RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 CDS1Q92903 461 aa12.83□□□□□ -0.36
LIG1-218ENST00000599322 ARL8AQ96BM9 186 aa12.83□□□□□ -0.36
LIG1-218ENST00000599322 TESCQ96BS2 214 aa12.83□□□□□ -0.36
LIG1-218ENST00000599322 GIMAP5Q96F15 307 aa12.83□□□□□ -0.36
LIG1-218ENST00000599322 SLC35G5Q96KT7 338 aa12.83□□□□□ -0.36
LIG1-218ENST00000599322 CXorf36Q9H7Y0 433 aa12.83□□□□□ -0.36
LIG1-218ENST00000599322 SIRT3Q9NTG7 399 aaPredicted RBP12.83□□□□□ -0.36
LIG1-218ENST00000599322 MARCOQ9UEW3 520 aaPredicted RBP12.83□□□□□ -0.36
LIG1-218ENST00000599322 FOXD3Q9UJU5 478 aaPredicted RBP12.83□□□□□ -0.36
LIG1-218ENST00000599322 EXPH5Q8NEV8 1989 aa12.82□□□□□ -0.36
LIG1-218ENST00000599322 E9PBE3 544 aa12.82□□□□□ -0.36
LIG1-218ENST00000599322 TOXO94900 526 aa12.82□□□□□ -0.36
LIG1-218ENST00000599322 BMP5P22003 454 aa12.82□□□□□ -0.36
LIG1-218ENST00000599322 UQCRC2P22695 453 aa12.82□□□□□ -0.36
LIG1-218ENST00000599322 ME2P23368 584 aa12.82□□□□□ -0.36
LIG1-218ENST00000599322 CTSSP25774 331 aa12.82□□□□□ -0.36
LIG1-218ENST00000599322 CHI3L1P36222 383 aaPredicted RBP12.82□□□□□ -0.36
LIG1-218ENST00000599322 ADH7P40394 386 aa12.82□□□□□ -0.36
LIG1-218ENST00000599322 STARP49675 285 aa12.82□□□□□ -0.36
LIG1-218ENST00000599322 GFRA1P56159 465 aa12.82□□□□□ -0.36
LIG1-218ENST00000599322 HBA1P69905 142 aa12.82□□□□□ -0.36
LIG1-218ENST00000599322 MYBPHQ13203 477 aa12.82□□□□□ -0.36
LIG1-218ENST00000599322 CDSNQ15517 529 aa12.82□□□□□ -0.36
LIG1-218ENST00000599322 SGCBQ16585 318 aa12.82□□□□□ -0.36
LIG1-218ENST00000599322 FLYWCH1Q4VC44 716 aa12.82□□□□□ -0.36
LIG1-218ENST00000599322 DCST2Q5T1A1 773 aa12.82□□□□□ -0.36
LIG1-218ENST00000599322 OR2A2Q6IF42 318 aa12.82□□□□□ -0.36
LIG1-218ENST00000599322 C16orf62Q7Z3J2 963 aa12.82□□□□□ -0.36
LIG1-218ENST00000599322 MTERF4Q7Z6M4 381 aaKnown RBP12.82□□□□□ -0.36
LIG1-218ENST00000599322 GALNT10Q86SR1 603 aa12.82□□□□□ -0.36
LIG1-218ENST00000599322 WDR75Q8IWA0 830 aaKnown RBP12.82□□□□□ -0.36
LIG1-218ENST00000599322 UBQLNLQ8IYU4 475 aa12.82□□□□□ -0.36
LIG1-218ENST00000599322 GLB1L3Q8NCI6 653 aaPredicted RBP12.82□□□□□ -0.36
LIG1-218ENST00000599322 OR4C3Q8NH37 302 aa12.82□□□□□ -0.36
LIG1-218ENST00000599322 OR5AK3PQ8NH89 298 aa12.82□□□□□ -0.36
LIG1-218ENST00000599322 PIWIL2Q8TC59 973 aaKnown RBP12.82□□□□□ -0.36
LIG1-218ENST00000599322 PHOSPHO1Q8TCT1 267 aa12.82□□□□□ -0.36
LIG1-218ENST00000599322 WNT2BQ93097 391 aa12.82□□□□□ -0.36
LIG1-218ENST00000599322 C1GALT1C1Q96EU7 318 aa12.82□□□□□ -0.36
LIG1-218ENST00000599322 OTUB1Q96FW1 271 aaPredicted RBP12.82□□□□□ -0.36
LIG1-218ENST00000599322 ENKD1Q9H0I2 346 aa12.82□□□□□ -0.36
LIG1-218ENST00000599322 PHF3Q92576 2039 aaKnown RBP12.81□□□□□ -0.36
LIG1-218ENST00000599322 GOLGA8QA0A0J9YX86 632 aa12.81□□□□□ -0.36
LIG1-218ENST00000599322 A0A1W2PQD3 144 aa12.81□□□□□ -0.36
LIG1-218ENST00000599322 GOLGA8OA6NCC3 632 aa12.81□□□□□ -0.36
LIG1-218ENST00000599322 MBD3L4A6NDZ8 208 aaPredicted RBP12.81□□□□□ -0.36
LIG1-218ENST00000599322 MBD3L3A6NE82 208 aaPredicted RBP12.81□□□□□ -0.36
LIG1-218ENST00000599322 MBD3L5A6NJ08 208 aaPredicted RBP12.81□□□□□ -0.36
LIG1-218ENST00000599322 GOLGA8NF8WBI6 632 aa12.81□□□□□ -0.36
LIG1-218ENST00000599322 H3BML4 177 aa12.81□□□□□ -0.36
LIG1-218ENST00000599322 C19orf84I3L1E1 186 aa12.81□□□□□ -0.36
LIG1-218ENST00000599322 KLF11O14901 512 aa12.81□□□□□ -0.36
LIG1-218ENST00000599322 GMFGO60234 142 aa12.81□□□□□ -0.36
LIG1-218ENST00000599322 ZIC3O60481 467 aa12.81□□□□□ -0.36
LIG1-218ENST00000599322 SNNO75324 88 aaPredicted RBP12.81□□□□□ -0.36
LIG1-218ENST00000599322 NUDT14O95848 222 aa12.81□□□□□ -0.36
LIG1-218ENST00000599322 IGKV1D-16P01601 117 aa12.81□□□□□ -0.36
LIG1-218ENST00000599322 TMIGD3P0DMS9 266 aaPredicted RBP12.81□□□□□ -0.36
LIG1-218ENST00000599322 IDO1P14902 403 aa12.81□□□□□ -0.36
LIG1-218ENST00000599322 UQCRC1P31930 480 aa12.81□□□□□ -0.36
LIG1-218ENST00000599322 CEACAM8P31997 349 aaPredicted RBP12.81□□□□□ -0.36
LIG1-218ENST00000599322 ASCL1P50553 236 aa12.81□□□□□ -0.36
LIG1-218ENST00000599322 HPCAP84074 193 aa12.81□□□□□ -0.36
LIG1-218ENST00000599322 PDSS1Q5T2R2 415 aa12.81□□□□□ -0.36
LIG1-218ENST00000599322 CCNJQ5T5M9 372 aa12.81□□□□□ -0.36
LIG1-218ENST00000599322 KIF18BQ86Y91 864 aa12.81□□□□□ -0.36
LIG1-218ENST00000599322 ZNF614Q8N883 585 aa12.81□□□□□ -0.36
LIG1-218ENST00000599322 TNIP2Q8NFZ5 429 aa12.81□□□□□ -0.36
LIG1-218ENST00000599322 B4GALNT2Q8NHY0 566 aa12.81□□□□□ -0.36
LIG1-218ENST00000599322 MBD3L2Q8NHZ7 208 aaPredicted RBP12.81□□□□□ -0.36
LIG1-218ENST00000599322 ACTRT2Q8TDY3 377 aa12.81□□□□□ -0.36
LIG1-218ENST00000599322 ZNF75CPQ92670 426 aaPredicted RBP12.81□□□□□ -0.36
LIG1-218ENST00000599322 ATP6V1G3Q96LB4 118 aa12.81□□□□□ -0.36
LIG1-218ENST00000599322 OR7D2Q96RA2 312 aa12.81□□□□□ -0.36
LIG1-218ENST00000599322 TUBA1CQ9BQE3 449 aa12.81□□□□□ -0.36
LIG1-218ENST00000599322 ZNF559Q9BR84 538 aa12.81□□□□□ -0.36
LIG1-218ENST00000599322 PRRG4Q9BZD6 226 aa12.81□□□□□ -0.36
LIG1-218ENST00000599322 FLRT3Q9NZU0 649 aa12.81□□□□□ -0.36
LIG1-218ENST00000599322 AP4B1Q9Y6B7 739 aa12.81□□□□□ -0.36
LIG1-218ENST00000599322 AKAP9Q99996 3911 aa12.8□□□□□ -0.36
LIG1-218ENST00000599322 IGLV3-32A0A0A0MS00 114 aa12.8□□□□□ -0.36
LIG1-218ENST00000599322 OR2M5A3KFT3 312 aa12.8□□□□□ -0.36
LIG1-218ENST00000599322 CLCA1A8K7I4 914 aa12.8□□□□□ -0.36
LIG1-218ENST00000599322 HMGB1P1B2RPK0 211 aaPredicted RBP12.8□□□□□ -0.36
LIG1-218ENST00000599322 SDHDO14521 159 aa12.8□□□□□ -0.36
LIG1-218ENST00000599322 HCRTR2O43614 444 aa12.8□□□□□ -0.36
LIG1-218ENST00000599322 STX11O75558 287 aa12.8□□□□□ -0.36
LIG1-218ENST00000599322 IL18BPO95998 194 aa12.8□□□□□ -0.36
LIG1-218ENST00000599322 ZNF708P17019 499 aa12.8□□□□□ -0.36
LIG1-218ENST00000599322 EPHA3P29320 983 aa12.8□□□□□ -0.36
LIG1-218ENST00000599322 LHX2P50458 406 aa12.8□□□□□ -0.36
LIG1-218ENST00000599322 ATP12AP54707 1039 aa12.8□□□□□ -0.36
LIG1-218ENST00000599322 NME5P56597 212 aa12.8□□□□□ -0.36
LIG1-218ENST00000599322 TXNL4AP83876 142 aaKnown RBP12.8□□□□□ -0.36
LIG1-218ENST00000599322 OCRLQ01968 901 aa12.8□□□□□ -0.36
LIG1-218ENST00000599322 GSTA3Q16772 222 aa12.8□□□□□ -0.36
LIG1-218ENST00000599322 FAM174BQ3ZCQ3 159 aa12.8□□□□□ -0.36
LIG1-218ENST00000599322 DCST1Q5T197 706 aa12.8□□□□□ -0.36
LIG1-218ENST00000599322 CLECL1Q8IZS7 167 aa12.8□□□□□ -0.36
LIG1-218ENST00000599322 GATSQ8NAP1 163 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms