RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 TNFSF15O95150 251 aa16.05■□□□□ 0.16
PPFIA3-207ENST00000602716 SLC34A2O95436 690 aa16.05■□□□□ 0.16
PPFIA3-207ENST00000602716 EPPINO95925 133 aa16.05■□□□□ 0.16
PPFIA3-207ENST00000602716 OR1E2P47887 323 aa16.05■□□□□ 0.16
PPFIA3-207ENST00000602716 ANXA11P50995 505 aaKnown RBP16.05■□□□□ 0.16
PPFIA3-207ENST00000602716 EIF3IQ13347 325 aaKnown RBP16.05■□□□□ 0.16
PPFIA3-207ENST00000602716 OR2T5Q6IEZ7 315 aa16.05■□□□□ 0.16
PPFIA3-207ENST00000602716 TYW3Q6IPR3 259 aaKnown RBP16.05■□□□□ 0.16
PPFIA3-207ENST00000602716 C16orf87Q6PH81 154 aa16.05■□□□□ 0.16
PPFIA3-207ENST00000602716 C6orf15Q6UXA7 325 aaPredicted RBP16.05■□□□□ 0.16
PPFIA3-207ENST00000602716 ZBTB46Q86UZ6 589 aa16.05■□□□□ 0.16
PPFIA3-207ENST00000602716 ANKRD13BQ86YJ7 626 aa16.05■□□□□ 0.16
PPFIA3-207ENST00000602716 OR2T29Q8NH02 315 aa16.05■□□□□ 0.16
PPFIA3-207ENST00000602716 OR14A16Q8NHC5 309 aa16.05■□□□□ 0.16
PPFIA3-207ENST00000602716 CNIH3Q8TBE1 160 aa16.05■□□□□ 0.16
PPFIA3-207ENST00000602716 CT55Q8WUE5 264 aa16.05■□□□□ 0.16
PPFIA3-207ENST00000602716 COX4I2Q96KJ9 171 aa16.05■□□□□ 0.16
PPFIA3-207ENST00000602716 TRNT1Q96Q11 434 aaKnown RBP16.05■□□□□ 0.16
PPFIA3-207ENST00000602716 STACQ99469 402 aa16.05■□□□□ 0.16
PPFIA3-207ENST00000602716 NRSN2Q9GZP1 204 aa16.05■□□□□ 0.16
PPFIA3-207ENST00000602716 WDR54Q9H977 334 aa16.05■□□□□ 0.16
PPFIA3-207ENST00000602716 BCL2L10Q9HD36 194 aa16.05■□□□□ 0.16
PPFIA3-207ENST00000602716 IL1RAPQ9NPH3 570 aa16.05■□□□□ 0.16
PPFIA3-207ENST00000602716 GPN3Q9UHW5 284 aaPredicted RBP16.05■□□□□ 0.16
PPFIA3-207ENST00000602716 RPS6KA6Q9UK32 745 aa16.05■□□□□ 0.16
PPFIA3-207ENST00000602716 CORINQ9Y5Q5 1042 aa16.05■□□□□ 0.16
PPFIA3-207ENST00000602716 FAM186AA6NE01 2351 aa16.05■□□□□ 0.16
PPFIA3-207ENST00000602716 SDK2Q58EX2 2172 aa16.04■□□□□ 0.16
PPFIA3-207ENST00000602716 CCDC88CQ9P219 2028 aa16.04■□□□□ 0.16
PPFIA3-207ENST00000602716 C9J4A7 227 aa16.04■□□□□ 0.16
PPFIA3-207ENST00000602716 UGT2B11O75310 529 aa16.04■□□□□ 0.16
PPFIA3-207ENST00000602716 HNRNPCP07910 306 aaKnown RBP eCLIP16.04■□□□□ 0.16
PPFIA3-207ENST00000602716 RFX3P48380 749 aa16.04■□□□□ 0.16
PPFIA3-207ENST00000602716 ARHGAP11BQ3KRB8 267 aa16.04■□□□□ 0.16
PPFIA3-207ENST00000602716 IQCCQ4KMZ1 466 aa16.04■□□□□ 0.16
PPFIA3-207ENST00000602716 ATAD3BQ5T9A4 648 aa16.04■□□□□ 0.16
PPFIA3-207ENST00000602716 DCDC5Q6ZRR9 648 aa16.04■□□□□ 0.16
PPFIA3-207ENST00000602716 SLC30A8Q8IWU4 369 aa16.04■□□□□ 0.16
PPFIA3-207ENST00000602716 BBS10Q8TAM1 723 aa16.04■□□□□ 0.16
PPFIA3-207ENST00000602716 SDF2Q99470 211 aa16.04■□□□□ 0.16
PPFIA3-207ENST00000602716 ZNF350Q9GZX5 532 aa16.04■□□□□ 0.16
PPFIA3-207ENST00000602716 ADPRHL2Q9NX46 363 aa16.04■□□□□ 0.16
PPFIA3-207ENST00000602716 CEP250Q9BV73 2442 aa16.04■□□□□ 0.16
PPFIA3-207ENST00000602716 TMEM247A6NEH6 219 aa16.04■□□□□ 0.16
PPFIA3-207ENST00000602716 DUXAA6NLW8 204 aa16.04■□□□□ 0.16
PPFIA3-207ENST00000602716 ZNF99A8MXY4 864 aaPredicted RBP16.04■□□□□ 0.16
PPFIA3-207ENST00000602716 J3QRK9 145 aa16.04■□□□□ 0.16
PPFIA3-207ENST00000602716 FUT4P22083 530 aa16.04■□□□□ 0.16
PPFIA3-207ENST00000602716 DAPP51397 102 aa16.04■□□□□ 0.16
PPFIA3-207ENST00000602716 GPR143P51810 404 aa16.04■□□□□ 0.16
PPFIA3-207ENST00000602716 SELENOWP63302 87 aa16.04■□□□□ 0.16
PPFIA3-207ENST00000602716 IL5RAQ01344 420 aa16.04■□□□□ 0.16
PPFIA3-207ENST00000602716 BIKQ13323 160 aa16.04■□□□□ 0.16
PPFIA3-207ENST00000602716 CTF1Q16619 201 aa16.04■□□□□ 0.16
PPFIA3-207ENST00000602716 KDM4DQ6B0I6 523 aa16.04■□□□□ 0.16
PPFIA3-207ENST00000602716 ZCCHC12Q6PEW1 402 aa16.04■□□□□ 0.16
PPFIA3-207ENST00000602716 PAPD4Q6PIY7 484 aaKnown RBP16.04■□□□□ 0.16
PPFIA3-207ENST00000602716 TMEM205Q6UW68 189 aa16.04■□□□□ 0.16
PPFIA3-207ENST00000602716 GALNT5Q7Z7M9 940 aa16.04■□□□□ 0.16
PPFIA3-207ENST00000602716 VRK2Q86Y07 508 aa16.04■□□□□ 0.16
PPFIA3-207ENST00000602716 SETD9Q8NE22 299 aa16.04■□□□□ 0.16
PPFIA3-207ENST00000602716 NFAM1Q8NET5 270 aaPredicted RBP16.04■□□□□ 0.16
PPFIA3-207ENST00000602716 OR4D11Q8NGI4 311 aa16.04■□□□□ 0.16
PPFIA3-207ENST00000602716 FAR1Q8WVX9 515 aa16.04■□□□□ 0.16
PPFIA3-207ENST00000602716 APOBEC4Q8WW27 367 aaKnown RBP16.04■□□□□ 0.16
PPFIA3-207ENST00000602716 C7orf34Q96L11 122 aa16.04■□□□□ 0.16
PPFIA3-207ENST00000602716 ZNF578Q96N58 590 aaPredicted RBP16.04■□□□□ 0.16
PPFIA3-207ENST00000602716 ZPBPQ9BS86 351 aa16.04■□□□□ 0.16
PPFIA3-207ENST00000602716 DOHHQ9BU89 302 aa16.04■□□□□ 0.16
PPFIA3-207ENST00000602716 KCNE5Q9UJ90 142 aa16.04■□□□□ 0.16
PPFIA3-207ENST00000602716 SAGE2PA6NJ88 616 aa16.03■□□□□ 0.16
PPFIA3-207ENST00000602716 CLDN24A6NM45 220 aa16.03■□□□□ 0.16
PPFIA3-207ENST00000602716 XPNPEP2O43895 674 aa16.03■□□□□ 0.16
PPFIA3-207ENST00000602716 KCNK2O95069 426 aa16.03■□□□□ 0.16
PPFIA3-207ENST00000602716 ANGPTL1O95841 491 aa16.03■□□□□ 0.16
PPFIA3-207ENST00000602716 CLK3P49761 638 aaKnown RBP16.03■□□□□ 0.16
PPFIA3-207ENST00000602716 POU6F2P78424 691 aaPredicted RBP16.03■□□□□ 0.16
PPFIA3-207ENST00000602716 EMX1Q04741 257 aaPredicted RBP16.03■□□□□ 0.16
PPFIA3-207ENST00000602716 KEAP1Q14145 624 aa16.03■□□□□ 0.16
PPFIA3-207ENST00000602716 EBPQ15125 230 aaKnown RBP16.03■□□□□ 0.16
PPFIA3-207ENST00000602716 ARMC8Q8IUR7 673 aa16.03■□□□□ 0.16
PPFIA3-207ENST00000602716 LACC1Q8IV20 430 aa16.03■□□□□ 0.16
PPFIA3-207ENST00000602716 APCDD1LQ8NCL9 501 aa16.03■□□□□ 0.16
PPFIA3-207ENST00000602716 OR7G1Q8NGA0 311 aa16.03■□□□□ 0.16
PPFIA3-207ENST00000602716 DAZLQ92904 295 aaKnown RBP16.03■□□□□ 0.16
PPFIA3-207ENST00000602716 GAL3ST4Q96RP7 486 aa16.03■□□□□ 0.16
PPFIA3-207ENST00000602716 NXF5Q9H1B4 397 aaKnown RBP16.03■□□□□ 0.16
PPFIA3-207ENST00000602716 RIBC2Q9H4K1 309 aa16.03■□□□□ 0.16
PPFIA3-207ENST00000602716 DLL3Q9NYJ7 618 aa16.03■□□□□ 0.16
PPFIA3-207ENST00000602716 LIPT1Q9Y234 373 aa16.03■□□□□ 0.16
PPFIA3-207ENST00000602716 B3GNT3Q9Y2A9 372 aa16.03■□□□□ 0.16
PPFIA3-207ENST00000602716 CHST2Q9Y4C5 530 aa16.03■□□□□ 0.16
PPFIA3-207ENST00000602716 HSPE1-MOB4S4R3N1 261 aa16.03■□□□□ 0.16
PPFIA3-207ENST00000602716 CDC14CA4D256 554 aa16.02■□□□□ 0.16
PPFIA3-207ENST00000602716 MASP2O00187 686 aa16.02■□□□□ 0.16
PPFIA3-207ENST00000602716 PEX12O00623 359 aa16.02■□□□□ 0.16
PPFIA3-207ENST00000602716 CEACAM1P13688 526 aa16.02■□□□□ 0.16
PPFIA3-207ENST00000602716 PUM1Q14671 1186 aaKnown RBP eCLIP16.02■□□□□ 0.16
PPFIA3-207ENST00000602716 LAPTM4AQ15012 233 aa16.02■□□□□ 0.16
PPFIA3-207ENST00000602716 MAPK14Q16539 360 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms