RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 CRISP3P54108 245 aa13□□□□□ -0.33
CTSA-219ENST00000607841 GANABQ14697 944 aaKnown RBP13□□□□□ -0.33
CTSA-219ENST00000607841 ZNF141Q15928 474 aa13□□□□□ -0.33
CTSA-219ENST00000607841 SYPL1Q16563 259 aa13□□□□□ -0.33
CTSA-219ENST00000607841 ZNF630Q2M218 657 aaPredicted RBP13□□□□□ -0.33
CTSA-219ENST00000607841 TRMT5Q32P41 509 aaKnown RBP13□□□□□ -0.33
CTSA-219ENST00000607841 KLHL26Q53HC5 615 aa13□□□□□ -0.33
CTSA-219ENST00000607841 REP15Q6BDI9 236 aa13□□□□□ -0.33
CTSA-219ENST00000607841 OR5M10Q6IEU7 315 aa13□□□□□ -0.33
CTSA-219ENST00000607841 TYW3Q6IPR3 259 aaKnown RBP13□□□□□ -0.33
CTSA-219ENST00000607841 APOOLQ6UXV4 268 aa13□□□□□ -0.33
CTSA-219ENST00000607841 ZNF619Q8N2I2 560 aa13□□□□□ -0.33
CTSA-219ENST00000607841 METTL25Q8N6Q8 603 aa13□□□□□ -0.33
CTSA-219ENST00000607841 ANKS4BQ8N8V4 417 aa13□□□□□ -0.33
CTSA-219ENST00000607841 LRRC37BQ96QE4 947 aa13□□□□□ -0.33
CTSA-219ENST00000607841 THUMPD3Q9BV44 507 aaKnown RBP13□□□□□ -0.33
CTSA-219ENST00000607841 MYLK2Q9H1R3 596 aa13□□□□□ -0.33
CTSA-219ENST00000607841 MTHFD2LQ9H903 347 aaPredicted RBP13□□□□□ -0.33
CTSA-219ENST00000607841 PLSCR2Q9NRY7 297 aa13□□□□□ -0.33
CTSA-219ENST00000607841 CFAP46Q8IYW2 2715 aa12.99□□□□□ -0.33
CTSA-219ENST00000607841 IGLV3-32A0A0A0MS00 114 aa12.99□□□□□ -0.33
CTSA-219ENST00000607841 TRGV5A0A0B4J1U4 118 aa12.99□□□□□ -0.33
CTSA-219ENST00000607841 A0A1B0GTH9 108 aa12.99□□□□□ -0.33
CTSA-219ENST00000607841 A0A1B0GVC2 190 aa12.99□□□□□ -0.33
CTSA-219ENST00000607841 OR14I1A6ND48 311 aa12.99□□□□□ -0.33
CTSA-219ENST00000607841 C5orf58C9J3I9 102 aa12.99□□□□□ -0.33
CTSA-219ENST00000607841 NPIPB9F8W1W9 429 aa12.99□□□□□ -0.33
CTSA-219ENST00000607841 GTPBP1O00178 669 aaKnown RBP12.99□□□□□ -0.33
CTSA-219ENST00000607841 UGT2B17O75795 530 aa12.99□□□□□ -0.33
CTSA-219ENST00000607841 WISP1O95388 367 aa12.99□□□□□ -0.33
CTSA-219ENST00000607841 TFPTP0C1Z6 253 aa12.99□□□□□ -0.33
CTSA-219ENST00000607841 COX4I1P13073 169 aa12.99□□□□□ -0.33
CTSA-219ENST00000607841 SRD5A2P31213 254 aa12.99□□□□□ -0.33
CTSA-219ENST00000607841 PTGS2P35354 604 aa12.99□□□□□ -0.33
CTSA-219ENST00000607841 CASP6P55212 293 aa12.99□□□□□ -0.33
CTSA-219ENST00000607841 DSCR4P56555 118 aaPredicted RBP12.99□□□□□ -0.33
CTSA-219ENST00000607841 CHRNEQ04844 493 aa12.99□□□□□ -0.33
CTSA-219ENST00000607841 FUT5Q11128 374 aa12.99□□□□□ -0.33
CTSA-219ENST00000607841 MRPL49Q13405 166 aaKnown RBP12.99□□□□□ -0.33
CTSA-219ENST00000607841 GCNT6Q5T4J0 391 aa12.99□□□□□ -0.33
CTSA-219ENST00000607841 FRRS1Q6ZNA5 592 aa12.99□□□□□ -0.33
CTSA-219ENST00000607841 TRILQ7L0X0 811 aa12.99□□□□□ -0.33
CTSA-219ENST00000607841 ZNF614Q8N883 585 aa12.99□□□□□ -0.33
CTSA-219ENST00000607841 ANKFN1Q8N957 763 aa12.99□□□□□ -0.33
CTSA-219ENST00000607841 FADS6Q8N9I5 356 aa12.99□□□□□ -0.33
CTSA-219ENST00000607841 OR2M3Q8NG83 312 aa12.99□□□□□ -0.33
CTSA-219ENST00000607841 PHOSPHO1Q8TCT1 267 aa12.99□□□□□ -0.33
CTSA-219ENST00000607841 SLC38A5Q8WUX1 472 aa12.99□□□□□ -0.33
CTSA-219ENST00000607841 LRRC58Q96CX6 371 aa12.99□□□□□ -0.33
CTSA-219ENST00000607841 CPPED1Q9BRF8 314 aaPredicted RBP12.99□□□□□ -0.33
CTSA-219ENST00000607841 RTN4RQ9BZR6 473 aa12.99□□□□□ -0.33
CTSA-219ENST00000607841 DSN1Q9H410 356 aa12.99□□□□□ -0.33
CTSA-219ENST00000607841 EFCAB1Q9HAE3 211 aa12.99□□□□□ -0.33
CTSA-219ENST00000607841 CACYBPQ9HB71 228 aaKnown RBP12.99□□□□□ -0.33
CTSA-219ENST00000607841 A4GALTQ9NPC4 353 aa12.99□□□□□ -0.33
CTSA-219ENST00000607841 MED11Q9P086 117 aa12.99□□□□□ -0.33
CTSA-219ENST00000607841 SUCOQ9UBS9 1254 aaKnown RBP12.99□□□□□ -0.33
CTSA-219ENST00000607841 DKKL1Q9UK85 242 aa12.99□□□□□ -0.33
CTSA-219ENST00000607841 MRPS18CQ9Y3D5 142 aaKnown RBP12.99□□□□□ -0.33
CTSA-219ENST00000607841 NPIPA5A0A0B4J1W7 369 aa12.98□□□□□ -0.33
CTSA-219ENST00000607841 A0A0G2JPF8 293 aa12.98□□□□□ -0.33
CTSA-219ENST00000607841 PRAMEF27A3QJZ7 478 aa12.98□□□□□ -0.33
CTSA-219ENST00000607841 SERINC4A6NH21 518 aa12.98□□□□□ -0.33
CTSA-219ENST00000607841 HNRNPCL2B2RXH8 293 aa12.98□□□□□ -0.33
CTSA-219ENST00000607841 HNRNPCL3B7ZW38 293 aa12.98□□□□□ -0.33
CTSA-219ENST00000607841 FAM47E-STBD1D6RA91 191 aa12.98□□□□□ -0.33
CTSA-219ENST00000607841 NPIPA7E9PJI5 369 aa12.98□□□□□ -0.33
CTSA-219ENST00000607841 AQP7O14520 342 aa12.98□□□□□ -0.33
CTSA-219ENST00000607841 ADAM10O14672 748 aa12.98□□□□□ -0.33
CTSA-219ENST00000607841 HNRNPCL1O60812 293 aaKnown RBP12.98□□□□□ -0.33
CTSA-219ENST00000607841 TNFRSF21O75509 655 aa12.98□□□□□ -0.33
CTSA-219ENST00000607841 WISP2O76076 250 aa12.98□□□□□ -0.33
CTSA-219ENST00000607841 BCHEP06276 602 aa12.98□□□□□ -0.33
CTSA-219ENST00000607841 CHRM4P08173 479 aa12.98□□□□□ -0.33
CTSA-219ENST00000607841 CELA3AP09093 270 aa12.98□□□□□ -0.33
CTSA-219ENST00000607841 NPIPA8P0DM63 369 aa12.98□□□□□ -0.33
CTSA-219ENST00000607841 HNRNPCL4P0DMR1 293 aa12.98□□□□□ -0.33
CTSA-219ENST00000607841 ABOP16442 354 aa12.98□□□□□ -0.33
CTSA-219ENST00000607841 DPP4P27487 766 aa12.98□□□□□ -0.33
CTSA-219ENST00000607841 PRDX6P30041 224 aa12.98□□□□□ -0.33
CTSA-219ENST00000607841 ADH7P40394 386 aa12.98□□□□□ -0.33
CTSA-219ENST00000607841 PDZK1Q5T2W1 519 aa12.98□□□□□ -0.33
CTSA-219ENST00000607841 PRAMEF8Q5VWM4 474 aa12.98□□□□□ -0.33
CTSA-219ENST00000607841 PRAMEF7Q5VXH5 474 aa12.98□□□□□ -0.33
CTSA-219ENST00000607841 EIF3MQ7L2H7 374 aaKnown RBP12.98□□□□□ -0.33
CTSA-219ENST00000607841 SPPL2CQ8IUH8 684 aa12.98□□□□□ -0.33
CTSA-219ENST00000607841 POU5F2Q8N7G0 328 aa12.98□□□□□ -0.33
CTSA-219ENST00000607841 GATSQ8NAP1 163 aa12.98□□□□□ -0.33
CTSA-219ENST00000607841 CCDC197Q8NCU1 140 aa12.98□□□□□ -0.33
CTSA-219ENST00000607841 OR8J3Q8NGG0 315 aa12.98□□□□□ -0.33
CTSA-219ENST00000607841 OR14L1PQ8NHC6 308 aa12.98□□□□□ -0.33
CTSA-219ENST00000607841 B4GALNT2Q8NHY0 566 aa12.98□□□□□ -0.33
CTSA-219ENST00000607841 NEIL3Q8TAT5 605 aa12.98□□□□□ -0.33
CTSA-219ENST00000607841 PRR7Q8TB68 274 aa12.98□□□□□ -0.33
CTSA-219ENST00000607841 SARAFQ96BY9 339 aa12.98□□□□□ -0.33
CTSA-219ENST00000607841 OR2B2Q9GZK3 357 aa12.98□□□□□ -0.33
CTSA-219ENST00000607841 SLC38A1Q9H2H9 487 aa12.98□□□□□ -0.33
CTSA-219ENST00000607841 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.98□□□□□ -0.33
CTSA-219ENST00000607841 TAS2R10Q9NYW0 307 aa12.98□□□□□ -0.33
CTSA-219ENST00000607841 FBXL2Q9UKC9 423 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms