RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 HHATLQ9HCP6 504 aa15.18■□□□□ 0.02
SSBP4-204ENST00000597724 CAMK2AQ9UQM7 478 aa15.18■□□□□ 0.02
SSBP4-204ENST00000597724 RNF6Q9Y252 685 aa15.18■□□□□ 0.02
SSBP4-204ENST00000597724 A0A1W2PQD3 144 aa15.17■□□□□ 0.02
SSBP4-204ENST00000597724 CCDC154A6NI56 674 aa15.17■□□□□ 0.02
SSBP4-204ENST00000597724 EPPINO95925 133 aa15.17■□□□□ 0.02
SSBP4-204ENST00000597724 CPN1P15169 458 aa15.17■□□□□ 0.02
SSBP4-204ENST00000597724 HPGDP15428 266 aa15.17■□□□□ 0.02
SSBP4-204ENST00000597724 CHMP24386 653 aa15.17■□□□□ 0.02
SSBP4-204ENST00000597724 CDKN2CP42773 168 aa15.17■□□□□ 0.02
SSBP4-204ENST00000597724 MRPL19P49406 292 aaKnown RBP15.17■□□□□ 0.02
SSBP4-204ENST00000597724 B3GALT5-AS1P59052 145 aa15.17■□□□□ 0.02
SSBP4-204ENST00000597724 GANABQ14697 944 aaKnown RBP15.17■□□□□ 0.02
SSBP4-204ENST00000597724 MIER2Q8N344 545 aa15.17■□□□□ 0.02
SSBP4-204ENST00000597724 TRIML2Q8N7C3 387 aa15.17■□□□□ 0.02
SSBP4-204ENST00000597724 OR9I1Q8NGQ6 314 aa15.17■□□□□ 0.02
SSBP4-204ENST00000597724 ASB5Q8WWX0 329 aa15.17■□□□□ 0.02
SSBP4-204ENST00000597724 C1GALT1C1Q96EU7 318 aa15.17■□□□□ 0.02
SSBP4-204ENST00000597724 SLC35A5Q9BS91 424 aa15.17■□□□□ 0.02
SSBP4-204ENST00000597724 OR51I1Q9H343 314 aa15.17■□□□□ 0.02
SSBP4-204ENST00000597724 UQCRHLA0A096LP55 91 aa15.16■□□□□ 0.02
SSBP4-204ENST00000597724 PRSS44E7EML9 344 aa15.16■□□□□ 0.02
SSBP4-204ENST00000597724 NPIPB9F8W1W9 429 aa15.16■□□□□ 0.02
SSBP4-204ENST00000597724 SCDO00767 359 aa15.16■□□□□ 0.02
SSBP4-204ENST00000597724 EDF1O60869 148 aaKnown RBP15.16■□□□□ 0.02
SSBP4-204ENST00000597724 AGR2O95994 175 aa15.16■□□□□ 0.02
SSBP4-204ENST00000597724 AK1P00568 194 aa15.16■□□□□ 0.02
SSBP4-204ENST00000597724 C1QCP02747 245 aa15.16■□□□□ 0.02
SSBP4-204ENST00000597724 HK1P19367 917 aa15.16■□□□□ 0.02
SSBP4-204ENST00000597724 TCEA1P23193 301 aaKnown RBP15.16■□□□□ 0.02
SSBP4-204ENST00000597724 MSX1P28360 303 aa15.16■□□□□ 0.02
SSBP4-204ENST00000597724 HTR1EP28566 365 aa15.16■□□□□ 0.02
SSBP4-204ENST00000597724 CHRNB4P30926 498 aa15.16■□□□□ 0.02
SSBP4-204ENST00000597724 CHI3L1P36222 383 aaPredicted RBP15.16■□□□□ 0.02
SSBP4-204ENST00000597724 DCTP40126 519 aa15.16■□□□□ 0.02
SSBP4-204ENST00000597724 LHX2P50458 406 aa15.16■□□□□ 0.02
SSBP4-204ENST00000597724 POLR2JP52435 117 aaKnown RBP15.16■□□□□ 0.02
SSBP4-204ENST00000597724 ATP12AP54707 1039 aa15.16■□□□□ 0.02
SSBP4-204ENST00000597724 CASP9P55211 416 aa15.16■□□□□ 0.02
SSBP4-204ENST00000597724 SF3B4Q15427 424 aaKnown RBP eCLIP15.16■□□□□ 0.021e-6■■■■■ 37.1
SSBP4-204ENST00000597724 ZNF630Q2M218 657 aaPredicted RBP15.16■□□□□ 0.02
SSBP4-204ENST00000597724 ARHGAP11BQ3KRB8 267 aa15.16■□□□□ 0.02
SSBP4-204ENST00000597724 ACSF3Q4G176 576 aaPredicted RBP15.16■□□□□ 0.02
SSBP4-204ENST00000597724 FLYWCH1Q4VC44 716 aa15.16■□□□□ 0.02
SSBP4-204ENST00000597724 KLHL26Q53HC5 615 aa15.16■□□□□ 0.02
SSBP4-204ENST00000597724 SP5Q6BEB4 398 aaPredicted RBP15.16■□□□□ 0.02
SSBP4-204ENST00000597724 HEPHL1Q6MZM0 1159 aa15.16■□□□□ 0.02
SSBP4-204ENST00000597724 AAGABQ6PD74 315 aa15.16■□□□□ 0.02
SSBP4-204ENST00000597724 ENPP6Q6UWR7 440 aa15.16■□□□□ 0.02
SSBP4-204ENST00000597724 ZNF621Q6ZSS3 439 aa15.16■□□□□ 0.02
SSBP4-204ENST00000597724 SEM1Q6ZVN7 128 aa15.16■□□□□ 0.02
SSBP4-204ENST00000597724 CCDC71Q8IV32 467 aaPredicted RBP15.16■□□□□ 0.02
SSBP4-204ENST00000597724 GATSQ8NAP1 163 aa15.16■□□□□ 0.02
SSBP4-204ENST00000597724 CA5BP1Q8WTZ4 195 aa15.16■□□□□ 0.02
SSBP4-204ENST00000597724 SFXN2Q96NB2 322 aa15.16■□□□□ 0.02
SSBP4-204ENST00000597724 EXD2Q9NVH0 621 aa15.16■□□□□ 0.02
SSBP4-204ENST00000597724 RPH3AQ9Y2J0 694 aaPredicted RBP15.16■□□□□ 0.02
SSBP4-204ENST00000597724 ARHGAP21Q5T5U3 1957 aa15.16■□□□□ 0.02
SSBP4-204ENST00000597724 CACNA1CQ13936 2221 aa15.16■□□□□ 0.02
SSBP4-204ENST00000597724 NPIPA5A0A0B4J1W7 369 aa15.15■□□□□ 0.02
SSBP4-204ENST00000597724 FAM234BA2RU67 622 aa15.15■□□□□ 0.02
SSBP4-204ENST00000597724 KDM4EB2RXH2 506 aaPredicted RBP15.15■□□□□ 0.02
SSBP4-204ENST00000597724 NPIPA7E9PJI5 369 aa15.15■□□□□ 0.02
SSBP4-204ENST00000597724 RFXANKO14593 260 aa15.15■□□□□ 0.02
SSBP4-204ENST00000597724 GSNP06396 782 aa15.15■□□□□ 0.02
SSBP4-204ENST00000597724 NPIPA8P0DM63 369 aa15.15■□□□□ 0.02
SSBP4-204ENST00000597724 OR12D1P0DN82 309 aa15.15■□□□□ 0.02
SSBP4-204ENST00000597724 GRNP28799 593 aaKnown RBP15.15■□□□□ 0.02
SSBP4-204ENST00000597724 ADH7P40394 386 aa15.15■□□□□ 0.02
SSBP4-204ENST00000597724 STARP49675 285 aa15.15■□□□□ 0.02
SSBP4-204ENST00000597724 CD226Q15762 336 aa15.15■□□□□ 0.02
SSBP4-204ENST00000597724 GLYR1Q49A26 553 aaPredicted RBP15.15■□□□□ 0.02
SSBP4-204ENST00000597724 RIPPLY2Q5TAB7 128 aa15.15■□□□□ 0.02
SSBP4-204ENST00000597724 AP1ARQ63HQ0 302 aa15.15■□□□□ 0.02
SSBP4-204ENST00000597724 MSANTD1Q6ZTZ1 278 aa15.15■□□□□ 0.02
SSBP4-204ENST00000597724 MTERF4Q7Z6M4 381 aaKnown RBP15.15■□□□□ 0.02
SSBP4-204ENST00000597724 MISPQ8IVT2 679 aa15.15■□□□□ 0.02
SSBP4-204ENST00000597724 ZNF527Q8NB42 609 aa15.15■□□□□ 0.02
SSBP4-204ENST00000597724 OR10Q1Q8NGQ4 319 aa15.15■□□□□ 0.02
SSBP4-204ENST00000597724 LILRB4Q8NHJ6 448 aa15.15■□□□□ 0.02
SSBP4-204ENST00000597724 ZPLD1Q8TCW7 415 aa15.15■□□□□ 0.02
SSBP4-204ENST00000597724 XAGE5Q8WWM1 108 aa15.15■□□□□ 0.02
SSBP4-204ENST00000597724 STON2Q8WXE9 905 aa15.15■□□□□ 0.02
SSBP4-204ENST00000597724 RAB8BQ92930 207 aa15.15■□□□□ 0.02
SSBP4-204ENST00000597724 VPS33AQ96AX1 596 aa15.15■□□□□ 0.02
SSBP4-204ENST00000597724 ITPR2Q14571 2701 aa15.14■□□□□ 0.01
SSBP4-204ENST00000597724 A0A0G2JNJ9 132 aa15.14■□□□□ 0.01
SSBP4-204ENST00000597724 OR2M5A3KFT3 312 aa15.14■□□□□ 0.01
SSBP4-204ENST00000597724 CYSRT1A8MQ03 144 aa15.14■□□□□ 0.01
SSBP4-204ENST00000597724 FAM47E-STBD1D6RA91 191 aa15.14■□□□□ 0.01
SSBP4-204ENST00000597724 HMGN4O00479 90 aa15.14■□□□□ 0.01
SSBP4-204ENST00000597724 GMFGO60234 142 aa15.14■□□□□ 0.01
SSBP4-204ENST00000597724 FCMRO60667 390 aa15.14■□□□□ 0.01
SSBP4-204ENST00000597724 STX11O75558 287 aa15.14■□□□□ 0.01
SSBP4-204ENST00000597724 TOXO94900 526 aa15.14■□□□□ 0.01
SSBP4-204ENST00000597724 ZCCHC18P0CG32 403 aa15.14■□□□□ 0.01
SSBP4-204ENST00000597724 KHKP50053 298 aa15.14■□□□□ 0.01
SSBP4-204ENST00000597724 STX1BP61266 288 aa15.14■□□□□ 0.01
SSBP4-204ENST00000597724 IRX1P78414 480 aaPredicted RBP15.14■□□□□ 0.01
SSBP4-204ENST00000597724 BCL2A1Q16548 175 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms