RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 GSTO2Q9H4Y5 243 aa9.46□□□□□ -0.9
CHMP2A-202ENST00000596708 C12orf49Q9H741 205 aa9.46□□□□□ -0.9
CHMP2A-202ENST00000596708 RRAGDQ9NQL2 400 aaPredicted RBP9.46□□□□□ -0.9
CHMP2A-202ENST00000596708 WBP11Q9Y2W2 641 aaKnown RBP9.46□□□□□ -0.9
CHMP2A-202ENST00000596708 A0A087WZY1 265 aa9.45□□□□□ -0.9
CHMP2A-202ENST00000596708 IGLV3-32A0A0A0MS00 114 aa9.45□□□□□ -0.9
CHMP2A-202ENST00000596708 UBFD1O14562 309 aaKnown RBP9.45□□□□□ -0.9
CHMP2A-202ENST00000596708 TNFSF11O14788 317 aa9.45□□□□□ -0.9
CHMP2A-202ENST00000596708 HS3ST1O14792 307 aa9.45□□□□□ -0.9
CHMP2A-202ENST00000596708 SS18L1O75177 396 aaPredicted RBP9.45□□□□□ -0.9
CHMP2A-202ENST00000596708 SEC22BO75396 215 aa9.45□□□□□ -0.9
CHMP2A-202ENST00000596708 IGKV1D-16P01601 117 aa9.45□□□□□ -0.9
CHMP2A-202ENST00000596708 MYL2P10916 166 aa9.45□□□□□ -0.9
CHMP2A-202ENST00000596708 PYGBP11216 843 aa9.45□□□□□ -0.9
CHMP2A-202ENST00000596708 NID1P14543 1247 aa9.45□□□□□ -0.9
CHMP2A-202ENST00000596708 HPGDP15428 266 aa9.45□□□□□ -0.9
CHMP2A-202ENST00000596708 ZNF17P17021 662 aa9.45□□□□□ -0.9
CHMP2A-202ENST00000596708 ME2P23368 584 aa9.45□□□□□ -0.9
CHMP2A-202ENST00000596708 ECHS1P30084 290 aa9.45□□□□□ -0.9
CHMP2A-202ENST00000596708 ZNF41P51814 821 aaPredicted RBP9.45□□□□□ -0.9
CHMP2A-202ENST00000596708 RAC1P63000 192 aa9.45□□□□□ -0.9
CHMP2A-202ENST00000596708 SLC29A2Q14542 456 aa9.45□□□□□ -0.9
CHMP2A-202ENST00000596708 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.45□□□□□ -0.9
CHMP2A-202ENST00000596708 TMEM44Q2T9K0 475 aa9.45□□□□□ -0.9
CHMP2A-202ENST00000596708 VPS26BQ4G0F5 336 aa9.45□□□□□ -0.9
CHMP2A-202ENST00000596708 CPTPQ5TA50 214 aa9.45□□□□□ -0.9
CHMP2A-202ENST00000596708 GTF2IRD2BQ6EKJ0 949 aa9.45□□□□□ -0.9
CHMP2A-202ENST00000596708 NOXRED1Q6NXP6 359 aa9.45□□□□□ -0.9
CHMP2A-202ENST00000596708 FIGNL1Q6PIW4 674 aa9.45□□□□□ -0.9
CHMP2A-202ENST00000596708 GTF2IRD2Q86UP8 949 aa9.45□□□□□ -0.9
CHMP2A-202ENST00000596708 ZNF611Q8N823 705 aa9.45□□□□□ -0.9
CHMP2A-202ENST00000596708 NOA1Q8NC60 698 aaKnown RBP9.45□□□□□ -0.9
CHMP2A-202ENST00000596708 NUP43Q8NFH3 380 aa9.45□□□□□ -0.9
CHMP2A-202ENST00000596708 OR2V1Q8NHB1 315 aa9.45□□□□□ -0.9
CHMP2A-202ENST00000596708 CEP70Q8NHQ1 597 aa9.45□□□□□ -0.9
CHMP2A-202ENST00000596708 FAM76AQ8TAV0 307 aa9.45□□□□□ -0.9
CHMP2A-202ENST00000596708 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.45□□□□□ -0.9
CHMP2A-202ENST00000596708 AKAP1Q92667 903 aaKnown RBP eCLIP9.45□□□□□ -0.9
CHMP2A-202ENST00000596708 CCDC126Q96EE4 140 aa9.45□□□□□ -0.9
CHMP2A-202ENST00000596708 EGLN2Q96KS0 407 aa9.45□□□□□ -0.9
CHMP2A-202ENST00000596708 TACO1Q9BSH4 297 aaKnown RBP9.45□□□□□ -0.9
CHMP2A-202ENST00000596708 IQCGQ9H095 443 aaKnown RBP9.45□□□□□ -0.9
CHMP2A-202ENST00000596708 TMEM185BQ9H7F4 350 aa9.45□□□□□ -0.9
CHMP2A-202ENST00000596708 HHATLQ9HCP6 504 aa9.45□□□□□ -0.9
CHMP2A-202ENST00000596708 GLRX2Q9NS18 164 aa9.45□□□□□ -0.9
CHMP2A-202ENST00000596708 TBK1Q9UHD2 729 aa9.45□□□□□ -0.9
CHMP2A-202ENST00000596708 DCDC2Q9UHG0 476 aa9.45□□□□□ -0.9
CHMP2A-202ENST00000596708 LAMP3Q9UQV4 416 aa9.45□□□□□ -0.9
CHMP2A-202ENST00000596708 GPR52Q9Y2T5 361 aa9.45□□□□□ -0.9
CHMP2A-202ENST00000596708 DNHD1Q96M86 4753 aa9.44□□□□□ -0.9
CHMP2A-202ENST00000596708 A0A0J9YW62 118 aa9.44□□□□□ -0.9
CHMP2A-202ENST00000596708 A0A1W2PRB8 838 aa9.44□□□□□ -0.9
CHMP2A-202ENST00000596708 ALG1L2C9J202 215 aa9.44□□□□□ -0.9
CHMP2A-202ENST00000596708 PDPK1O15530 556 aa9.44□□□□□ -0.9
CHMP2A-202ENST00000596708 TMCC2O75069 709 aa9.44□□□□□ -0.9
CHMP2A-202ENST00000596708 RSL1D1O76021 490 aaKnown RBP9.44□□□□□ -0.9
CHMP2A-202ENST00000596708 NKX2-2O95096 273 aa9.44□□□□□ -0.9
CHMP2A-202ENST00000596708 OXSR1O95747 527 aaPredicted RBP9.44□□□□□ -0.9
CHMP2A-202ENST00000596708 TUBBP07437 444 aa9.44□□□□□ -0.9
CHMP2A-202ENST00000596708 ABHD2P08910 425 aa9.44□□□□□ -0.9
CHMP2A-202ENST00000596708 PAX1P15863 534 aa9.44□□□□□ -0.9
CHMP2A-202ENST00000596708 MANFP55145 182 aaKnown RBP9.44□□□□□ -0.9
CHMP2A-202ENST00000596708 SLC18A2Q05940 514 aa9.44□□□□□ -0.9
CHMP2A-202ENST00000596708 TNK1Q13470 666 aa9.44□□□□□ -0.9
CHMP2A-202ENST00000596708 GLE1Q53GS7 698 aaKnown RBP9.44□□□□□ -0.9
CHMP2A-202ENST00000596708 CFAP157Q5JU67 520 aa9.44□□□□□ -0.9
CHMP2A-202ENST00000596708 HBMQ6B0K9 141 aa9.44□□□□□ -0.9
CHMP2A-202ENST00000596708 ANKRD26P1Q6NSI1 321 aa9.44□□□□□ -0.9
CHMP2A-202ENST00000596708 MFSD12Q6NUT3 480 aa9.44□□□□□ -0.9
CHMP2A-202ENST00000596708 ESPNLQ6ZVH7 1005 aa9.44□□□□□ -0.9
CHMP2A-202ENST00000596708 IKBIPQ70UQ0 350 aa9.44□□□□□ -0.9
CHMP2A-202ENST00000596708 TRIM46Q7Z4K8 759 aa9.44□□□□□ -0.9
CHMP2A-202ENST00000596708 GTPBP8Q8N3Z3 284 aaPredicted RBP9.44□□□□□ -0.9
CHMP2A-202ENST00000596708 CDRT4Q8N9R6 151 aa9.44□□□□□ -0.9
CHMP2A-202ENST00000596708 MNS1Q8NEH6 495 aa9.44□□□□□ -0.9
CHMP2A-202ENST00000596708 OR4C3Q8NH37 302 aa9.44□□□□□ -0.9
CHMP2A-202ENST00000596708 ZFP28Q8NHY6 868 aa9.44□□□□□ -0.9
CHMP2A-202ENST00000596708 FBXO30Q8TB52 745 aa9.44□□□□□ -0.9
CHMP2A-202ENST00000596708 ACMSDQ8TDX5 336 aa9.44□□□□□ -0.9
CHMP2A-202ENST00000596708 ROBO4Q8WZ75 1007 aa9.44□□□□□ -0.9
CHMP2A-202ENST00000596708 OSTF1Q92882 214 aa9.44□□□□□ -0.9
CHMP2A-202ENST00000596708 CIDECQ96AQ7 238 aaPredicted RBP9.44□□□□□ -0.9
CHMP2A-202ENST00000596708 ZBTB8AQ96BR9 441 aa9.44□□□□□ -0.9
CHMP2A-202ENST00000596708 TRMT61AQ96FX7 289 aaKnown RBP9.44□□□□□ -0.9
CHMP2A-202ENST00000596708 SH3YL1Q96HL8 342 aaPredicted RBP9.44□□□□□ -0.9
CHMP2A-202ENST00000596708 REXO5Q96IC2 774 aaKnown RBP9.44□□□□□ -0.9
CHMP2A-202ENST00000596708 ADGRG7Q96K78 797 aa9.44□□□□□ -0.9
CHMP2A-202ENST00000596708 C16orf45Q96MC5 204 aaPredicted RBP9.44□□□□□ -0.9
CHMP2A-202ENST00000596708 RNF145Q96MT1 663 aa9.44□□□□□ -0.9
CHMP2A-202ENST00000596708 NPAS1Q99742 590 aa9.44□□□□□ -0.9
CHMP2A-202ENST00000596708 ZNF701Q9NV72 531 aaPredicted RBP9.44□□□□□ -0.9
CHMP2A-202ENST00000596708 MED17Q9NVC6 651 aa9.44□□□□□ -0.9
CHMP2A-202ENST00000596708 SH3BP4Q9P0V3 963 aa9.44□□□□□ -0.9
CHMP2A-202ENST00000596708 SONP18583 2426 aaKnown RBP9.43□□□□□ -0.9
CHMP2A-202ENST00000596708 H3BQF6 201 aa9.43□□□□□ -0.9
CHMP2A-202ENST00000596708 SCDO00767 359 aa9.43□□□□□ -0.9
CHMP2A-202ENST00000596708 ADAMDEC1O15204 470 aa9.43□□□□□ -0.9
CHMP2A-202ENST00000596708 AKAP10O43572 662 aa9.43□□□□□ -0.9
CHMP2A-202ENST00000596708 IFI6P09912 130 aa9.43□□□□□ -0.9
CHMP2A-202ENST00000596708 PABPC4LP0CB38 370 aaKnown RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms