNK1E-215ENST00000612795 RPS27LQ71UM5 84 aaKnown RBP15.29■□□□□ 0.04
CSNK1E-215ENST00000612795 GTPBP8Q8N3Z3 284 aaPredicted RBP15.29■□□□□ 0.04
CSNK1E-215ENST00000612795 ABHD3Q8WU67 409 aa15.29■□□□□ 0.04
CSNK1E-215ENST00000612795 ZBTB8AQ96BR9 441 aa15.29■□□□□ 0.04
CSNK1E-215ENST00000612795 RNF145Q96MT1 663 aa15.29■□□□□ 0.04
CSNK1E-215ENST00000612795 GPR78Q96P69 363 aa15.29■□□□□ 0.04
CSNK1E-215ENST00000612795 USB1Q9BQ65 265 aaKnown RBP15.29■□□□□ 0.04
CSNK1E-215ENST00000612795 MANSC1Q9H8J5 431 aa15.29■□□□□ 0.04
CSNK1E-215ENST00000612795 DDX18Q9NVP1 670 aaKnown RBP15.29■□□□□ 0.04
CSNK1E-215ENST00000612795 NFU1Q9UMS0 254 aa15.29■□□□□ 0.04
CSNK1E-215ENST00000612795 A0A087WV62 115 aa15.28■□□□□ 0.04
CSNK1E-215ENST00000612795 A0A0J9YW62 118 aa15.28■□□□□ 0.04
CSNK1E-215ENST00000612795 LMX1BO60663 402 aa15.28■□□□□ 0.04
CSNK1E-215ENST00000612795 NTN1O95631 604 aa15.28■□□□□ 0.04
CSNK1E-215ENST00000612795 ADAP00813 363 aa15.28■□□□□ 0.04
CSNK1E-215ENST00000612795 TSPAN8P19075 237 aa15.28■□□□□ 0.04
CSNK1E-215ENST00000612795 ZNF41P51814 821 aaPredicted RBP15.28■□□□□ 0.04
CSNK1E-215ENST00000612795 RAC1P63000 192 aa15.28■□□□□ 0.04
CSNK1E-215ENST00000612795 IRX1P78414 480 aaPredicted RBP15.28■□□□□ 0.04
CSNK1E-215ENST00000612795 PRR5P85299 388 aa15.28■□□□□ 0.04
CSNK1E-215ENST00000612795 CSTF3Q12996 717 aaKnown RBP15.28■□□□□ 0.04
CSNK1E-215ENST00000612795 RNPS1Q15287 305 aaKnown RBP15.28■□□□□ 0.04
CSNK1E-215ENST00000612795 UAP1Q16222 522 aaPredicted RBP15.28■□□□□ 0.04
CSNK1E-215ENST00000612795 GRAMD1BQ3KR37 738 aa15.28■□□□□ 0.04
CSNK1E-215ENST00000612795 TMEM107Q6UX40 140 aa15.28■□□□□ 0.04
CSNK1E-215ENST00000612795 BHLHA15Q7RTS1 189 aaPredicted RBP15.28■□□□□ 0.04
CSNK1E-215ENST00000612795 NUFIP2Q7Z417 695 aaKnown RBP15.28■□□□□ 0.04
CSNK1E-215ENST00000612795 CREG2Q8IUH2 290 aa15.28■□□□□ 0.04
CSNK1E-215ENST00000612795 RNF128Q8TEB7 428 aa15.28■□□□□ 0.04
CSNK1E-215ENST00000612795 ROBO4Q8WZ75 1007 aa15.28■□□□□ 0.04
CSNK1E-215ENST00000612795 SHCBP1LQ9BZQ2 653 aa15.28■□□□□ 0.04
CSNK1E-215ENST00000612795 CHODLQ9H9P2 273 aa15.28■□□□□ 0.04
CSNK1E-215ENST00000612795 C3orf14Q9HBI5 128 aa15.28■□□□□ 0.04
CSNK1E-215ENST00000612795 KLHL13Q9P2N7 655 aa15.28■□□□□ 0.04
CSNK1E-215ENST00000612795 SVEP1Q4LDE5 3571 aa15.28■□□□□ 0.04
CSNK1E-215ENST00000612795 ELOA3DA6NLF2 546 aaPredicted RBP15.27■□□□□ 0.04
CSNK1E-215ENST00000612795 SHISA9B4DS77 424 aa15.27■□□□□ 0.04
CSNK1E-215ENST00000612795 ABCD4O14678 606 aa15.27■□□□□ 0.04
CSNK1E-215ENST00000612795 SLITRK5O94991 958 aa15.27■□□□□ 0.04
CSNK1E-215ENST00000612795 KCNH1O95259 989 aa15.27■□□□□ 0.04
CSNK1E-215ENST00000612795 JUNP05412 331 aaKnown RBP15.27■□□□□ 0.04
CSNK1E-215ENST00000612795 RBP1P09455 135 aa15.27■□□□□ 0.04
CSNK1E-215ENST00000612795 PAFAH1B1P43034 410 aa15.27■□□□□ 0.04
CSNK1E-215ENST00000612795 NCBP2P52298 156 aaKnown RBP eCLIP15.27■□□□□ 0.04
CSNK1E-215ENST00000612795 ITGADQ13349 1161 aa15.27■□□□□ 0.04
CSNK1E-215ENST00000612795 P2RY6Q15077 328 aa15.27■□□□□ 0.04
CSNK1E-215ENST00000612795 PPA1Q15181 289 aa15.27■□□□□ 0.04
CSNK1E-215ENST00000612795 ZNF239Q16600 458 aaKnown RBP15.27■□□□□ 0.04
CSNK1E-215ENST00000612795 ELOA3BQ3SY89 546 aa15.27■□□□□ 0.04
CSNK1E-215ENST00000612795 FAM219BQ5XKK7 198 aa15.27■□□□□ 0.04
CSNK1E-215ENST00000612795 SEZ6L2Q6UXD5 910 aa15.27■□□□□ 0.04
CSNK1E-215ENST00000612795 IL17RELQ6ZVW7 336 aa15.27■□□□□ 0.04
CSNK1E-215ENST00000612795 PLD6Q8N2A8 252 aaKnown RBP15.27■□□□□ 0.04
CSNK1E-215ENST00000612795 ZNF525Q8N782 197 aa15.27■□□□□ 0.04
CSNK1E-215ENST00000612795 ARIH2OSQ8N7S6 290 aa15.27■□□□□ 0.04
CSNK1E-215ENST00000612795 CDYL2Q8N8U2 506 aa15.27■□□□□ 0.04
CSNK1E-215ENST00000612795 ELOA3Q8NG57 546 aa15.27■□□□□ 0.04
CSNK1E-215ENST00000612795 CDC26Q8NHZ8 85 aa15.27■□□□□ 0.04
CSNK1E-215ENST00000612795 FAM168AQ92567 244 aa15.27■□□□□ 0.04
CSNK1E-215ENST00000612795 OSTF1Q92882 214 aa15.27■□□□□ 0.04
CSNK1E-215ENST00000612795 CPNE4Q96A23 557 aaPredicted RBP15.27■□□□□ 0.04
CSNK1E-215ENST00000612795 KLHL15Q96M94 604 aa15.27■□□□□ 0.04
CSNK1E-215ENST00000612795 HHATLQ9HCP6 504 aa15.27■□□□□ 0.04
CSNK1E-215ENST00000612795 RNF14Q9UBS8 474 aa15.27■□□□□ 0.04
CSNK1E-215ENST00000612795 KCNS2Q9ULS6 477 aa15.27■□□□□ 0.04
CSNK1E-215ENST00000612795 A0A1W2PRB8 838 aa15.26■□□□□ 0.03
CSNK1E-215ENST00000612795 ZSCAN12O43309 604 aa15.26■□□□□ 0.03
CSNK1E-215ENST00000612795 WIPF1O43516 503 aa15.26■□□□□ 0.03
CSNK1E-215ENST00000612795 OR4F21O95013 312 aa15.26■□□□□ 0.03
CSNK1E-215ENST00000612795 KRT6AP02538 564 aa15.26■□□□□ 0.03
CSNK1E-215ENST00000612795 KRT6BP04259 564 aa15.26■□□□□ 0.03
CSNK1E-215ENST00000612795 RPS17P08708 135 aaKnown RBP15.26■□□□□ 0.03
CSNK1E-215ENST00000612795 IGHV4-31P0DP07 118 aa15.26■□□□□ 0.03
CSNK1E-215ENST00000612795 HSD3B1P14060 373 aa15.26■□□□□ 0.03
CSNK1E-215ENST00000612795 IGFBP5P24593 272 aa15.26■□□□□ 0.03
CSNK1E-215ENST00000612795 HSD3B2P26439 372 aa15.26■□□□□ 0.03
CSNK1E-215ENST00000612795 SFTPDP35247 375 aa15.26■□□□□ 0.03
CSNK1E-215ENST00000612795 MAGEA4P43358 317 aa15.26■□□□□ 0.03
CSNK1E-215ENST00000612795 KRT6CP48668 564 aa15.26■□□□□ 0.03
CSNK1E-215ENST00000612795 CDH13P55290 713 aa15.26■□□□□ 0.03
CSNK1E-215ENST00000612795 CARD18P57730 90 aa15.26■□□□□ 0.03
CSNK1E-215ENST00000612795 RUNX1T1Q06455 604 aa15.26■□□□□ 0.03
CSNK1E-215ENST00000612795 ACSM2AQ08AH3 577 aa15.26■□□□□ 0.03
CSNK1E-215ENST00000612795 RAB35Q15286 201 aa15.26■□□□□ 0.03
CSNK1E-215ENST00000612795 PLPPR5Q32ZL2 321 aa15.26■□□□□ 0.03
CSNK1E-215ENST00000612795 SPIN4Q56A73 249 aa15.26■□□□□ 0.03
CSNK1E-215ENST00000612795 TCHHL1Q5QJ38 904 aaPredicted RBP15.26■□□□□ 0.03
CSNK1E-215ENST00000612795 ACSM2BQ68CK6 577 aa15.26■□□□□ 0.03
CSNK1E-215ENST00000612795 APOOLQ6UXV4 268 aa15.26■□□□□ 0.03
CSNK1E-215ENST00000612795 TDRPQ86YL5 185 aa15.26■□□□□ 0.03
CSNK1E-215ENST00000612795 TUSC5Q8IXB3 177 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms