RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 C3P1Q6ZMU1 363 aa15.71■□□□□ 0.11
SHKBP1-212ENST00000596163 OR9I1Q8NGQ6 314 aa15.71■□□□□ 0.11
SHKBP1-212ENST00000596163 OIT3Q8WWZ8 545 aa15.71■□□□□ 0.11
SHKBP1-212ENST00000596163 THOC1Q96FV9 657 aaKnown RBP15.71■□□□□ 0.11
SHKBP1-212ENST00000596163 SFXN2Q96NB2 322 aa15.71■□□□□ 0.11
SHKBP1-212ENST00000596163 UGT2B28Q9BY64 529 aa15.71■□□□□ 0.11
SHKBP1-212ENST00000596163 POLE3Q9NRF9 147 aa15.71■□□□□ 0.11
SHKBP1-212ENST00000596163 TNFRSF10DQ9UBN6 386 aa15.71■□□□□ 0.11
SHKBP1-212ENST00000596163 LIPT1Q9Y234 373 aa15.71■□□□□ 0.11
SHKBP1-212ENST00000596163 NINQ8N4C6 2090 aa15.71■□□□□ 0.1
SHKBP1-212ENST00000596163 RELNP78509 3460 aa15.7■□□□□ 0.1
SHKBP1-212ENST00000596163 EML6Q6ZMW3 1958 aa15.7■□□□□ 0.1
SHKBP1-212ENST00000596163 HK1P19367 917 aa15.7■□□□□ 0.1
SHKBP1-212ENST00000596163 CHMP24386 653 aa15.7■□□□□ 0.1
SHKBP1-212ENST00000596163 DCTP40126 519 aa15.7■□□□□ 0.1
SHKBP1-212ENST00000596163 MDH1P40925 334 aaKnown RBP15.7■□□□□ 0.1
SHKBP1-212ENST00000596163 CDKN2CP42773 168 aa15.7■□□□□ 0.1
SHKBP1-212ENST00000596163 ZFP36L2P47974 494 aaKnown RBP15.7■□□□□ 0.1
SHKBP1-212ENST00000596163 HPCAP84074 193 aa15.7■□□□□ 0.1
SHKBP1-212ENST00000596163 GUCY1A3Q02108 690 aa15.7■□□□□ 0.1
SHKBP1-212ENST00000596163 C1orf185Q5T7R7 199 aa15.7■□□□□ 0.1
SHKBP1-212ENST00000596163 HEPHL1Q6MZM0 1159 aa15.7■□□□□ 0.1
SHKBP1-212ENST00000596163 BLOC1S3Q6QNY0 202 aa15.7■□□□□ 0.1
SHKBP1-212ENST00000596163 ZAR1Q86SH2 424 aa15.7■□□□□ 0.1
SHKBP1-212ENST00000596163 RNF130Q86XS8 419 aa15.7■□□□□ 0.1
SHKBP1-212ENST00000596163 RFWD2Q8NHY2 731 aa15.7■□□□□ 0.1
SHKBP1-212ENST00000596163 RND1Q92730 232 aa15.7■□□□□ 0.1
SHKBP1-212ENST00000596163 VPS33AQ96AX1 596 aa15.7■□□□□ 0.1
SHKBP1-212ENST00000596163 NMUR2Q9GZQ4 415 aa15.7■□□□□ 0.1
SHKBP1-212ENST00000596163 PRDM14Q9GZV8 571 aa15.7■□□□□ 0.1
SHKBP1-212ENST00000596163 SERHL2Q9H4I8 314 aa15.7■□□□□ 0.1
SHKBP1-212ENST00000596163 CCDC134Q9H6E4 229 aa15.7■□□□□ 0.1
SHKBP1-212ENST00000596163 CCDC167Q9P0B6 97 aa15.7■□□□□ 0.1
SHKBP1-212ENST00000596163 CAMK2AQ9UQM7 478 aa15.7■□□□□ 0.1
SHKBP1-212ENST00000596163 DTNAQ9Y4J8 743 aa15.7■□□□□ 0.1
SHKBP1-212ENST00000596163 HRH3Q9Y5N1 445 aa15.7■□□□□ 0.1
SHKBP1-212ENST00000596163 HIVEP3Q5T1R4 2406 aa15.7■□□□□ 0.1
SHKBP1-212ENST00000596163 LRRK2Q5S007 2527 aa15.7■□□□□ 0.1
SHKBP1-212ENST00000596163 A0A087WZY1 265 aa15.69■□□□□ 0.1
SHKBP1-212ENST00000596163 GTPBP1O00178 669 aaKnown RBP15.69■□□□□ 0.1
SHKBP1-212ENST00000596163 ZIC3O60481 467 aa15.69■□□□□ 0.1
SHKBP1-212ENST00000596163 RNF224P0DH78 156 aa15.69■□□□□ 0.1
SHKBP1-212ENST00000596163 CPN1P15169 458 aa15.69■□□□□ 0.1
SHKBP1-212ENST00000596163 CASP9P55211 416 aa15.69■□□□□ 0.1
SHKBP1-212ENST00000596163 ADORA2A-AS1P86434 159 aa15.69■□□□□ 0.1
SHKBP1-212ENST00000596163 RCAN2Q14206 197 aa15.69■□□□□ 0.1
SHKBP1-212ENST00000596163 AGKQ53H12 422 aa15.69■□□□□ 0.1
SHKBP1-212ENST00000596163 KLHL26Q53HC5 615 aa15.69■□□□□ 0.1
SHKBP1-212ENST00000596163 MAMDC2Q7Z304 686 aaPredicted RBP15.69■□□□□ 0.1
SHKBP1-212ENST00000596163 ULK2Q8IYT8 1036 aa15.69■□□□□ 0.1
SHKBP1-212ENST00000596163 PHOSPHO1Q8TCT1 267 aa15.69■□□□□ 0.1
SHKBP1-212ENST00000596163 ZFP90Q8TF47 636 aa15.69■□□□□ 0.1
SHKBP1-212ENST00000596163 ITLN2Q8WWU7 325 aaPredicted RBP15.69■□□□□ 0.1
SHKBP1-212ENST00000596163 ASB5Q8WWX0 329 aa15.69■□□□□ 0.1
SHKBP1-212ENST00000596163 GTF2H4Q92759 462 aa15.69■□□□□ 0.1
SHKBP1-212ENST00000596163 ROPN1LQ96C74 230 aa15.69■□□□□ 0.1
SHKBP1-212ENST00000596163 SPDL1Q96EA4 605 aa15.69■□□□□ 0.1
SHKBP1-212ENST00000596163 C1GALT1C1Q96EU7 318 aa15.69■□□□□ 0.1
SHKBP1-212ENST00000596163 PIGQQ9BRB3 760 aa15.69■□□□□ 0.1
SHKBP1-212ENST00000596163 RTN4RQ9BZR6 473 aa15.69■□□□□ 0.1
SHKBP1-212ENST00000596163 RAD21L1Q9H4I0 556 aa15.69■□□□□ 0.1
SHKBP1-212ENST00000596163 FGFR1OP2Q9NVK5 253 aa15.69■□□□□ 0.1
SHKBP1-212ENST00000596163 THUMPD1Q9NXG2 353 aaKnown RBP15.69■□□□□ 0.1
SHKBP1-212ENST00000596163 STOML1Q9UBI4 398 aa15.69■□□□□ 0.1
SHKBP1-212ENST00000596163 EXPH5Q8NEV8 1989 aa15.69■□□□□ 0.1
SHKBP1-212ENST00000596163 USP9XQ93008 2570 aaPredicted RBP15.68■□□□□ 0.1
SHKBP1-212ENST00000596163 NR5A2O00482 541 aa15.68■□□□□ 0.1
SHKBP1-212ENST00000596163 GP1BBP13224 206 aa15.68■□□□□ 0.1
SHKBP1-212ENST00000596163 ARFIP2P53365 341 aa15.68■□□□□ 0.1
SHKBP1-212ENST00000596163 GFRA1P56159 465 aa15.68■□□□□ 0.1
SHKBP1-212ENST00000596163 PMPCAQ10713 525 aa15.68■□□□□ 0.1
SHKBP1-212ENST00000596163 ART3Q13508 389 aa15.68■□□□□ 0.1
SHKBP1-212ENST00000596163 GPR68Q15743 365 aa15.68■□□□□ 0.1
SHKBP1-212ENST00000596163 BCL2A1Q16548 175 aa15.68■□□□□ 0.1
SHKBP1-212ENST00000596163 GPAT3Q53EU6 434 aa15.68■□□□□ 0.1
SHKBP1-212ENST00000596163 RAET1LQ5VY80 246 aa15.68■□□□□ 0.1
SHKBP1-212ENST00000596163 FUNDC1Q8IVP5 155 aa15.68■□□□□ 0.1
SHKBP1-212ENST00000596163 ZNF614Q8N883 585 aa15.68■□□□□ 0.1
SHKBP1-212ENST00000596163 GATSQ8NAP1 163 aa15.68■□□□□ 0.1
SHKBP1-212ENST00000596163 B4GALNT2Q8NHY0 566 aa15.68■□□□□ 0.1
SHKBP1-212ENST00000596163 PMM1Q92871 262 aa15.68■□□□□ 0.1
SHKBP1-212ENST00000596163 RAB8BQ92930 207 aa15.68■□□□□ 0.1
SHKBP1-212ENST00000596163 WDYHV1Q96HA8 205 aa15.68■□□□□ 0.1
SHKBP1-212ENST00000596163 TRNT1Q96Q11 434 aaKnown RBP15.68■□□□□ 0.1
SHKBP1-212ENST00000596163 TMEM120AQ9BXJ8 343 aa15.68■□□□□ 0.1
SHKBP1-212ENST00000596163 ZNF350Q9GZX5 532 aa15.68■□□□□ 0.1
SHKBP1-212ENST00000596163 TPT1P8Q9HAU6 139 aa15.68■□□□□ 0.1
SHKBP1-212ENST00000596163 PLEKHB1Q9UF11 243 aaPredicted RBP15.68■□□□□ 0.1
SHKBP1-212ENST00000596163 RPH3AQ9Y2J0 694 aaPredicted RBP15.68■□□□□ 0.1
SHKBP1-212ENST00000596163 WDR45Q9Y484 360 aa15.68■□□□□ 0.1
SHKBP1-212ENST00000596163 A0A096LPI6 279 aa15.67■□□□□ 0.1
SHKBP1-212ENST00000596163 A1L4Q6 167 aa15.67■□□□□ 0.1
SHKBP1-212ENST00000596163 TMEM247A6NEH6 219 aa15.67■□□□□ 0.1
SHKBP1-212ENST00000596163 NPIPB9F8W1W9 429 aa15.67■□□□□ 0.1
SHKBP1-212ENST00000596163 HMGN4O00479 90 aa15.67■□□□□ 0.1
SHKBP1-212ENST00000596163 HCRTR2O43614 444 aa15.67■□□□□ 0.1
SHKBP1-212ENST00000596163 EIF4E2O60573 245 aaKnown RBP15.67■□□□□ 0.1
SHKBP1-212ENST00000596163 EPPINO95925 133 aa15.67■□□□□ 0.1
SHKBP1-212ENST00000596163 PEPDP12955 493 aa15.67■□□□□ 0.1
SHKBP1-212ENST00000596163 CRATP43155 626 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms