RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 WDR45Q9Y484 360 aa17.91■□□□□ 0.46
SHKBP1-214ENST00000597396 MED12Q93074 2177 aa17.9■□□□□ 0.46
SHKBP1-214ENST00000597396 HEATR5AQ86XA9 2040 aa17.9■□□□□ 0.46
SHKBP1-214ENST00000597396 TRGV8A0A0C4DH27 118 aa17.9■□□□□ 0.46
SHKBP1-214ENST00000597396 A0A1W2PQD3 144 aa17.9■□□□□ 0.46
SHKBP1-214ENST00000597396 H3BNH8 94 aa17.9■□□□□ 0.46
SHKBP1-214ENST00000597396 ADAM10O14672 748 aa17.9■□□□□ 0.46
SHKBP1-214ENST00000597396 SUSD5O60279 629 aa17.9■□□□□ 0.46
SHKBP1-214ENST00000597396 SNX3O60493 162 aa17.9■□□□□ 0.46
SHKBP1-214ENST00000597396 TPOP07202 933 aa17.9■□□□□ 0.46
SHKBP1-214ENST00000597396 NR2F1P10589 423 aa17.9■□□□□ 0.46
SHKBP1-214ENST00000597396 ETFAP13804 333 aa17.9■□□□□ 0.46
SHKBP1-214ENST00000597396 HOXB9P17482 250 aaPredicted RBP17.9■□□□□ 0.46
SHKBP1-214ENST00000597396 SRD5A2P31213 254 aa17.9■□□□□ 0.46
SHKBP1-214ENST00000597396 FUT5Q11128 374 aa17.9■□□□□ 0.46
SHKBP1-214ENST00000597396 NFYCQ13952 458 aa17.9■□□□□ 0.46
SHKBP1-214ENST00000597396 MMEL1Q495T6 779 aa17.9■□□□□ 0.46
SHKBP1-214ENST00000597396 YRDCQ86U90 279 aaKnown RBP17.9■□□□□ 0.46
SHKBP1-214ENST00000597396 MISPQ8IVT2 679 aa17.9■□□□□ 0.46
SHKBP1-214ENST00000597396 FAM26EQ8N5C1 309 aa17.9■□□□□ 0.46
SHKBP1-214ENST00000597396 FAM83FQ8NEG4 500 aaPredicted RBP17.9■□□□□ 0.46
SHKBP1-214ENST00000597396 OR2M3Q8NG83 312 aa17.9■□□□□ 0.46
SHKBP1-214ENST00000597396 PHOSPHO1Q8TCT1 267 aa17.9■□□□□ 0.46
SHKBP1-214ENST00000597396 PTGES2Q9H7Z7 377 aa17.9■□□□□ 0.46
SHKBP1-214ENST00000597396 VAPAQ9P0L0 249 aa17.9■□□□□ 0.46
SHKBP1-214ENST00000597396 P2RX2Q9UBL9 471 aa17.9■□□□□ 0.46
SHKBP1-214ENST00000597396 SH3BGRL2Q9UJC5 107 aa17.9■□□□□ 0.46
SHKBP1-214ENST00000597396 ZNF835Q9Y2P0 537 aa17.9■□□□□ 0.46
SHKBP1-214ENST00000597396 RELNP78509 3460 aa17.9■□□□□ 0.46
SHKBP1-214ENST00000597396 A0A1B0GVC2 190 aa17.89■□□□□ 0.45
SHKBP1-214ENST00000597396 TMEM247A6NEH6 219 aa17.89■□□□□ 0.45
SHKBP1-214ENST00000597396 EVPLLA8MZ36 301 aa17.89■□□□□ 0.45
SHKBP1-214ENST00000597396 NPIPA2E9PIF3 369 aa17.89■□□□□ 0.45
SHKBP1-214ENST00000597396 NPIPA3F8WFD2 350 aa17.89■□□□□ 0.45
SHKBP1-214ENST00000597396 AQP7O14520 342 aa17.89■□□□□ 0.45
SHKBP1-214ENST00000597396 PRRG2O14669 202 aa17.89■□□□□ 0.45
SHKBP1-214ENST00000597396 SLC22A2O15244 555 aa17.89■□□□□ 0.45
SHKBP1-214ENST00000597396 GMFGO60234 142 aa17.89■□□□□ 0.45
SHKBP1-214ENST00000597396 FCMRO60667 390 aa17.89■□□□□ 0.45
SHKBP1-214ENST00000597396 H6PDO95479 791 aa17.89■□□□□ 0.45
SHKBP1-214ENST00000597396 STSP08842 583 aa17.89■□□□□ 0.45
SHKBP1-214ENST00000597396 DPP4P27487 766 aa17.89■□□□□ 0.45
SHKBP1-214ENST00000597396 GCKP35557 465 aa17.89■□□□□ 0.45
SHKBP1-214ENST00000597396 MVDP53602 400 aa17.89■□□□□ 0.45
SHKBP1-214ENST00000597396 FADDQ13158 208 aa17.89■□□□□ 0.45
SHKBP1-214ENST00000597396 RGNQ15493 299 aa17.89■□□□□ 0.45
SHKBP1-214ENST00000597396 SYPL1Q16563 259 aa17.89■□□□□ 0.45
SHKBP1-214ENST00000597396 EIPR1Q53HC9 387 aa17.89■□□□□ 0.45
SHKBP1-214ENST00000597396 WIPI1Q5MNZ9 446 aaPredicted RBP17.89■□□□□ 0.45
SHKBP1-214ENST00000597396 C1QL3Q5VWW1 255 aa17.89■□□□□ 0.45
SHKBP1-214ENST00000597396 FGD2Q7Z6J4 655 aa17.89■□□□□ 0.45
SHKBP1-214ENST00000597396 RETREG3Q86VR2 466 aa17.89■□□□□ 0.45
SHKBP1-214ENST00000597396 CHERPQ8IWX8 916 aaKnown RBP17.89■□□□□ 0.45
SHKBP1-214ENST00000597396 MSRB3Q8IXL7 192 aa17.89■□□□□ 0.45
SHKBP1-214ENST00000597396 ZNF619Q8N2I2 560 aa17.89■□□□□ 0.45
SHKBP1-214ENST00000597396 DPP10Q8N608 796 aa17.89■□□□□ 0.45
SHKBP1-214ENST00000597396 ANKFN1Q8N957 763 aa17.89■□□□□ 0.45
SHKBP1-214ENST00000597396 FADS6Q8N9I5 356 aa17.89■□□□□ 0.45
SHKBP1-214ENST00000597396 OR14L1PQ8NHC6 308 aa17.89■□□□□ 0.45
SHKBP1-214ENST00000597396 NEIL3Q8TAT5 605 aa17.89■□□□□ 0.45
SHKBP1-214ENST00000597396 FAM57AQ8TBR7 257 aa17.89■□□□□ 0.45
SHKBP1-214ENST00000597396 SARAFQ96BY9 339 aa17.89■□□□□ 0.45
SHKBP1-214ENST00000597396 TRNT1Q96Q11 434 aaKnown RBP17.89■□□□□ 0.45
SHKBP1-214ENST00000597396 OR2B2Q9GZK3 357 aa17.89■□□□□ 0.45
SHKBP1-214ENST00000597396 THUMPD1Q9NXG2 353 aaKnown RBP17.89■□□□□ 0.45
SHKBP1-214ENST00000597396 ARMCX1Q9P291 453 aa17.89■□□□□ 0.45
SHKBP1-214ENST00000597396 CORO2BQ9UQ03 480 aa17.89■□□□□ 0.45
SHKBP1-214ENST00000597396 DTNAQ9Y4J8 743 aa17.89■□□□□ 0.45
SHKBP1-214ENST00000597396 COL12A1Q99715 3063 aa17.88■□□□□ 0.45
SHKBP1-214ENST00000597396 C15orf38-AP3S2A0A0A6YYH1 394 aa17.88■□□□□ 0.45
SHKBP1-214ENST00000597396 PRAMEF27A3QJZ7 478 aa17.88■□□□□ 0.45
SHKBP1-214ENST00000597396 CLEC18AA5D8T8 446 aa17.88■□□□□ 0.45
SHKBP1-214ENST00000597396 OR14I1A6ND48 311 aa17.88■□□□□ 0.45
SHKBP1-214ENST00000597396 NPIPB9F8W1W9 429 aa17.88■□□□□ 0.45
SHKBP1-214ENST00000597396 GTPBP1O00178 669 aaKnown RBP17.88■□□□□ 0.45
SHKBP1-214ENST00000597396 KIAA0513O60268 411 aa17.88■□□□□ 0.45
SHKBP1-214ENST00000597396 GUSBP08236 651 aa17.88■□□□□ 0.45
SHKBP1-214ENST00000597396 TCEA1P23193 301 aaKnown RBP17.88■□□□□ 0.45
SHKBP1-214ENST00000597396 RNF144AP50876 292 aaPredicted RBP17.88■□□□□ 0.45
SHKBP1-214ENST00000597396 DSCR4P56555 118 aaPredicted RBP17.88■□□□□ 0.45
SHKBP1-214ENST00000597396 C3AR1Q16581 482 aa17.88■□□□□ 0.45
SHKBP1-214ENST00000597396 ZNF630Q2M218 657 aaPredicted RBP17.88■□□□□ 0.45
SHKBP1-214ENST00000597396 KLHL26Q53HC5 615 aa17.88■□□□□ 0.45
SHKBP1-214ENST00000597396 PDZK1Q5T2W1 519 aa17.88■□□□□ 0.45
SHKBP1-214ENST00000597396 TYW3Q6IPR3 259 aaKnown RBP17.88■□□□□ 0.45
SHKBP1-214ENST00000597396 CLEC18BQ6UXF7 455 aa17.88■□□□□ 0.45
SHKBP1-214ENST00000597396 DLEU7Q6UYE1 221 aa17.88■□□□□ 0.45
SHKBP1-214ENST00000597396 FRRS1Q6ZNA5 592 aa17.88■□□□□ 0.45
SHKBP1-214ENST00000597396 Q6ZPB1 254 aaPredicted RBP17.88■□□□□ 0.45
SHKBP1-214ENST00000597396 LRRC74BQ6ZQY2 392 aa17.88■□□□□ 0.45
SHKBP1-214ENST00000597396 MTERF4Q7Z6M4 381 aaKnown RBP17.88■□□□□ 0.45
SHKBP1-214ENST00000597396 CD163Q86VB7 1156 aa17.88■□□□□ 0.45
SHKBP1-214ENST00000597396 SNX32Q86XE0 403 aa17.88■□□□□ 0.45
SHKBP1-214ENST00000597396 CLEC18CQ8NCF0 446 aa17.88■□□□□ 0.45
SHKBP1-214ENST00000597396 SH3YL1Q96HL8 342 aaPredicted RBP17.88■□□□□ 0.45
SHKBP1-214ENST00000597396 FAM53CQ9NYF3 392 aa17.88■□□□□ 0.45
SHKBP1-214ENST00000597396 TAS2R10Q9NYW0 307 aa17.88■□□□□ 0.45
SHKBP1-214ENST00000597396 SPRR3Q9UBC9 169 aa17.88■□□□□ 0.45
SHKBP1-214ENST00000597396 TINAGQ9UJW2 476 aa17.88■□□□□ 0.45
SHKBP1-214ENST00000597396 ACAD8Q9UKU7 415 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms