RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 F8A1P23610 371 aa6.81□□□□□ -1.32
CSDE1-218ENST00000610726 FAUP35544 74 aaKnown RBP6.81□□□□□ -1.32
CSDE1-218ENST00000610726 KCNJ5P48544 419 aa6.81□□□□□ -1.32
CSDE1-218ENST00000610726 TMBIM6P55061 237 aa6.81□□□□□ -1.32
CSDE1-218ENST00000610726 MAD2L1BPQ15013 274 aaPredicted RBP6.81□□□□□ -1.32
CSDE1-218ENST00000610726 SMAD2Q15796 467 aaKnown RBP6.81□□□□□ -1.32
CSDE1-218ENST00000610726 C14orf28Q4W4Y0 310 aa6.81□□□□□ -1.32
CSDE1-218ENST00000610726 TRMT12Q53H54 448 aaKnown RBP6.81□□□□□ -1.32
CSDE1-218ENST00000610726 ARHGAP11AQ6P4F7 1023 aa6.81□□□□□ -1.32
CSDE1-218ENST00000610726 TBPL2Q6SJ96 375 aa6.81□□□□□ -1.32
CSDE1-218ENST00000610726 PAMR1Q6UXH9 720 aa6.81□□□□□ -1.32
CSDE1-218ENST00000610726 DGLUCYQ7Z3D6 616 aa6.81□□□□□ -1.32
CSDE1-218ENST00000610726 GALNTL5Q7Z4T8 443 aa6.81□□□□□ -1.32
CSDE1-218ENST00000610726 PTRH1Q86Y79 214 aaKnown RBP6.81□□□□□ -1.32
CSDE1-218ENST00000610726 SNX29P2Q8IUI4 249 aa6.81□□□□□ -1.32
CSDE1-218ENST00000610726 ZNF595Q8IYB9 648 aa6.81□□□□□ -1.32
CSDE1-218ENST00000610726 TMEM151AQ8N4L1 468 aa6.81□□□□□ -1.32
CSDE1-218ENST00000610726 DTX3Q8N9I9 347 aa6.81□□□□□ -1.32
CSDE1-218ENST00000610726 AGBL5Q8NDL9 886 aa6.81□□□□□ -1.32
CSDE1-218ENST00000610726 THAP4Q8WY91 577 aa6.81□□□□□ -1.32
CSDE1-218ENST00000610726 BPIFA2Q96DR5 249 aa6.81□□□□□ -1.32
CSDE1-218ENST00000610726 ZMYND19Q96E35 227 aaPredicted RBP6.81□□□□□ -1.32
CSDE1-218ENST00000610726 WDR77Q9BQA1 342 aaPredicted RBP6.81□□□□□ -1.32
CSDE1-218ENST00000610726 BTBD2Q9BX70 525 aa6.81□□□□□ -1.32
CSDE1-218ENST00000610726 CLEC4MQ9H2X3 399 aaPredicted RBP6.81□□□□□ -1.32
CSDE1-218ENST00000610726 TIGARQ9NQ88 270 aa6.81□□□□□ -1.32
CSDE1-218ENST00000610726 HPF1Q9NWY4 346 aa6.81□□□□□ -1.32
CSDE1-218ENST00000610726 IER3IP1Q9Y5U9 82 aa6.81□□□□□ -1.32
CSDE1-218ENST00000610726 IGLV3-16A0A075B6K0 115 aa6.81□□□□□ -1.32
CSDE1-218ENST00000610726 TRAV27A0A087WT01 109 aa6.81□□□□□ -1.32
CSDE1-218ENST00000610726 NOS1APO75052 506 aaPredicted RBP6.81□□□□□ -1.32
CSDE1-218ENST00000610726 NDUFB2O95178 105 aa6.81□□□□□ -1.32
CSDE1-218ENST00000610726 IL33O95760 270 aa6.81□□□□□ -1.32
CSDE1-218ENST00000610726 P04436 131 aa6.81□□□□□ -1.32
CSDE1-218ENST00000610726 UBL4AP11441 157 aa6.81□□□□□ -1.32
CSDE1-218ENST00000610726 MYF5P13349 255 aa6.81□□□□□ -1.32
CSDE1-218ENST00000610726 C4BPBP20851 252 aa6.81□□□□□ -1.32
CSDE1-218ENST00000610726 ANKDD1AQ495B1 522 aa6.81□□□□□ -1.32
CSDE1-218ENST00000610726 TLDC1Q6P9B6 456 aa6.81□□□□□ -1.32
CSDE1-218ENST00000610726 TMEM92Q6UXU6 159 aa6.81□□□□□ -1.32
CSDE1-218ENST00000610726 ZNF367Q7RTV3 350 aa6.81□□□□□ -1.32
CSDE1-218ENST00000610726 PRSS48Q7RTY5 328 aa6.81□□□□□ -1.32
CSDE1-218ENST00000610726 LAS2Q8IYD9 372 aa6.81□□□□□ -1.32
CSDE1-218ENST00000610726 ZNF101Q8IZC7 436 aa6.81□□□□□ -1.32
CSDE1-218ENST00000610726 NRSN2Q9GZP1 204 aa6.81□□□□□ -1.32
CSDE1-218ENST00000610726 RPRD1BQ9NQG5 326 aaKnown RBP6.81□□□□□ -1.32
CSDE1-218ENST00000610726 DAPP1Q9UN19 280 aa6.81□□□□□ -1.32
CSDE1-218ENST00000610726 ZNF443Q9Y2A4 671 aaPredicted RBP6.81□□□□□ -1.32
CSDE1-218ENST00000610726 MYOFQ9NZM1 2061 aa6.81□□□□□ -1.32
CSDE1-218ENST00000610726 CD8B2A6NJW9 211 aa6.81□□□□□ -1.32
CSDE1-218ENST00000610726 EFCAB7A8K855 629 aa6.81□□□□□ -1.32
CSDE1-218ENST00000610726 C12orf71A8MTZ7 269 aa6.81□□□□□ -1.32
CSDE1-218ENST00000610726 NPIPA2E9PIF3 369 aa6.81□□□□□ -1.32
CSDE1-218ENST00000610726 NPIPA3F8WFD2 350 aa6.81□□□□□ -1.32
CSDE1-218ENST00000610726 KIAA0513O60268 411 aa6.81□□□□□ -1.32
CSDE1-218ENST00000610726 CD8BP10966 210 aa6.81□□□□□ -1.32
CSDE1-218ENST00000610726 SLC2A2P11168 524 aaPredicted RBP6.81□□□□□ -1.32
CSDE1-218ENST00000610726 COL9A1P20849 921 aa6.81□□□□□ -1.32
CSDE1-218ENST00000610726 RBMS1P29558 406 aaKnown RBP6.81□□□□□ -1.32
CSDE1-218ENST00000610726 GGT2P36268 569 aa6.81□□□□□ -1.32
CSDE1-218ENST00000610726 GIPRP48546 466 aa6.81□□□□□ -1.32
CSDE1-218ENST00000610726 PER3P56645 1201 aa6.81□□□□□ -1.32
CSDE1-218ENST00000610726 CLRN1P58418 232 aa6.81□□□□□ -1.32
CSDE1-218ENST00000610726 TSPAN5P62079 268 aa6.81□□□□□ -1.32
CSDE1-218ENST00000610726 PLEKHG7Q6ZR37 379 aa6.81□□□□□ -1.32
CSDE1-218ENST00000610726 ZNF627Q7L945 461 aa6.81□□□□□ -1.32
CSDE1-218ENST00000610726 MAMDC2Q7Z304 686 aaPredicted RBP6.81□□□□□ -1.32
CSDE1-218ENST00000610726 RABEPKQ7Z6M1 372 aa6.81□□□□□ -1.32
CSDE1-218ENST00000610726 NLRP8Q86W28 1048 aa6.81□□□□□ -1.32
CSDE1-218ENST00000610726 DNAJA4Q8WW22 397 aaPredicted RBP6.81□□□□□ -1.32
CSDE1-218ENST00000610726 OMA1Q96E52 524 aa6.81□□□□□ -1.32
CSDE1-218ENST00000610726 LINC00615Q96LM1 132 aaPredicted RBP6.81□□□□□ -1.32
CSDE1-218ENST00000610726 C19orf43Q9BQ61 176 aa6.81□□□□□ -1.32
CSDE1-218ENST00000610726 MROQ9BYG7 248 aa6.81□□□□□ -1.32
CSDE1-218ENST00000610726 SAP130Q9H0E3 1048 aa6.81□□□□□ -1.32
CSDE1-218ENST00000610726 SLC39A1Q9NY26 324 aa6.81□□□□□ -1.32
CSDE1-218ENST00000610726 ASIC5Q9NY37 505 aa6.81□□□□□ -1.32
CSDE1-218ENST00000610726 SNX11Q9Y5W9 270 aa6.81□□□□□ -1.32
CSDE1-218ENST00000610726 TRBV2A0A0J9YWF9 115 aa6.8□□□□□ -1.32
CSDE1-218ENST00000610726 A0A1B0GW55 424 aa6.8□□□□□ -1.32
CSDE1-218ENST00000610726 A6NL46 340 aa6.8□□□□□ -1.32
CSDE1-218ENST00000610726 C5orf67F2Z3F1 127 aa6.8□□□□□ -1.32
CSDE1-218ENST00000610726 H0YC42 278 aa6.8□□□□□ -1.32
CSDE1-218ENST00000610726 GASTP01350 101 aa6.8□□□□□ -1.32
CSDE1-218ENST00000610726 DUX4L2P0CJ85 424 aa6.8□□□□□ -1.32
CSDE1-218ENST00000610726 DUX4L3P0CJ86 424 aa6.8□□□□□ -1.32
CSDE1-218ENST00000610726 DUX4L4P0CJ87 422 aa6.8□□□□□ -1.32
CSDE1-218ENST00000610726 DUX4L5P0CJ88 424 aa6.8□□□□□ -1.32
CSDE1-218ENST00000610726 DUX4L6P0CJ89 424 aa6.8□□□□□ -1.32
CSDE1-218ENST00000610726 DUX4L7P0CJ90 424 aa6.8□□□□□ -1.32
CSDE1-218ENST00000610726 PSKH1P11801 424 aa6.8□□□□□ -1.32
CSDE1-218ENST00000610726 CA5AP35218 305 aa6.8□□□□□ -1.32
CSDE1-218ENST00000610726 SLC15A1P46059 708 aa6.8□□□□□ -1.32
CSDE1-218ENST00000610726 STT3AP46977 705 aa6.8□□□□□ -1.32
CSDE1-218ENST00000610726 DAPP51397 102 aa6.8□□□□□ -1.32
CSDE1-218ENST00000610726 LIM2P55344 173 aa6.8□□□□□ -1.32
CSDE1-218ENST00000610726 GALK2Q01415 458 aa6.8□□□□□ -1.32
CSDE1-218ENST00000610726 TFF2Q03403 129 aa6.8□□□□□ -1.32
CSDE1-218ENST00000610726 EEF1A2Q05639 463 aaKnown RBP6.8□□□□□ -1.32
CSDE1-218ENST00000610726 RASGEF1BQ0VAM2 473 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms